BGS

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C2'	S1	sing	1.81Å	1.85Å
C2'	CS	sing	1.53Å	1.51Å
C2'	H2'1	sing	1.09Å	1.10Å
C2'	H2'2	sing	1.09Å	1.10Å
O2'	S1	doub	1.42Å	1.49Å
C5	C6	sing	1.53Å	1.52Å
C5	C4	sing	1.53Å	1.55Å
C5	O5	sing	1.43Å	1.47Å
C5	H5	sing	1.09Å	1.10Å
C6	O6	sing	1.43Å	1.42Å
C6	H61	sing	1.09Å	1.10Å
C6	H62	sing	1.09Å	1.10Å
C2	C1	sing	1.53Å	1.55Å
C2	O2	sing	1.43Å	1.40Å
C2	C3	sing	1.53Å	1.53Å
C2	H2	sing	1.09Å	1.10Å
C4	C3	sing	1.53Å	1.54Å
C4	O4	sing	1.43Å	1.45Å
C4	H4	sing	1.09Å	1.10Å
C1	S1	sing	1.81Å	1.82Å
C1	O5	sing	1.43Å	1.46Å
C1	H1	sing	1.09Å	1.10Å
S1	O1'	doub	1.42Å	1.47Å
O2	HO2	sing	0.97Å	0.95Å
C3	O3	sing	1.43Å	1.40Å
C3	H3	sing	1.09Å	1.10Å
O3	HO3	sing	0.97Å	0.95Å
O4	HO4	sing	0.97Å	0.95Å
O6	HO6	sing	0.97Å	0.95Å
CS	HS1	sing	1.09Å	1.10Å
CS	HS2	sing	1.09Å	1.10Å
CS	HS3	sing	1.09Å	1.10Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
S1	C2'	CS	108.8°	109.4°
S1	C2'	H2'1	109.9°	109.5°
S1	C2'	H2'2	109.7°	109.5°
C2'	S1	O2'	109.4°	109.0°
C2'	S1	C1	103.0°	99.4°
C2'	S1	O1'	111.6°	109.0°
CS	C2'	H2'1	109.9°	109.4°
CS	C2'	H2'2	109.7°	109.4°
C2'	CS	HS1	109.5°	109.5°
C2'	CS	HS2	109.5°	109.5°
C2'	CS	HS3	109.5°	109.5°
H2'1	C2'	H2'2	108.9°	109.5°
O2'	S1	C1	110.7°	109.0°
O2'	S1	O1'	108.3°	119.6°
C6	C5	C4	111.9°	109.3°
C6	C5	O5	107.8°	109.4°
C6	C5	H5	109.2°	109.4°
C5	C6	O6	115.9°	109.4°
C5	C6	H61	105.9°	109.4°
C5	C6	H62	107.4°	109.5°
C4	C5	O5	110.0°	109.8°
C4	C5	H5	106.9°	109.4°
C5	C4	C3	109.2°	109.0°
C5	C4	O4	110.5°	109.6°
C5	C4	H4	109.2°	109.6°
O5	C5	H5	111.1°	109.5°
C5	O5	C1	112.5°	107.6°
O6	C6	H61	105.9°	109.5°
O6	C6	H62	107.4°	109.5°
C6	O6	HO6	109.5°	106.7°
H61	C6	H62	114.6°	109.4°
C1	C2	O2	110.2°	109.6°
C1	C2	C3	109.0°	109.0°
C1	C2	H2	109.4°	109.7°
C2	C1	S1	110.3°	109.4°
C2	C1	O5	110.3°	109.7°
C2	C1	H1	107.8°	109.4°
O2	C2	C3	109.9°	109.5°
O2	C2	H2	108.5°	109.5°
C2	O2	HO2	109.5°	106.8°
C3	C2	H2	109.7°	109.5°
C2	C3	C4	108.7°	108.6°
C2	C3	O3	110.1°	109.7°
