B7C
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| OP3 | P | sing | 1.61Å | 1.59Å | |
| P | OP1 | sing | 1.61Å | 1.49Å | |
| P | OP2 | doub | 1.48Å | 1.48Å | |
| P | O5' | sing | 1.61Å | 1.58Å | |
| O5' | C5' | sing | 1.43Å | 1.42Å | |
| N1 | C6 | sing | 1.36Å | 1.37Å | |
| N1 | C2 | sing | 1.34Å | 1.40Å | |
| N1 | C1' | sing | 1.47Å | 1.47Å | |
| C6 | C5 | doub | 1.36Å | 1.34Å | |
| C2 | O2 | doub | 1.22Å | 1.24Å | |
| C2 | N3 | sing | 1.33Å | 1.36Å | |
| N3 | C4 | doub | 1.32Å | 1.33Å | |
| C4 | N4 | sing | 1.38Å | 1.35Å | |
| C4 | C5 | sing | 1.47Å | 1.43Å | |
| N4 | C9 | sing | 1.48Å | 1.47Å | |
| C5 | C7 | sing | 1.48Å | 1.45Å | |
| C7 | C8 | doub | 1.33Å | 1.33Å | |
| C8 | C9 | sing | 1.51Å | 1.51Å | |
| C2' | C1' | sing | 1.54Å | 1.51Å | |
| C2' | C3' | sing | 1.55Å | 1.52Å | |
| C5' | C4' | sing | 1.53Å | 1.51Å | |
| C4' | O4' | sing | 1.44Å | 1.44Å | |
| C4' | C3' | sing | 1.55Å | 1.52Å | |
| O4' | C1' | sing | 1.44Å | 1.42Å | |
| C3' | O3' | sing | 1.43Å | 1.42Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å | |
| OP1 | HOP1 | sing | 0.97Å | 0.95Å | |
| C6 | H6 | sing | 1.08Å | 1.08Å | |
| N4 | HN4 | sing | 0.97Å | 1.00Å | |
| C7 | H7 | sing | 1.08Å | 1.08Å | |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| C9 | H9 | sing | 1.09Å | 1.10Å | |
| C9 | H9A | sing | 1.09Å | 1.10Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| C2' | H2'A | sing | 1.09Å | 1.10Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'A | sing | 1.09Å | 1.10Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP3 | P | OP1 | 107.7° | 109.5° |
| OP3 | P | OP2 | 108.8° | 109.4° |
| OP3 | P | O5' | 101.2° | 109.5° |
| P | OP3 | HOP3 | 109.5° | 114.0° |
| OP1 | P | OP2 | 120.1° | 109.4° |
| OP1 | P | O5' | 108.7° | 109.5° |
| P | OP1 | HOP1 | 109.5° | 114.0° |
| OP2 | P | O5' | 108.7° | 109.5° |
| P | O5' | C5' | 119.7° | 123.0° |
| O5' | C5' | C4' | 109.7° | 109.5° |
| O5' | C5' | H5' | 109.4° | 109.5° |
| O5' | C5' | H5'A | 109.4° | 109.5° |
| C6 | N1 | C2 | 120.4° | 121.4° |
| C6 | N1 | C1' | 121.2° | 119.3° |
| N1 | C6 | C5 | 120.9° | 118.3° |
| N1 | C6 | H6 | 119.6° | 120.8° |
| C2 | N1 | C1' | 118.4° | 119.3° |
| N1 | C2 | O2 | 118.7° | 118.8° |
| N1 | C2 | N3 | 119.3° | 122.4° |
| N1 | C1' | C2' | 116.7° | 110.3° |
| N1 | C1' | O4' | 108.0° | 110.4° |
| N1 | C1' | H1' | 104.2° | 110.4° |
| C6 | C5 | C4 | 117.7° | 118.6° |
| C6 | C5 | C7 | 122.7° | 123.3° |
| C5 | C6 | H6 | 119.6° | 120.9° |
| O2 | C2 | N3 | 122.0° | 118.8° |
| C2 | N3 | C4 | 119.8° | 120.0° |
| N3 | C4 | N4 | 118.5° | 123.9° |
| N3 | C4 | C5 | 121.9° | 119.4° |
| N4 | C4 | C5 | 119.6° | 116.7° |
| C4 | N4 | C9 | 112.5° | 116.0° |
