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BGO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C'C1'sing1.47Å1.54Å
C'O1'doub1.21Å1.23Å
C'O3'sing1.35Å1.36Å
N1C2sing1.36Å1.41Å
N1C6sing1.35Å1.39Å
C2N2sing1.37Å1.34Å
C2N3doub1.31Å1.35Å
N3C4sing1.34Å1.35Å
C4C5doub1.40Å1.40ÅAromatic
C4N9sing1.37Å1.32ÅAromatic
C5C6sing1.41Å1.38Å
C5N7sing1.36Å1.34ÅAromatic
C6O6doub1.22Å1.23Å
N7C8doub1.30Å1.34ÅAromatic
C8N9sing1.36Å1.34ÅAromatic
N9C1Bsing1.46Å1.44Å
PAO1Adoub1.48Å1.47Å
PAO2Asing1.61Å1.48Å
PAO3Asing1.61Å1.56Å
PAO5'sing1.61Å1.59Å
PBO1Bsing1.61Å1.47Å
PBO2Bdoub1.48Å1.45Å
PBO3Asing1.61Å1.64Å
PBO3Bsing1.61Å1.49Å
C1'C2'doub1.40Å1.41ÅAromatic
C1'C6'sing1.40Å1.40ÅAromatic
C1BC2Bsing1.55Å1.43Å
C1BO4'sing1.44Å1.49Å
C2'N2'sing1.39Å1.33Å
C2'C3'sing1.39Å1.40ÅAromatic
N2'CM'sing1.46Å1.48Å
O2'C2Bsing1.43Å1.44Å
C2BC3Bsing1.55Å1.45Å
C3'C4'doub1.38Å1.38ÅAromatic
O3'C3Bsing1.45Å1.44Å
C3BC4Bsing1.54Å1.53Å
C4'C5'sing1.39Å1.39ÅAromatic
O4'C4Bsing1.44Å1.50Å
C4BC5Bsing1.53Å1.55Å
C5'C6'doub1.38Å1.40ÅAromatic
O5'C5Bsing1.43Å1.41Å
N1HN1sing0.97Å1.00Å
N2HN2sing0.97Å1.00Å
N2HN2Asing0.97Å1.00Å
C8H8sing1.08Å1.08Å
C1BH1Bsing1.09Å1.10Å
O1BHO1Bsing0.97Å0.95Å
N2'HN2'sing0.97Å1.00Å
O2'HO2'sing0.97Å0.95Å
O2AHO2Asing0.97Å0.95Å
C2BH2Bsing1.09Å1.10Å
C3'H3'sing1.08Å1.08Å
C3BH3Bsing1.09Å1.10Å
O3BHO3Bsing0.97Å0.95Å
C4'H4'sing1.08Å1.08Å
C4BH4Bsing1.09Å1.10Å
C5'H5'sing1.08Å1.08Å
C5BH5Bsing1.09Å1.10Å
C5BH5BAsing1.09Å1.10Å
C6'H6'sing1.08Å1.08Å
CM'HM'sing1.09Å1.10Å
CM'HM'Asing1.09Å1.10Å
CM'HM'Bsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1'C'O1'122.7°120.0°
C1'C'O3'117.8°120.0°
C'C1'C2'122.6°120.2°
C'C1'C6'117.8°120.2°
O1'C'O3'119.5°120.0°
C'O3'C3B117.0°117.0°
C2N1C6121.4°120.3°
N1C2N2118.3°119.0°
N1C2N3119.3°121.9°
C2N1HN1119.3°119.9°
N1C6C5118.5°118.3°
N1C6O6119.7°120.9°
C6N1HN1119.3°119.8°
N2C2N3122.4°119.0°
C2N2HN2120.0°120.0°
C2N2HN2A120.0°120.0°
C2N3C4119.4°121.1°
N3C4C5123.4°119.6°
N3C4N9131.3°134.2°
C5C4N9105.3°106.1°
C4C5C6117.9°118.6°
C4C5N7108.5°107.3°
C4N9C8110.5°107.5°
C4N9C1B117.9°126.2°
C6C5N7133.5°134.1°
C5C6O6121.7°120.8°
C5N7C8107.6°109.3°
N7C8N9108.0°109.9°
N7C8H8126.0°125.1°
C8N9C1B131.5°126.3°
