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SummaryGeometryRelated PDB entries

BI2

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CBDNBCsing1.47Å1.48Å
CBDHBD1sing1.09Å1.12Å
CBDHBD2sing1.09Å1.11Å
CBDHBD3sing1.09Å1.11Å
NBCCBGsing1.47Å1.49Å
NBCCBBsing1.48Å1.49Å
CBGCBFsing1.54Å1.55Å
CBGHBG1sing1.09Å1.11Å
CBGHBG2sing1.09Å1.11Å
CBFCBEsing1.55Å1.53Å
CBFHBF1sing1.09Å1.12Å
CBFHBF2sing1.09Å1.12Å
CBECBBsing1.55Å1.54Å
CBEHBE1sing1.09Å1.12Å
CBEHBE2sing1.09Å1.11Å
CBBCBAsing1.53Å1.54Å
CBBHBBsing1.09Å1.11Å
CBACAYsing1.53Å1.50Å
CBAHBA1sing1.09Å1.11Å
CBAHBA2sing1.09Å1.11Å
CAYNAHsing1.46Å1.47Å
CAYHAY1sing1.09Å1.12Å
CAYHAY2sing1.09Å1.12Å
NAHCAWsing1.36Å1.33ÅAromatic
NAHCAEsing1.38Å1.31ÅAromatic
CAWCAGdoub1.36Å1.33ÅAromatic
CAWHAWsing1.08Å1.10Å
CAECAFsing1.39Å1.38ÅAromatic
CAECADdoub1.40Å1.40ÅAromatic
CAFCAAdoub1.38Å1.38ÅAromatic
CAFHAFsing1.08Å1.10Å
CAACABsing1.39Å1.40ÅAromatic
CAAHAAsing1.08Å1.10Å
CABCACdoub1.38Å1.38ÅAromatic
CABHABsing1.08Å1.10Å
CACCADsing1.39Å1.38ÅAromatic
CACHACsing1.08Å1.10Å
CADCAGsing1.47Å1.40ÅAromatic
CAGCAIsing1.47Å1.42Å
CAICATsing1.48Å1.40Å
CAICAJdoub1.39Å1.41Å
CATOAZdoub1.22Å1.24Å
CATNAUsing1.34Å1.37Å
NAUCAVsing1.34Å1.33Å
NAUHAUsing0.97Å1.02Å
CAVOAXdoub1.21Å1.23Å
CAVCAJsing1.48Å1.41Å
CAJCAKsing1.47Å1.42Å
CAKCAMsing1.47Å1.40ÅAromatic
CAKCALdoub1.36Å1.34ÅAromatic
CAMCAPsing1.39Å1.40ÅAromatic
CAMCANdoub1.40Å1.38ÅAromatic
CAPCAQdoub1.38Å1.41ÅAromatic
CAPHAPsing1.08Å1.10Å
CAQCARsing1.39Å1.39ÅAromatic
CAQHAQsing1.08Å1.10Å
CARCASdoub1.38Å1.39ÅAromatic
CARHARsing1.08Å1.10Å
CASCANsing1.39Å1.40ÅAromatic
CASHASsing1.08Å1.10Å
CANNAOsing1.38Å1.33ÅAromatic
NAOCALsing1.36Å1.31ÅAromatic
NAOHAOsing0.97Å1.02Å
CALHALsing1.08Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
NBCCBDHBD1113.4°109.5°
NBCCBDHBD2110.8°109.4°
NBCCBDHBD3110.8°109.4°
CBDNBCCBG113.4°106.7°
CBDNBCCBB115.8°106.7°
HBD1CBDHBD2110.8°109.5°
HBD1CBDHBD3110.8°109.5°
HBD2CBDHBD399.5°109.5°
CBGNBCCBB104.3°108.6°
NBCCBGCBF103.8°107.2°
NBCCBGHBG1114.4°109.9°
NBCCBGHBG2114.4°109.9°
