BBV

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O5	C1	sing	1.43Å	1.42Å
C2	C1	sing	1.53Å	1.53Å
C1	O1	sing	1.43Å	1.40Å
C1	H1	sing	1.09Å	1.10Å
O1	C7'	sing	1.43Å	1.34Å
C3	C2	sing	1.53Å	1.53Å
C2	N2	sing	1.46Å	1.46Å
C2	H2	sing	1.09Å	1.10Å
C7	N2	sing	1.35Å	1.35Å
N2	HN2	sing	0.97Å	1.00Å
C4	C3	sing	1.53Å	1.53Å
O3	C3	sing	1.43Å	1.41Å
C3	H3	sing	1.09Å	1.10Å
O3	HO3	sing	0.97Å	0.95Å
O4	C4	sing	1.43Å	1.41Å
C4	C5	sing	1.53Å	1.54Å
C4	H4	sing	1.09Å	1.10Å
O4	HO4	sing	0.97Å	0.95Å
C6	C5	sing	1.53Å	1.54Å
C5	O5	sing	1.43Å	1.43Å
C5	H5	sing	1.09Å	1.10Å
C6	O6	sing	1.43Å	1.42Å
C6	H61	sing	1.09Å	1.10Å
C6	H62	sing	1.09Å	1.10Å
O6	HO6	sing	0.97Å	0.95Å
O7	C7	doub	1.21Å	1.22Å
C7	C8	sing	1.51Å	1.51Å
C8	H81	sing	1.09Å	1.10Å
C8	H82	sing	1.09Å	1.10Å
C8	H83	sing	1.09Å	1.10Å
C7'	C1'	sing	1.51Å	1.49Å
C1'	C2'	doub	1.38Å	1.41Å	Aromatic
C1'	C3'	sing	1.38Å	1.39Å	Aromatic
C2'	C4'	sing	1.38Å	1.39Å	Aromatic
C2'	H2'	sing	1.08Å	1.08Å
C3'	C5'	doub	1.38Å	1.40Å	Aromatic
C3'	H3'	sing	1.08Å	1.08Å
C4'	C6'	doub	1.38Å	1.40Å	Aromatic
C4'	H4'	sing	1.08Å	1.08Å
C5'	C6'	sing	1.38Å	1.42Å	Aromatic
C5'	H5'	sing	1.08Å	1.08Å
C6'	H6'	sing	1.08Å	1.08Å
C7'	H7'	sing	1.09Å	1.10Å
C7'	H7'A	sing	1.09Å	1.10Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O5	C1	C2	110.1°	109.4°
O5	C1	O1	110.5°	109.5°
O5	C1	H1	108.8°	109.5°
C1	O5	C5	115.5°	114.1°
C2	C1	O1	110.9°	109.5°
C2	C1	H1	107.4°	109.4°
C1	C2	C3	110.4°	109.1°
C1	C2	N2	112.8°	109.6°
C1	C2	H2	106.4°	109.5°
O1	C1	H1	109.1°	109.5°
C1	O1	C7'	120.5°	114.0°
O1	C7'	C1'	111.7°	109.4°
O1	C7'	H7'	108.9°	109.5°
O1	C7'	H7'A	108.9°	109.5°
C3	C2	N2	113.1°	109.5°
C3	C2	H2	106.4°	109.6°
C2	C3	C4	111.0°	109.1°
C2	C3	O3	104.8°	109.5°
C2	C3	H3	111.0°	109.5°
N2	C2	H2	107.2°	109.5°
C2	N2	C7	124.2°	120.0°
C2	N2	HN2	117.9°	120.0°
C7	N2	HN2	117.9°	120.0°
N2	C7	O7	123.6°	120.0°
N2	C7	C8	117.5°	120.0°
C4	C3	O3	106.0°	109.6°
C4	C3	H3	110.9°	109.6°
C3	C4	O4	111.2°	109.5°
C3	C4	C5	112.3°	109.2°
C3	C4	H4	106.9°	109.5°
O3	C3	H3	112.8°	109.5°
C3	O3	HO3	109.5°	114.0°
O4	C4	C5	111.1°	109.5°
O4	C4	H4	108.4°	109.6°
C4	O4	HO4	109.5°	114.0°
C5	C4	H4	106.8°	109.5°
C4	C5	C6	112.7°	109.5°
C4	C5	O5	111.5°	109.4°
C4	C5	H5	106.5°	109.5°
C6	C5	O5	111.5°	109.5°
C6	C5	H5	106.5°	109.5°
C5	C6	O6	108.5°	109.4°
C5	C6	H61	109.7°	109.5°
C5	C6	H62	109.7°	109.5°
O5	C5	H5	107.7°	109.5°
O6	C6	H61	109.7°	109.5°
O6	C6	H62	109.7°	109.5°
C6	O6	HO6	109.5°	114.0°
H61	C6	H62	109.5°	109.5°
O7	C7	C8	118.9°	120.0°
C7	C8	H81	109.5°	109.4°