| C4 | N4 | HN4 | 123.8° | 122.0° |
| C4 | C5 | C7 | 119.3° | 118.1° |
| N4 | C9 | C8 | 109.9° | 109.1° |
| C9 | N4 | HN4 | 123.8° | 122.0° |
| N4 | C9 | H9 | 109.3° | 109.5° |
| N4 | C9 | H9A | 109.2° | 109.5° |
| C5 | C7 | C8 | 117.7° | 118.7° |
| C5 | C7 | H7 | 121.1° | 120.6° |
| C7 | C8 | C9 | 117.8° | 120.3° |
| C8 | C7 | H7 | 121.2° | 120.6° |
| C7 | C8 | H8 | 121.1° | 119.9° |
| C9 | C8 | H8 | 121.1° | 119.8° |
| C8 | C9 | H9 | 109.3° | 109.5° |
| C8 | C9 | H9A | 109.2° | 109.5° |
| C1' | C2' | C3' | 100.8° | 104.1° |
| C2' | C1' | O4' | 104.7° | 104.8° |
| C1' | C2' | H2' | 112.5° | 110.5° |
| C1' | C2' | H2'A | 114.3° | 110.5° |
| C2' | C1' | H1' | 107.4° | 110.4° |
| C2' | C3' | C4' | 103.4° | 104.1° |
| C2' | C3' | O3' | 110.0° | 110.5° |
| C3' | C2' | H2' | 112.5° | 110.5° |
| C3' | C2' | H2'A | 114.3° | 110.5° |
| C2' | C3' | H3' | 112.7° | 110.5° |
| C5' | C4' | O4' | 111.1° | 110.4° |
| C5' | C4' | C3' | 113.5° | 110.4° |
| C4' | C5' | H5' | 109.4° | 109.5° |
| C4' | C5' | H5'A | 109.3° | 109.5° |
| C5' | C4' | H4' | 104.5° | 110.3° |
| O4' | C4' | C3' | 106.1° | 104.8° |
| C4' | O4' | C1' | 108.8° | 105.3° |
| O4' | C4' | H4' | 112.2° | 110.4° |
| C4' | C3' | O3' | 108.5° | 110.5° |
| C3' | C4' | H4' | 109.6° | 110.4° |
| C4' | C3' | H3' | 114.1° | 110.5° |
| O4' | C1' | H1' | 116.3° | 110.5° |
| O3' | C3' | H3' | 107.9° | 110.6° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| H9 | C9 | H9A | 109.8° | 109.6° |
| H2' | C2' | H2'A | 103.0° | 110.5° |
| H5' | C5' | H5'A | 109.6° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP3 | P | OP1 | OP2 | 125.2° | 120.0° |
| OP3 | P | OP1 | O5' | 108.8° | 120.1° |
| OP3 | P | OP2 | O5' | 109.3° | 120.0° |
| OP3 | P | O5' | C5' | 33.2° | 65.0° |
| OP3 | P | OP1 | HOP1 | 6.5° | 59.9° |
| OP1 | P | OP2 | O5' | 126.0° | 120.0° |
| OP1 | P | O5' | C5' | 80.0° | 175.0° |
| OP1 | P | OP3 | HOP3 | 141.1° | 60.0° |
| OP2 | P | O5' | C5' | 147.6° | 55.0° |
| OP2 | P | OP3 | HOP3 | 87.2° | 180.0° |
| OP2 | P | OP1 | HOP1 | 118.6° | 60.0° |
| P | O5' | C5' | C4' | 155.8° | 180.0° |
| O5' | P | OP3 | HOP3 | 27.2° | 60.0° |
| O5' | P | OP1 | HOP1 | 115.4° | 180.0° |
| P | O5' | C5' | H5' | 84.2° | 60.0° |
| P | O5' | C5' | H5'A | 35.9° | 60.0° |
| O5' | C5' | C4' | H5' | 120.0° | 120.0° |
| O5' | C5' | C4' | H5'A | 119.9° | 120.1° |
| O5' | C5' | C4' | O4' | 80.7° | 66.4° |
| O5' | C5' | C4' | C3' | 38.7° | 178.1° |
| O5' | C5' | H5' | H5'A | 119.9° | 120.0° |
| O5' | C5' | C4' | H4' | 158.1° | 55.8° |
| C6 | N1 | C2 | C1' | 178.9° | 179.6° |
| N1 | C6 | C5 | H6 | 180.0° | 179.9° |
| C6 | N1 | C2 | O2 | 178.0° | 179.3° |