N9C8H8126.0°125.1°
N9C1BC2B125.0°110.7°
N9C1BO4'102.6°110.6°
N9C1BH1B100.5°110.5°
O1APAO2A118.9°109.5°
O1APAO3A111.7°109.5°
O1APAO5'101.7°109.4°
O2APAO3A108.6°109.5°
O2APAO5'111.2°109.5°
PAO2AHO2A109.5°114.0°
O3APAO5'103.6°109.5°
PAO3APB124.5°134.0°
PAO5'C5B122.5°123.0°
O1BPBO2B115.3°109.5°
O1BPBO3A101.7°109.4°
O1BPBO3B115.1°109.5°
PBO1BHO1B109.5°114.0°
O2BPBO3A112.4°109.5°
O2BPBO3B113.6°109.5°
O3APBO3B96.4°109.5°
PBO3BHO3B109.5°113.9°
C2'C1'C6'119.6°119.5°
C1'C2'N2'122.4°120.2°
C1'C2'C3'118.5°119.7°
C1'C6'C5'121.2°119.9°
C1'C6'H6'119.4°120.0°
C2BC1BO4'93.2°103.5°
C1BC2BO2'110.7°110.9°
C1BC2BC3B127.9°102.1°
C2BC1BH1B108.9°110.6°
C1BC2BH2B93.0°110.9°
C1BO4'C4B112.0°106.9°
O4'C1BH1B129.4°110.7°
N2'C2'C3'119.1°120.2°
C2'N2'CM'122.2°120.0°
C2'N2'HN2'105.4°120.0°
C2'C3'C4'121.4°120.0°
C2'C3'H3'119.3°120.0°
CM'N2'HN2'105.4°120.0°
N2'CM'HM'109.5°109.4°
N2'CM'HM'A109.5°109.4°
N2'CM'HM'B109.4°109.5°
O2'C2BC3B111.0°110.9°
C2BO2'HO2'109.5°114.0°
O2'C2BH2B119.3°110.8°
C2BC3BO3'100.2°110.5°
C2BC3BC4B91.7°104.2°
C3BC2BH2B92.7°110.9°
C2BC3BH3B121.3°110.5°
C3'C4'C5'120.5°120.5°
C4'C3'H3'119.3°120.0°
C3'C4'H4'119.7°119.7°
O3'C3BC4B97.3°110.5°
O3'C3BH3B117.1°110.4°
C3BC4BO4'110.0°107.3°
C3BC4BC5B116.4°109.9°
C4BC3BH3B123.5°110.6°
C3BC4BH4B102.7°109.9°
C4'C5'C6'118.8°120.3°
C5'C4'H4'119.7°119.8°
C4'C5'H5'120.6°119.9°
O4'C4BC5B104.2°109.9°
O4'C4BH4B115.2°109.9°
C4BC5BO5'110.3°109.5°
C5BC4BH4B108.7°110.0°
C4BC5BH5B109.2°109.5°
C4BC5BH5BA109.2°109.4°
C6'C5'H5'120.6°119.8°
C5'C6'H6'119.4°120.0°
O5'C5BH5B109.2°109.5°
O5'C5BH5BA109.2°109.5°
HN2N2HN2A120.0°120.0°
H5BC5BH5BA109.7°109.5°
HM'CM'HM'A109.5°109.5°
HM'CM'HM'B109.5°109.5°
HM'ACM'HM'B109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1'C'O1'O3'178.4°179.7°
C'C1'C2'C6'179.3°179.8°
C'C1'C2'N2'0.7°0.0°
C'C1'C2'C3'179.4°180.0°
C1'C'O3'C3B177.7°180.0°
C'C1'C6'C5'179.7°179.7°
C'C1'C6'H6'0.3°0.0°
O1'C'C1'C2'13.6°5.5°
O1'C'C1'C6'167.1°174.2°
O1'C'O3'C3B3.8°0.3°
O3'C'C1'C2'164.8°174.1°
O3'C'C1'C6'14.5°6.1°
C'O3'C3BC2B104.9°91.5°
C'O3'C3BC4B162.1°153.8°
C'O3'C3BH3B28.4°31.1°
C2N1C6HN1180.0°179.7°
N1C2N2N3179.5°179.9°
N1C2N3C40.2°0.1°
C2N1C6C50.1°0.0°
C2N1C6O6179.2°180.0°