C7	C8	H82	109.5°	109.5°
C7	C8	H83	109.5°	109.5°
H81	C8	H82	109.5°	109.5°
H81	C8	H83	109.4°	109.4°
H82	C8	H83	109.5°	109.5°
C7'	C1'	C2'	120.0°	120.0°
C7'	C1'	C3'	118.7°	120.0°
C1'	C7'	H7'	108.9°	109.5°
C1'	C7'	H7'A	108.9°	109.5°
C2'	C1'	C3'	121.3°	120.0°
C1'	C2'	C4'	120.0°	120.0°
C1'	C2'	H2'	120.0°	120.0°
C1'	C3'	C5'	118.5°	120.0°
C1'	C3'	H3'	120.8°	120.0°
C4'	C2'	H2'	120.0°	120.0°
C2'	C4'	C6'	119.5°	120.0°
C2'	C4'	H4'	120.3°	120.0°
C5'	C3'	H3'	120.8°	120.0°
C3'	C5'	C6'	120.7°	120.0°
C3'	C5'	H5'	119.6°	119.9°
C6'	C4'	H4'	120.3°	120.0°
C4'	C6'	C5'	120.0°	120.0°
C4'	C6'	H6'	120.0°	120.0°
C6'	C5'	H5'	119.7°	120.0°
C5'	C6'	H6'	120.0°	120.0°
H7'	C7'	H7'A	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O5	C1	C2	O1	122.6°	120.0°
O5	C1	C2	H1	118.3°	120.0°
O5	C1	O1	H1	119.6°	120.1°
O5	C1	O1	C7'	75.3°	70.0°
O5	C1	C2	C3	57.0°	57.6°
O5	C1	C2	N2	175.3°	177.5°
O5	C1	C2	H2	58.1°	62.4°
C1	O5	C5	C4	55.6°	61.1°
C1	O5	C5	C6	177.5°	178.9°
C1	O5	C5	H5	61.0°	58.8°
C2	C1	O1	H1	118.1°	120.0°
C2	C1	O1	C7'	162.3°	170.0°
C1	C2	C3	N2	127.4°	119.9°
C1	C2	C3	H2	115.1°	119.9°
C1	C2	N2	H2	116.8°	120.1°
C1	C2	N2	C7	122.7°	85.0°
C1	C2	N2	HN2	57.3°	94.9°
C1	C2	C3	C4	52.3°	57.0°
C1	C2	C3	O3	166.3°	176.9°
C1	C2	C3	H3	71.6°	62.9°
C2	C1	O5	C5	60.1°	61.1°
O1	C1	C2	C3	65.6°	62.4°
O1	C1	C2	N2	62.1°	57.5°
O1	C1	C2	H2	179.3°	177.6°
O1	C1	O5	C5	62.7°	58.8°
C1	O1	C7'	C1'	172.1°	180.0°
C1	O1	C7'	H7'	67.5°	60.0°
C1	O1	C7'	H7'A	51.8°	60.0°
H1	C1	O1	C7'	44.2°	50.1°
H1	C1	C2	C3	175.4°	177.6°
H1	C1	C2	N2	57.0°	62.5°
H1	C1	C2	H2	60.3°	57.6°
H1	C1	O5	C5	177.6°	178.9°
O1	C7'	C1'	H7'	120.4°	120.0°
O1	C7'	C1'	H7'A	120.3°	120.0°
O1	C7'	C1'	C2'	37.9°	90.0°
O1	C7'	C1'	C3'	142.0°	90.3°
O1	C7'	H7'	H7'A	119.0°	120.0°
C3	C2	N2	H2	117.0°	120.2°
C3	C2	N2	C7	111.1°	155.4°
C3	C2	N2	HN2	68.9°	24.7°
C2	C3	C4	O3	113.3°	119.9°
C2	C3	C4	H3	123.9°	119.9°
C2	C3	O3	H3	120.9°	120.1°
C2	C3	O3	HO3	180.0°	180.0°
C2	C3	C4	O4	173.3°	176.9°
C2	C3	C4	C5	48.2°	57.0°
C2	C3	C4	H4	68.6°	62.9°
C2	N2	C7	HN2	180.0°	179.9°
N2	C2	C3	C4	179.7°	176.9°
N2	C2	C3	O3	66.2°	63.1°
N2	C2	C3	H3	55.9°	57.0°
C2	N2	C7	O7	0.7°	0.0°
C2	N2	C7	C8	179.3°	180.0°
H2	C2	N2	C7	5.8°	35.2°
H2	C2	N2	HN2	174.2°	144.9°
H2	C2	C3	C4	62.8°	63.0°
H2	C2	C3	O3	51.2°	57.0°
H2	C2	C3	H3	173.3°	177.1°
N2	C7	O7	C8	178.6°	180.0°
N2	C7	C8	H81	178.7°	0.0°
N2	C7	C8	H82	61.3°	120.0°
N2	C7	C8	H83	58.7°	119.9°
HN2	N2	C7	O7	179.3°	179.9°
HN2	N2	C7	C8	0.7°	0.1°
C4	C3	O3	H3	121.6°	120.3°
C4	C3	O3	HO3	62.5°	60.4°