C2	C3	H3	109.8°	109.7°
C3	C4	O4	109.9°	109.6°
C3	C4	H4	109.7°	109.5°
C4	C3	O3	110.2°	109.6°
C4	C3	H3	109.8°	109.6°
O4	C4	H4	108.4°	109.6°
C4	O4	HO4	109.5°	106.8°
S1	C1	O5	107.7°	109.4°
S1	C1	H1	110.4°	109.4°
C1	S1	O1'	113.8°	109.0°
O5	C1	H1	110.3°	109.4°
O3	C3	H3	108.3°	109.6°
C3	O3	HO3	109.5°	106.8°
HS1	CS	HS2	109.5°	109.4°
HS1	CS	HS3	109.4°	109.5°
HS2	CS	HS3	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
S1	C2'	CS	H2'1	120.3°	120.0°
S1	C2'	CS	H2'2	120.0°	120.1°
S1	C2'	H2'1	H2'2	120.2°	120.1°
C2'	S1	O2'	C1	112.8°	107.5°
C2'	S1	O2'	O1'	121.8°	126.2°
C2'	S1	C1	C2	166.6°	179.9°
C2'	S1	C1	O1'	120.9°	114.0°
C2'	S1	C1	O5	46.1°	59.9°
C2'	S1	C1	H1	74.4°	60.0°
S1	C2'	CS	HS1	68.7°	180.0°
S1	C2'	CS	HS2	171.3°	60.0°
S1	C2'	CS	HS3	51.3°	60.1°
CS	C2'	H2'1	H2'2	120.2°	119.9°
CS	C2'	S1	O2'	20.2°	66.1°
CS	C2'	S1	C1	137.9°	180.0°
CS	C2'	S1	O1'	99.6°	66.0°
C2'	CS	HS1	HS2	120.0°	120.0°
C2'	CS	HS1	HS3	120.0°	120.0°
C2'	CS	HS2	HS3	120.0°	120.0°
H2'1	C2'	S1	O2'	100.1°	174.0°
H2'1	C2'	S1	C1	17.6°	60.1°
H2'1	C2'	S1	O1'	140.1°	53.9°
H2'1	C2'	CS	HS1	171.0°	60.0°
H2'1	C2'	CS	HS2	51.0°	60.0°
H2'1	C2'	CS	HS3	69.0°	180.0°
H2'2	C2'	S1	O2'	140.1°	53.9°
H2'2	C2'	S1	C1	102.1°	60.0°
H2'2	C2'	S1	O1'	20.4°	174.0°
H2'2	C2'	CS	HS1	51.3°	60.0°
H2'2	C2'	CS	HS2	68.7°	180.0°
H2'2	C2'	CS	HS3	171.3°	60.0°
O2'	S1	C1	C2	76.6°	65.9°
O2'	S1	C1	O1'	122.2°	132.1°
O2'	S1	C1	O5	162.9°	173.8°
O2'	S1	C1	H1	42.4°	54.0°
C6	C5	C4	O5	119.7°	120.0°
C6	C5	C4	H5	119.5°	119.8°
C6	C5	O5	H5	119.6°	119.9°
C5	C6	O6	H61	117.1°	119.9°
C5	C6	O6	H62	120.0°	120.0°
C5	C6	H61	H62	118.2°	120.0°
C6	C5	C4	C3	178.0°	178.7°
C6	C5	C4	O4	61.0°	58.8°
C6	C5	C4	H4	58.1°	61.5°
C6	C5	O5	C1	178.5°	172.4°
C5	C6	O6	HO6	102.2°	179.9°
C4	C5	O5	H5	118.2°	120.1°
C4	C5	C6	O6	59.6°	174.7°
C4	C5	C6	H61	57.4°	54.7°
C4	C5	C6	H62	179.6°	65.3°
C5	C4	C3	C2	58.7°	53.8°
C5	C4	C3	O4	121.4°	119.9°
C5	C4	C3	H4	119.6°	119.9°
C5	C4	O4	H4	119.6°	120.3°
C4	C5	O5	C1	59.2°	67.7°