N1C2N2HN2179.5°0.0°
N1C2N2HN2A0.5°180.0°
C6N1C2N2179.6°180.0°
C6N1C2N30.1°0.1°
N1C6C5C40.1°0.0°
N1C6C5O6179.3°180.0°
N1C6C5N7179.4°180.0°
N2C2N3C4179.3°180.0°
N2C2N1HN10.5°0.3°
C2N2HN2HN2A180.0°180.0°
C2N3C4C50.5°0.0°
C2N3C4N9179.7°180.0°
N3C2N1HN1180.0°179.8°
N3C2N2HN20.0°180.0°
N3C2N2HN2A180.0°0.0°
N3C4C5N9179.9°180.0°
N3C4C5C60.4°0.0°
N3C4C5N7179.3°180.0°
N3C4N9C8179.0°180.0°
N3C4N9C1B1.5°0.1°
C4C5C6N7179.6°179.9°
C4C5C6O6179.4°180.0°
C4C5N7C80.2°0.0°
C5C4N9C80.8°0.0°
C5C4N9C1B178.3°179.9°
N9C4C5C6179.7°180.0°
N9C4C5N70.6°0.0°
C4N9C8N70.8°0.0°
C4N9C8C1B177.0°180.0°
C4N9C1BC2B142.9°85.0°
C4N9C1BO4'114.0°160.9°
C4N9C8H8179.2°180.0°
C4N9C1BH1B20.7°38.0°
C6C5N7C8179.8°180.0°
C5C6N1HN1179.9°179.7°
N7C5C6O60.2°0.1°
C5N7C8N90.4°0.0°
C5N7C8H8179.6°180.0°
O6C6N1HN10.8°0.3°
N7C8N9H8180.0°180.0°
N7C8N9C1B177.8°179.9°
C8N9C1BC2B40.3°95.0°
C8N9C1BO4'62.8°19.2°
C8N9C1BH1B162.4°142.1°
N9C1BC2BO4'107.8°118.5°
N9C1BC2BH1B118.4°122.9°
N9C1BO4'H1B115.2°122.9°
N9C1BC2BO2'87.6°86.3°
N9C1BC2BC3B131.1°155.5°
N9C1BO4'C4B134.5°158.6°
C1BN9C8H82.2°0.0°
N9C1BC2BH2B35.3°37.3°
O1APAO2AO3A129.1°120.0°
O1APAO2AO5'117.6°120.0°
O1APAO3AO5'108.7°120.0°
O1APAO3APB72.1°40.0°
O1APAO5'C5B167.9°55.0°
O1APAO2AHO2A0.0°180.0°
O2APAO3AO5'118.2°120.0°
O2APAO3APB60.9°80.0°
O2APAO5'C5B64.5°65.0°
PAO3APBO1B148.3°75.0°
PAO3APBO2B24.4°45.0°
PAO3APBO3B94.4°165.0°
O3APAO5'C5B51.9°175.0°
O3APAO2AHO2A129.1°60.0°
O5'PAO3APB179.2°160.0°
PAO5'C5BC4B147.0°180.0°
O5'PAO2AHO2A117.5°60.0°
PAO5'C5BH5B93.0°60.0°
PAO5'C5BH5BA27.0°60.0°
O1BPBO2BO3A115.9°120.0°
O1BPBO2BO3B135.9°120.0°
O1BPBO3AO3B117.3°120.0°
O1BPBO3BHO3B136.0°60.0°
O2BPBO3AO3B118.9°120.0°
O2BPBO1BHO1B0.0°180.0°
O2BPBO3BHO3B0.0°60.0°
O3APBO1BHO1B121.8°60.1°
O3APBO3BHO3B117.9°180.0°
O3BPBO1BHO1B135.3°59.9°
C1'C2'N2'C3'179.9°179.9°
C1'C2'N2'CM'167.8°174.4°
C1'C2'C3'C4'0.2°0.0°
C2'C1'C6'C5'0.3°0.5°
C1'C2'N2'HN2'72.2°5.6°
C1'C2'C3'H3'179.8°180.0°
C2'C1'C6'H6'179.7°179.8°
C6'C1'C2'N2'180.0°179.7°
C6'C1'C2'C3'0.1°0.2°
C1'C6'C5'C4'0.2°0.6°
C1'C6'C5'H6'180.0°179.7°
C1'C6'C5'H5'179.8°179.7°
C2BC1BO4'H1B117.8°118.6°
C1BC2BO2'C3B148.1°112.8°
C1BC2BO2'H2B106.1°123.6°
C1BC2BC3BH2B95.9°118.2°