NBCCBBCBE102.0°104.8°
NBCCBBCBA114.7°110.5°
NBCCBBHBB110.4°110.4°
CBFCBGHBG1114.4°109.8°
CBFCBGHBG2114.4°109.9°
CBGCBFCBE105.1°103.0°
CBGCBFHBF1113.8°110.7°
CBGCBFHBF2113.8°110.7°
HBG1CBGHBG296.1°110.0°
CBECBFHBF1113.9°110.7°
CBECBFHBF2113.8°110.8°
CBFCBECBB105.2°101.7°
CBFCBEHBE1113.8°111.0°
CBFCBEHBE2113.8°111.0°
HBF1CBFHBF296.6°110.7°
CBBCBEHBE1113.8°111.0°
CBBCBEHBE2113.8°111.0°
CBECBBCBA108.7°110.4°
CBECBBHBB110.4°110.3°
HBE1CBEHBE296.7°110.9°
CBACBBHBB110.4°110.3°
CBBCBACAY113.6°109.5°
CBBCBAHBA1110.7°109.5°
CBBCBAHBA2110.7°109.4°
CAYCBAHBA1110.7°109.5°
CAYCBAHBA2110.7°109.4°
CBACAYNAH108.8°109.5°
CBACAYHAY1112.5°109.5°
CBACAYHAY2112.5°109.4°
HBA1CBAHBA299.6°109.4°
NAHCAYHAY1112.4°109.5°
NAHCAYHAY2112.5°109.4°
CAYNAHCAW124.6°124.9°
CAYNAHCAE124.2°124.8°
HAY1CAYHAY298.0°109.5°
CAWNAHCAE111.3°110.3°
NAHCAWCAG108.8°109.7°
NAHCAWHAW125.6°125.2°
NAHCAECAF131.7°133.2°
NAHCAECAD106.7°107.5°
CAGCAWHAW125.6°125.1°
CAWCAGCAD107.1°106.6°
CAWCAGCAI124.6°126.7°
CAFCAECAD121.5°119.4°
CAECAFCAA118.8°119.9°
CAECAFHAF120.6°120.0°
CAECADCAC118.9°120.1°
CAECADCAG106.1°106.0°
CAACAFHAF120.6°120.1°
CAFCAACAB120.2°120.6°
CAFCAAHAA119.9°119.7°
CABCAAHAA119.9°119.7°
CAACABCAC120.3°120.3°
CAACABHAB119.9°119.8°
CACCABHAB119.9°119.9°
CABCACCAD120.3°119.7°
CABCACHAC119.8°120.1°
CADCACHAC119.8°120.2°
CACCADCAG135.0°134.0°
CADCAGCAI128.0°126.7°
CAGCAICAT124.5°127.0°
CAGCAICAJ129.5°127.0°
CATCAICAJ105.4°106.1°
CAICATOAZ123.4°125.7°
CAICATNAU110.2°108.7°
CAICAJCAV106.3°106.1°
CAICAJCAK130.2°127.0°
OAZCATNAU126.4°125.6°
CATNAUCAV107.7°110.5°
CATNAUHAU126.2°124.8°
CAVNAUHAU126.1°124.7°
NAUCAVOAX125.2°125.7°
NAUCAVCAJ110.3°108.6°
OAXCAVCAJ124.5°125.7°
CAVCAJCAK123.5°126.9°
CAJCAKCAM128.6°126.8°
CAJCAKCAL124.0°126.7°
CAMCAKCAL107.4°106.5°
CAKCAMCAP135.9°133.9°
CAKCAMCAN105.0°106.0°
CAKCALNAO109.4°109.7°
CAKCALHAL125.3°125.2°
CAPCAMCAN119.1°120.1°
CAMCAPCAQ120.4°119.6°
CAMCAPHAP119.8°120.2°
CAMCANCAS120.9°119.4°
CAMCANNAO108.3°107.5°
CAQCAPHAP119.8°120.2°
CAPCAQCAR119.6°120.3°