C5	C4	C3	O3	179.4°	173.6°
C5	C4	C3	H3	61.5°	66.0°
C5	C4	O4	HO4	167.6°	60.0°
O5	C5	C6	O6	61.4°	65.1°
O5	C5	C6	H61	178.5°	175.0°
O5	C5	C6	H62	58.6°	55.0°
C5	O5	C1	C2	59.5°	67.7°
O5	C5	C4	C3	58.2°	61.3°
O5	C5	C4	O4	179.2°	178.8°
O5	C5	C4	H4	61.7°	58.5°
C5	O5	C1	S1	179.9°	172.3°
C5	O5	C1	H1	59.5°	52.4°
H5	C5	C6	O6	177.8°	54.9°
H5	C5	C6	H61	60.7°	65.1°
H5	C5	C6	H62	62.2°	174.9°
H5	C5	C4	C3	62.5°	58.9°
H5	C5	C4	O4	58.5°	61.1°
H5	C5	C4	H4	177.5°	178.7°
H5	C5	O5	C1	59.0°	52.5°
O6	C6	H61	H62	118.2°	120.1°
H61	C6	O6	HO6	140.8°	60.0°
H62	C6	O6	HO6	17.8°	60.0°
C1	C2	O2	C3	120.2°	119.5°
C1	C2	O2	H2	119.8°	120.3°
C1	C2	C3	H2	119.8°	120.0°
C1	C2	C3	C4	58.6°	53.9°
C2	C1	S1	O5	120.5°	120.2°
C2	C1	S1	H1	119.0°	119.9°
C2	C1	O5	H1	119.0°	120.1°
C2	C1	S1	O1'	45.6°	66.2°
C1	C2	O2	HO2	160.1°	179.5°
C1	C2	C3	O3	179.4°	173.6°
C1	C2	C3	H3	61.4°	65.9°
O2	C2	C3	H2	119.3°	120.1°
O2	C2	C3	C4	179.6°	173.7°
O2	C2	C1	S1	61.7°	58.7°
O2	C2	C1	O5	179.3°	178.7°
O2	C2	C1	H1	58.8°	61.2°
O2	C2	C3	O3	59.7°	66.5°
O2	C2	C3	H3	59.5°	53.9°
C2	C3	C4	O3	120.7°	119.8°
C2	C3	C4	H3	120.1°	119.8°
C2	C3	C4	O4	180.0°	173.7°
C2	C3	C4	H4	60.9°	66.1°
C3	C2	C1	S1	177.5°	178.6°
C3	C2	C1	O5	58.6°	61.4°
C3	C2	C1	H1	61.9°	58.7°
C3	C2	O2	HO2	39.9°	60.0°
C2	C3	O3	H3	120.1°	120.5°
C2	C3	O3	HO3	1.2°	179.2°
H2	C2	C3	C4	61.1°	66.1°
H2	C2	C1	S1	57.5°	61.5°
H2	C2	C1	O5	61.4°	58.5°
H2	C2	C1	H1	178.1°	178.6°
H2	C2	O2	HO2	80.1°	60.2°
H2	C2	C3	O3	59.6°	53.6°
H2	C2	C3	H3	178.8°	174.1°
C3	C4	O4	H4	119.9°	120.2°
C4	C3	O3	H3	120.0°	120.4°
C4	C3	O3	HO3	118.7°	60.1°
C3	C4	O4	HO4	47.1°	179.5°
O4	C4	C3	O3	59.3°	66.5°
O4	C4	C3	H3	59.9°	53.8°
H4	C4	C3	O3	59.8°	53.8°
H4	C4	C3	H3	179.0°	174.1°
H4	C4	O4	HO4	72.8°	60.2°
S1	C1	O5	H1	120.5°	119.9°
O5	C1	S1	O1'	74.9°	54.1°
H1	C1	S1	O1'	164.6°	173.9°
H3	C3	O3	HO3	121.3°	60.3°
HS1	CS	HS2	HS3	120.0°	120.0°

Definition date:	2005-10-26
Last modified:	2024-09-27
Release status:	REL
Processing site:	RCSB
Derived from:	2B5Z