C1BC2BC3BO3'71.8°97.8°
C1BC2BC3BC4B25.9°20.8°
C2BC1BO4'C4B7.6°40.0°
C1BC2BO2'HO2'139.8°61.4°
C1BC2BC3BH3B157.5°139.7°
O4'C1BC2BO2'164.5°155.2°
O4'C1BC2BC3B23.2°37.0°
C1BO4'C4BC3B5.3°26.5°
C1BO4'C4BC5B120.1°145.9°
O4'C1BC2BH2B72.5°81.2°
C1BO4'C4BH4B120.8°93.0°
C2'N2'CM'HN2'120.0°180.0°
N2'C2'C3'C4'179.6°179.9°
N2'C2'C3'H3'0.4°0.0°
C2'N2'CM'HM'180.0°59.9°
C2'N2'CM'HM'A60.0°60.0°
C2'N2'CM'HM'B60.0°180.0°
C3'C2'N2'CM'12.1°5.7°
C2'C3'C4'H3'180.0°180.0°
C2'C3'C4'C5'0.4°0.1°
C3'C2'N2'HN2'108.0°174.3°
C2'C3'C4'H4'179.6°180.0°
N2'CM'HM'HM'A120.0°119.9°
N2'CM'HM'HM'B120.0°120.0°
N2'CM'HM'AHM'B120.0°120.0°
O2'C2BC3BH2B122.9°123.6°
O2'C2BC3BO3'69.4°20.4°
O2'C2BC3BC4B167.2°139.1°
O2'C2BC1BH1B30.8°36.6°
O2'C2BC3BH3B61.2°102.1°
C2BC3BO3'C4B93.0°114.7°
C2BC3BO3'H3B133.3°122.6°
C2BC3BC4BH3B130.0°118.8°
C2BC3BC4BO4'14.9°2.1°
C2BC3BC4BC5B103.3°121.5°
C3BC2BC1BH1B110.5°81.6°
C3BC2BO2'HO2'8.3°174.1°
C2BC3BC4BH4B138.1°117.4°
C3'C4'C5'H4'180.0°179.9°
C3'C4'C5'C6'0.2°0.4°
C3'C4'C5'H5'179.8°179.9°
O3'C3BC4BH3B129.5°122.6°
O3'C3BC4BO4'85.6°120.7°
O3'C3BC4BC5B156.2°119.9°
O3'C3BC2BH2B167.7°144.0°
O3'C3BC4BH4B37.6°1.2°
C3BC4BO4'C5B125.5°119.4°
C3BC4BO4'H4B115.5°119.5°
C3BC4BC5BH4B115.3°121.1°
C3BC4BC5BO5'40.8°175.0°
C4BC3BC2BH2B70.0°97.3°
C3BC4BC5BH5B160.8°55.0°
C3BC4BC5BH5BA79.2°65.0°
C4'C5'C6'H5'180.0°179.7°
C5'C4'C3'H3'179.6°180.0°
C4'C5'C6'H6'179.8°179.7°
O4'C4BC5BH4B123.4°121.1°
O4'C4BC5BO5'80.4°67.1°
C4BO4'C1BH1B110.2°78.6°
O4'C4BC3BH3B144.9°116.7°
O4'C4BC5BH5B39.6°172.8°
O4'C4BC5BH5BA159.6°52.9°
C4BC5BO5'H5B120.0°120.0°
C4BC5BO5'H5BA120.0°120.0°
C5BC4BC3BH3B26.7°2.7°
C4BC5BH5BH5BA119.7°119.9°
C6'C5'C4'H4'179.8°179.7°
O5'C5BC4BH4B156.2°53.9°
O5'C5BH5BH5BA119.6°120.0°
H1BC1BC2BH2B153.7°160.2°
HN2'N2'CM'HM'60.0°120.0°
HN2'N2'CM'HM'A180.0°120.1°
HN2'N2'CM'HM'B60.0°0.1°
HO2'O2'C2BH2B114.1°62.2°
H2BC2BC3BH3B61.6°21.5°
H3'C3'C4'H4'0.4°0.0°
H3BC3BC4BH4B91.9°123.8°
H4'C4'C5'H5'0.2°0.0°
H4BC4BC5BH5B83.8°66.1°
H4BC4BC5BH5BA36.2°173.9°
H5'C5'C6'H6'0.1°0.0°
HM'CM'HM'AHM'B120.0°120.1°

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PDB entries from 2024-07-17

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