CAPCAQHAQ120.2°119.8°
CARCAQHAQ120.2°119.9°
CAQCARCAS119.8°120.6°
CAQCARHAR120.1°119.7°
CASCARHAR120.1°119.7°
CARCASCAN120.2°120.0°
CARCASHAS119.9°120.0°
CANCASHAS119.9°120.0°
CASCANNAO130.8°133.1°
CANNAOCAL109.8°110.3°
CANNAOHAO125.7°124.9°
CALNAOHAO124.5°124.8°
NAOCALHAL125.3°125.2°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
NBCCBDHBD1HBD2125.3°120.0°
NBCCBDHBD1HBD3125.3°120.0°
NBCCBDHBD2HBD3116.6°119.9°
CBDNBCCBGCBB126.9°114.7°
CBDNBCCBGCBF167.4°115.6°
CBDNBCCBGHBG167.3°3.7°
CBDNBCCBGHBG242.2°124.9°
CBDNBCCBBCBE169.8°138.7°
CBDNBCCBBCBA52.6°102.3°
CBDNBCCBBHBB72.9°19.9°
HBD1CBDHBD2HBD3116.6°120.1°
HBD1CBDNBCCBG180.0°55.3°
HBD1CBDNBCCBB59.5°60.7°
HBD2CBDNBCCBG54.7°64.7°
HBD2CBDNBCCBB65.8°179.3°
HBD3CBDNBCCBG54.7°175.3°
HBD3CBDNBCCBB175.3°59.4°
NBCCBGCBFHBG1125.3°119.4°
NBCCBGCBFHBG2125.3°119.4°
NBCCBGHBG1HBG2120.3°121.2°
NBCCBGCBFCBE20.1°22.3°
NBCCBGCBFHBF1105.2°96.1°
NBCCBGCBFHBF2145.3°140.8°
CBGNBCCBBCBE44.4°24.1°
CBGNBCCBBCBA72.8°143.0°
CBGNBCCBBHBB161.7°94.7°
CBBNBCCBGCBF40.6°1.0°
CBBNBCCBGHBG1165.8°118.4°
CBBNBCCBGHBG284.7°120.4°
NBCCBBCBECBF30.8°37.0°
NBCCBBCBECBA121.5°119.0°
NBCCBBCBEHBB117.3°118.8°
NBCCBBCBEHBE1156.1°155.2°
NBCCBBCBEHBE294.4°81.1°
NBCCBBCBAHBB125.5°122.3°
NBCCBBCBACAY47.6°64.5°
NBCCBBCBAHBA1172.9°175.4°
NBCCBBCBAHBA277.6°55.4°
CBFCBGHBG1HBG2120.3°121.1°
CBGCBFCBEHBF1125.2°118.4°
CBGCBFCBEHBF2125.3°118.4°
CBGCBFHBF1HBF2119.8°123.1°
CBGCBFCBECBB6.6°35.6°
CBGCBFCBEHBE1131.9°153.7°
CBGCBFCBEHBE2118.6°82.5°
HBG1CBGCBFCBE145.3°141.7°
HBG1CBGCBFHBF120.1°23.3°
HBG1CBGCBFHBF289.4°99.8°
HBG2CBGCBFCBE105.2°97.2°
HBG2CBGCBFHBF1129.5°144.5°
HBG2CBGCBFHBF220.1°21.3°
CBECBFHBF1HBF2119.8°123.3°
CBFCBECBBHBE1125.3°118.1°
CBFCBECBBHBE2125.3°118.1°
CBFCBEHBE1HBE2119.7°123.9°
CBFCBECBBCBA90.7°156.0°
CBFCBECBBHBB148.1°81.8°
HBF1CBFCBECBB131.9°82.8°
HBF1CBFCBEHBE1102.9°35.4°
HBF1CBFCBEHBE26.6°159.2°
HBF2CBFCBECBB118.6°154.0°
HBF2CBFCBEHBE16.6°87.9°
HBF2CBFCBEHBE2116.1°35.9°
CBBCBEHBE1HBE2119.7°123.8°
CBECBBCBAHBB121.2°122.2°
CBECBBCBACAY161.0°180.0°
