BDG

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C5	O5	sing	1.43Å	1.44Å
C5	C4	sing	1.53Å	1.52Å
C5	C6	sing	1.53Å	1.53Å
C5	H5	sing	1.09Å	1.10Å
O5	C1	sing	1.43Å	1.45Å
C1	O1	sing	1.43Å	1.45Å
C1	C2	sing	1.53Å	1.53Å
C1	H1	sing	1.09Å	1.09Å
O1	HO1	sing	0.97Å	0.95Å
C2	N2	sing	1.47Å	1.45Å
C2	C3	sing	1.53Å	1.52Å
C2	H2	sing	1.09Å	1.10Å
N2	HN21	sing	1.01Å	0.98Å
N2	HN22	sing	1.01Å	0.98Å
C3	O3	sing	1.43Å	1.42Å
C3	C4	sing	1.53Å	1.52Å
C3	H3	sing	1.09Å	1.09Å
O3	HO3	sing	0.97Å	0.97Å
C4	O4	sing	1.43Å	1.42Å
C4	H4	sing	1.09Å	1.09Å
O4	HO4	sing	0.97Å	0.96Å
C6	N6	sing	1.47Å	1.45Å
C6	H61	sing	1.09Å	1.11Å
C6	H62	sing	1.09Å	1.09Å
N6	HN61	sing	1.01Å	0.98Å
N6	HN62	sing	1.01Å	0.98Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O5	C5	C4	110.1°	109.8°
O5	C5	C6	110.0°	109.5°
O5	C5	H5	106.7°	109.4°
C5	O5	C1	113.3°	107.6°
C4	C5	C6	107.7°	109.4°
C4	C5	H5	110.1°	109.4°
C5	C4	C3	109.6°	109.0°
C5	C4	O4	110.0°	109.5°
C5	C4	H4	107.6°	109.6°
C6	C5	H5	112.3°	109.3°
C5	C6	N6	110.7°	109.5°
C5	C6	H61	105.0°	109.4°
C5	C6	H62	107.6°	109.5°
O5	C1	O1	112.0°	109.4°
O5	C1	C2	110.6°	109.8°
O5	C1	H1	106.8°	109.4°
O1	C1	C2	111.1°	109.4°
O1	C1	H1	107.5°	109.5°
C1	O1	HO1	112.1°	106.8°
C2	C1	H1	108.5°	109.4°
C1	C2	N2	110.0°	109.5°
C1	C2	C3	111.8°	109.0°
C1	C2	H2	108.3°	109.5°
N2	C2	C3	109.2°	109.7°
N2	C2	H2	110.3°	109.5°
C2	N2	HN21	120.0°	106.7°
C2	N2	HN22	117.7°	106.7°
C3	C2	H2	107.4°	109.5°
C2	C3	O3	109.7°	109.6°
C2	C3	C4	113.2°	108.7°
C2	C3	H3	106.2°	109.6°
HN21	N2	HN22	107.3°	106.7°
O3	C3	C4	109.4°	109.8°
O3	C3	H3	111.9°	109.5°
C3	O3	HO3	111.4°	106.8°
C4	C3	H3	106.4°	109.7°
C3	C4	O4	110.3°	109.6°
C3	C4	H4	110.4°	109.5°
O4	C4	H4	108.8°	109.5°
C4	O4	HO4	110.0°	106.8°
N6	C6	H61	114.0°	109.5°
N6	C6	H62	113.2°	109.5°
C6	N6	HN61	120.2°	106.7°
C6	N6	HN62	120.1°	106.7°
H61	C6	H62	105.7°	109.4°
HN61	N6	HN62	107.5°	106.8°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O5	C5	C4	C6	119.9°	120.1°
O5	C5	C4	H5	117.4°	120.1°
O5	C5	C6	H5	118.7°	119.9°
C5	O5	C1	O1	65.7°	52.4°
C5	O5	C1	C2	58.9°	67.6°
C5	O5	C1	H1	176.9°	172.4°
O5	C5	C4	C3	56.9°	61.3°
O5	C5	C4	O4	178.5°	178.8°
O5	C5	C4	H4	63.1°	58.6°
O5	C5	C6	N6	32.1°	59.8°
O5	C5	C6	H61	91.4°	60.2°
O5	C5	C6	H62	156.3°	179.9°
C4	C5	C6	H5	121.3°	119.8°
C4	C5	O5	C1	63.2°	67.6°
C5	C4	C3	C2	50.5°	53.8°