C3	C4	O4	C5	125.8°	119.7°
C3	C4	O4	H4	117.2°	120.2°
C3	C4	C5	H4	116.9°	119.9°
C3	C4	O4	HO4	180.0°	180.0°
C3	C4	C5	C6	174.6°	177.6°
C3	C4	C5	O5	48.3°	57.6°
C3	C4	C5	H5	69.0°	62.4°
O3	C3	C4	O4	73.4°	63.2°
O3	C3	C4	C5	161.5°	176.9°
O3	C3	C4	H4	44.7°	57.0°
H3	C3	O3	HO3	59.1°	59.9°
H3	C3	C4	O4	49.4°	57.0°
H3	C3	C4	C5	75.7°	62.9°
H3	C3	C4	H4	167.5°	177.2°
O4	C4	C5	H4	118.0°	120.2°
O4	C4	C5	C6	60.3°	62.5°
O4	C4	C5	O5	173.4°	177.5°
O4	C4	C5	H5	56.1°	57.6°
C5	C4	O4	HO4	54.2°	60.3°
C4	C5	C6	O5	126.3°	120.0°
C4	C5	C6	H5	116.4°	120.0°
C4	C5	O5	H5	116.5°	120.0°
C4	C5	C6	O6	154.4°	175.0°
C4	C5	C6	H61	34.5°	55.0°
C4	C5	C6	H62	85.7°	65.0°
H4	C4	O4	HO4	62.8°	59.9°
H4	C4	C5	C6	57.7°	57.7°
H4	C4	C5	O5	68.6°	62.3°
H4	C4	C5	H5	174.1°	177.7°
C6	C5	O5	H5	116.5°	120.0°
C5	C6	O6	H61	119.9°	120.0°
C5	C6	O6	H62	119.8°	120.0°
C5	C6	H61	H62	120.4°	120.0°
C5	C6	O6	HO6	180.0°	180.0°
O5	C5	C6	O6	79.3°	65.1°
O5	C5	C6	H61	160.8°	174.9°
O5	C5	C6	H62	40.6°	54.9°
H5	C5	C6	O6	38.0°	54.9°
H5	C5	C6	H61	81.9°	65.0°
H5	C5	C6	H62	157.8°	174.9°
O6	C6	H61	H62	120.4°	120.0°
H61	C6	O6	HO6	60.1°	60.0°
H62	C6	O6	HO6	60.1°	60.0°
O7	C7	C8	H81	0.0°	180.0°
O7	C7	C8	H82	120.0°	60.0°
O7	C7	C8	H83	120.0°	60.1°
C7	C8	H81	H82	120.0°	120.0°
C7	C8	H81	H83	120.0°	120.0°
C7	C8	H82	H83	120.0°	120.1°
H81	C8	H82	H83	120.0°	119.9°
C7'	C1'	C2'	C3'	179.9°	179.7°
C7'	C1'	C2'	C4'	178.4°	179.7°
C7'	C1'	C2'	H2'	1.6°	0.3°
C7'	C1'	C3'	C5'	178.5°	179.7°
C7'	C1'	C3'	H3'	1.4°	0.3°
C1'	C7'	H7'	H7'A	119.0°	120.0°
C1'	C2'	C4'	H2'	180.0°	180.0°
C2'	C1'	C3'	C5'	1.4°	0.0°
C2'	C1'	C3'	H3'	178.7°	180.0°
C1'	C2'	C4'	C6'	1.1°	0.0°
C1'	C2'	C4'	H4'	179.0°	180.0°
C2'	C1'	C7'	H7'	82.5°	30.0°
C2'	C1'	C7'	H7'A	158.2°	150.0°
C3'	C1'	C2'	C4'	1.5°	0.0°
C3'	C1'	C2'	H2'	178.5°	180.0°
C1'	C3'	C5'	H3'	180.0°	179.9°
C1'	C3'	C5'	C6'	0.8°	0.1°
C1'	C3'	C5'	H5'	179.2°	179.9°
C3'	C1'	C7'	H7'	97.6°	149.7°
C3'	C1'	C7'	H7'A	21.7°	29.7°
C2'	C4'	C6'	H4'	180.0°	180.0°
C2'	C4'	C6'	C5'	0.5°	0.0°
C2'	C4'	C6'	H6'	179.6°	180.0°
H2'	C2'	C4'	C6'	178.9°	180.0°
H2'	C2'	C4'	H4'	1.0°	0.0°
C3'	C5'	C6'	C4'	0.3°	0.1°
C3'	C5'	C6'	H5'	180.0°	179.9°
C3'	C5'	C6'	H6'	179.7°	180.0°
H3'	C3'	C5'	C6'	179.3°	180.0°
H3'	C3'	C5'	H5'	0.8°	0.1°
C4'	C6'	C5'	H6'	180.0°	179.9°
C4'	C6'	C5'	H5'	179.7°	179.9°
H4'	C4'	C6'	C5'	179.6°	179.9°
H4'	C4'	C6'	H6'	0.4°	0.0°
H5'	C5'	C6'	H6'	0.3°	0.1°

Definition date:	2012-04-09
Last modified:	2020-07-17
Release status:	REL
Processing site:	RCSB
Derived from:	4EEO