CBECBBCBAHBA173.7°59.9°
CBECBBCBAHBA235.7°60.0°
HBE1CBECBBCBA34.6°85.8°
HBE1CBECBBHBB86.6°36.4°
HBE2CBECBBCBA144.1°37.9°
HBE2CBECBBHBB22.9°160.1°
CBBCBACAYHBA1125.3°120.1°
CBBCBACAYHBA2125.2°120.0°
CBBCBAHBA1HBA2116.5°120.0°
CBBCBACAYNAH77.0°180.0°
CBBCBACAYHAY1157.7°59.9°
CBBCBACAYHAY248.2°60.0°
HBBCBBCBACAY77.8°57.8°
HBBCBBCBAHBA147.5°62.3°
HBBCBBCBAHBA2156.9°177.7°
CAYCBAHBA1HBA2116.5°119.9°
CBACAYNAHHAY1125.3°120.1°
CBACAYNAHHAY2125.3°120.0°
CBACAYHAY1HAY2118.4°119.9°
CBACAYNAHCAW38.5°90.0°
CBACAYNAHCAE143.0°90.3°
HBA1CBACAYNAH48.3°59.9°
HBA1CBACAYHAY177.0°180.0°
HBA1CBACAYHAY2173.5°60.1°
HBA2CBACAYNAH157.7°60.0°
HBA2CBACAYHAY132.5°60.0°
HBA2CBACAYHAY277.0°180.0°
NAHCAYHAY1HAY2118.4°120.0°
CAYNAHCAWCAE178.7°179.7°
CAYNAHCAWCAG179.8°180.0°
CAYNAHCAWHAW0.2°0.1°
CAYNAHCAECAF0.4°0.6°
CAYNAHCAECAD178.8°179.9°
HAY1CAYNAHCAW86.8°150.0°
HAY1CAYNAHCAE91.7°29.7°
HAY2CAYNAHCAW163.7°30.0°
HAY2CAYNAHCAE17.7°149.7°
NAHCAWCAGHAW180.0°179.9°
CAWNAHCAECAF178.3°179.7°
CAWNAHCAECAD0.1°0.4°
NAHCAWCAGCAD1.7°0.0°
NAHCAWCAGCAI176.9°180.0°
CAENAHCAWCAG1.1°0.3°
CAENAHCAWHAW178.9°179.9°
NAHCAECAFCAD178.2°179.2°
NAHCAECAFCAA179.4°179.7°
NAHCAECAFHAF0.6°0.5°
NAHCAECADCAC179.9°179.8°
NAHCAECADCAG0.9°0.3°
CAWCAGCADCAE1.6°0.2°
CAWCAGCADCAC179.7°180.0°
CAWCAGCADCAI175.1°180.0°
CAWCAGCAICAT136.7°90.3°
CAWCAGCAICAJ33.2°90.0°
HAWCAWCAGCAD178.3°179.9°
HAWCAWCAGCAI3.1°0.1°
CAECAFCAAHAF180.0°179.8°
CAECAFCAACAB1.3°0.2°
CAECAFCAAHAA178.7°179.8°
CAFCAECADCAC1.5°0.5°
CAFCAECADCAG179.5°179.7°
CADCAECAFCAA1.2°0.5°
CADCAECAFHAF178.8°179.7°
CAECADCACCAB1.9°0.2°
CAECADCACCAG178.6°179.7°
CAECADCACHAC178.0°179.7°
CAECADCAGCAI176.6°179.8°
CAFCAACABHAA180.0°180.0°
CAFCAACABCAC1.8°0.0°
CAFCAACABHAB178.2°180.0°
HAFCAFCAACAB178.7°180.0°
HAFCAFCAAHAA1.3°0.0°
CAACABCACHAB180.0°180.0°
CAACABCACCAD2.1°0.0°
CAACABCACHAC177.9°180.0°
HAACAACABCAC178.2°180.0°
HAACAACABHAB1.7°0.0°
CABCACCADHAC180.0°180.0°
CABCACCADCAG179.5°180.0°
HABCABCACCAD177.9°180.0°
HABCABCACHAC2.1°0.0°
CACCADCAGCAI4.6°0.0°