C5	C4	C3	O3	173.1°	173.7°
C5	C4	C3	O4	121.3°	119.9°
C5	C4	C3	H4	118.4°	119.9°
C5	C4	C3	H3	65.8°	66.0°
C5	C4	O4	H4	117.7°	120.2°
C5	C4	O4	HO4	176.8°	179.6°
C4	C5	C6	N6	152.1°	179.9°
C4	C5	C6	H61	28.6°	60.1°
C4	C5	C6	H62	83.7°	59.8°
C6	C5	O5	C1	178.3°	172.3°
C6	C5	C4	C3	176.9°	178.6°
C6	C5	C4	O4	61.6°	58.6°
C6	C5	C4	H4	56.8°	61.5°
C5	C6	N6	H61	118.1°	119.9°
C5	C6	N6	H62	120.9°	120.1°
C5	C6	H61	H62	113.6°	120.0°
C5	C6	N6	HN61	67.0°	180.0°
C5	C6	N6	HN62	155.3°	66.1°
H5	C5	O5	C1	56.2°	52.4°
H5	C5	C4	C3	60.5°	58.8°
H5	C5	C4	O4	61.1°	61.2°
H5	C5	C4	H4	179.5°	178.7°
H5	C5	C6	N6	86.6°	60.1°
H5	C5	C6	H61	149.9°	180.0°
H5	C5	C6	H62	37.6°	60.1°
O5	C1	O1	C2	124.3°	120.3°
O5	C1	O1	H1	117.0°	119.9°
O5	C1	C2	H1	116.9°	120.1°
O5	C1	O1	HO1	180.0°	60.1°
O5	C1	C2	N2	171.0°	178.8°
O5	C1	C2	C3	49.6°	61.2°
O5	C1	C2	H2	68.4°	58.6°
O1	C1	C2	H1	118.0°	119.9°
O1	C1	C2	N2	45.9°	61.2°
O1	C1	C2	C3	75.5°	58.8°
O1	C1	C2	H2	166.5°	178.6°
C2	C1	O1	HO1	55.6°	179.6°
C1	C2	N2	C3	123.0°	119.6°
C1	C2	N2	H2	119.3°	120.2°
C1	C2	C3	H2	118.6°	119.8°
C1	C2	N2	HN21	34.1°	60.0°
C1	C2	N2	HN22	167.9°	173.8°
C1	C2	C3	O3	169.8°	173.7°
C1	C2	C3	C4	47.3°	53.7°
C1	C2	C3	H3	69.1°	66.1°
H1	C1	O1	HO1	63.0°	59.8°
H1	C1	C2	N2	72.1°	58.7°
H1	C1	C2	C3	166.5°	178.7°
H1	C1	C2	H2	48.5°	61.5°
N2	C2	C3	H2	119.6°	120.2°
C2	N2	HN21	HN22	138.0°	113.8°
N2	C2	C3	O3	68.4°	66.4°
N2	C2	C3	C4	169.2°	173.7°
N2	C2	C3	H3	52.8°	53.9°
C3	C2	N2	HN21	88.9°	179.6°
C3	C2	N2	HN22	45.0°	66.6°
C2	C3	O3	C4	124.7°	119.3°
C2	C3	O3	H3	117.6°	120.2°
C2	C3	C4	H3	116.3°	119.7°
C2	C3	O3	HO3	64.7°	59.9°
C2	C3	C4	O4	171.8°	173.7°
C2	C3	C4	H4	67.9°	66.2°
H2	C2	N2	HN21	153.4°	60.2°
H2	C2	N2	HN22	72.8°	53.6°
H2	C2	C3	O3	51.2°	53.9°
H2	C2	C3	C4	71.3°	66.1°
H2	C2	C3	H3	172.3°	174.1°
O3	C3	C4	H3	121.1°	120.4°
O3	C3	C4	O4	65.5°	66.5°
O3	C3	C4	H4	54.8°	53.7°
C4	C3	O3	HO3	60.0°	179.2°
C3	C4	O4	H4	121.2°	120.2°
C3	C4	O4	HO4	55.7°	60.0°
H3	C3	O3	HO3	177.7°	60.4°
H3	C3	C4	O4	55.6°	53.9°
H3	C3	C4	H4	175.9°	174.1°
H4	C4	O4	HO4	65.5°	60.2°
N6	C6	H61	H62	125.1°	120.1°
C6	N6	HN61	HN62	142.3°	113.8°
H61	C6	N6	HN61	51.1°	60.1°
H61	C6	N6	HN62	86.6°	53.8°
H62	C6	N6	HN61	172.1°	59.9°
H62	C6	N6	HN62	34.4°	173.8°

Definition date:	1999-07-08
Last modified:	2020-07-17
Release status:	REL
Processing site:	RCSB
Derived from:	1QD3