HACCACCADCAG0.5°0.0°
CADCAGCAICAT37.6°89.7°
CADCAGCAICAJ152.6°90.0°
CAGCAICATCAJ171.9°179.7°
CAGCAICATOAZ7.6°0.3°
CAGCAICATNAU175.4°179.8°
CAGCAICAJCAV174.3°180.0°
CAGCAICAJCAK6.7°0.0°
CAICATOAZNAU176.5°179.5°
CAICATNAUCAV2.7°0.5°
CAICATNAUHAU177.3°179.9°
CATCAICAJCAV3.0°0.2°
CATCAICAJCAK178.0°179.8°
CAJCAICATOAZ179.5°180.0°
CAJCAICATNAU3.6°0.4°
CAICAJCAVNAU1.5°0.1°
CAICAJCAVOAX178.4°180.0°
CAICAJCAVCAK179.1°180.0°
CAICAJCAKCAM34.9°90.3°
CAICAJCAKCAL145.8°90.0°
OAZCATNAUCAV179.6°180.0°
OAZCATNAUHAU0.4°0.3°
CATNAUCAVHAU180.0°179.6°
CATNAUCAVOAX179.4°179.7°
CATNAUCAVCAJ0.7°0.3°
NAUCAVOAXCAJ179.8°180.0°
NAUCAVCAJCAK179.4°180.0°
HAUNAUCAVOAX0.6°0.1°
HAUNAUCAVCAJ179.3°180.0°
OAXCAVCAJCAK0.7°0.0°
CAVCAJCAKCAM144.0°89.7°
CAVCAJCAKCAL35.3°90.0°
CAJCAKCAMCAL179.4°179.8°
CAJCAKCAMCAP0.4°0.8°
CAJCAKCAMCAN179.8°179.8°
CAJCAKCALNAO179.8°180.0°
CAJCAKCALHAL0.2°0.0°
CAKCAMCAPCAN179.3°178.9°
CAKCAMCAPCAQ179.6°179.6°
CAKCAMCAPHAP0.3°0.8°
CAKCAMCANCAS179.3°179.8°
CAKCAMCANNAO0.5°0.4°
CAMCAKCALNAO0.8°0.3°
CAMCAKCALHAL179.2°179.7°
CALCAKCAMCAP179.8°179.4°
CALCAKCAMCAN0.8°0.4°
CAKCALNAOCAN0.4°0.0°
CAKCALNAOHAL180.0°180.0°
CAKCALNAOHAO179.6°180.0°
CAMCAPCAQHAP180.0°179.6°
CAMCAPCAQCAR1.0°0.4°
CAMCAPCAQHAQ179.0°179.7°
CAPCAMCANCAS0.2°0.6°
CAPCAMCANNAO179.9°179.6°
CANCAMCAPCAQ0.3°0.7°
CANCAMCAPHAP179.7°179.7°
CAMCANCASCAR0.1°0.3°
CAMCANCASNAO179.8°179.7°
CAMCANCASHAS179.9°179.7°
CAMCANNAOCAL0.1°0.3°
CAMCANNAOHAO179.9°179.7°
CAPCAQCARHAQ180.0°179.9°
CAPCAQCARCAS1.1°0.0°
CAPCAQCARHAR178.9°179.9°
HAPCAPCAQCAR179.0°180.0°
HAPCAPCAQHAQ1.0°0.1°
CAQCARCASHAR180.0°180.0°
CAQCARCASCAN0.5°0.0°
CAQCARCASHAS179.5°180.0°
HAQCAQCARCAS179.0°180.0°
HAQCAQCARHAR1.1°0.0°
CARCASCANHAS180.0°180.0°
CARCASCANNAO179.9°180.0°
HARCARCASCAN179.5°180.0°
HARCARCASHAS0.5°0.0°
CASCANNAOCAL179.7°180.0°
CASCANNAOHAO0.3°0.0°
HASCASCANNAO0.1°0.0°
CANNAOCALHAO180.0°180.0°
CANNAOCALHAL179.6°180.0°
HAONAOCALHAL0.4°0.0°

246704

PDB entries from 2025-12-24

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