| C6 | N1 | C2 | N3 | 1.9° | 0.8° |
| N1 | C6 | C5 | C4 | 0.1° | 0.5° |
| N1 | C6 | C5 | C7 | 174.1° | 179.1° |
| C6 | N1 | C1' | C2' | 46.4° | 115.0° |
| C6 | N1 | C1' | O4' | 71.1° | 129.6° |
| C6 | N1 | C1' | H1' | 164.7° | 7.2° |
| C2 | N1 | C6 | C5 | 1.6° | 0.3° |
| N1 | C2 | O2 | N3 | 179.9° | 179.9° |
| N1 | C2 | N3 | C4 | 0.7° | 0.4° |
| C2 | N1 | C1' | C2' | 134.7° | 65.3° |
| C2 | N1 | C1' | O4' | 107.8° | 50.0° |
| C2 | N1 | C6 | H6 | 178.4° | 179.7° |
| C2 | N1 | C1' | H1' | 16.4° | 172.5° |
| C1' | N1 | C6 | C5 | 177.2° | 180.0° |
| C1' | N1 | C2 | O2 | 3.1° | 0.4° |
| C1' | N1 | C2 | N3 | 177.0° | 179.5° |
| N1 | C1' | C2' | O4' | 119.3° | 118.8° |
| N1 | C1' | C2' | H1' | 116.5° | 122.2° |
| N1 | C1' | C2' | C3' | 159.5° | 142.8° |
| N1 | C1' | O4' | C4' | 155.4° | 159.3° |
| N1 | C1' | O4' | H1' | 116.6° | 122.3° |
| C1' | N1 | C6 | H6 | 2.8° | 0.1° |
| N1 | C1' | C2' | H2' | 80.5° | 98.5° |
| N1 | C1' | C2' | H2'A | 36.5° | 24.2° |
| C6 | C5 | C4 | N3 | 1.2° | 0.8° |
| C6 | C5 | C4 | N4 | 177.7° | 178.9° |
| C6 | C5 | C4 | C7 | 174.5° | 179.6° |
| C6 | C5 | C7 | C8 | 170.0° | 161.3° |
| C6 | C5 | C7 | H7 | 10.0° | 18.7° |
| O2 | C2 | N3 | C4 | 179.2° | 179.7° |
| C2 | N3 | C4 | N4 | 178.0° | 179.3° |
| C2 | N3 | C4 | C5 | 0.9° | 0.4° |
| N3 | C4 | N4 | C5 | 178.9° | 179.7° |
| N3 | C4 | N4 | C9 | 148.4° | 144.2° |
| N3 | C4 | C5 | C7 | 175.6° | 178.8° |
| N3 | C4 | N4 | HN4 | 31.6° | 35.7° |
| C4 | N4 | C9 | HN4 | 180.0° | 179.9° |
| N4 | C4 | C5 | C7 | 3.2° | 1.5° |
| C4 | N4 | C9 | C8 | 54.6° | 53.0° |
| C4 | N4 | C9 | H9 | 65.4° | 172.9° |
| C4 | N4 | C9 | H9A | 174.4° | 66.9° |
| C5 | C4 | N4 | C9 | 32.7° | 35.5° |
| C4 | C5 | C7 | C8 | 15.8° | 19.1° |
| C4 | C5 | C6 | H6 | 179.9° | 179.5° |
| C5 | C4 | N4 | HN4 | 147.3° | 144.5° |
| C4 | C5 | C7 | H7 | 164.2° | 160.9° |
| N4 | C9 | C8 | C7 | 43.5° | 35.4° |
| N4 | C9 | C8 | H9 | 120.0° | 119.9° |
| N4 | C9 | C8 | H9A | 119.8° | 119.9° |
| N4 | C9 | C8 | H8 | 136.5° | 144.6° |
| N4 | C9 | H9 | H9A | 119.8° | 120.2° |
| C5 | C7 | C8 | H7 | 180.0° | 180.0° |
| C5 | C7 | C8 | C9 | 9.0° | 1.1° |
| C7 | C5 | C6 | H6 | 5.9° | 1.0° |
| C5 | C7 | C8 | H8 | 171.0° | 178.9° |
| C7 | C8 | C9 | H8 | 180.0° | 179.9° |
| C7 | C8 | C9 | H9 | 76.5° | 155.3° |
| C7 | C8 | C9 | H9A | 163.3° | 84.5° |
| C8 | C9 | N4 | HN4 | 125.3° | 127.0° |
| C9 | C8 | C7 | H7 | 171.0° | 178.9° |
| C8 | C9 | H9 | H9A | 119.8° | 120.2° |
| C1' | C2' | C3' | H2' | 120.0° | 118.7° |
| C1' | C2' | C3' | H2'A | 123.0° | 118.7° |
| C2' | C1' | O4' | C4' | 30.4° | 40.5° |
| C1' | C2' | C3' | C4' | 34.6° | 0.1° |
| C2' | C1' | O4' | H1' | 118.4° | 118.9° |
| C1' | C2' | C3' | O3' | 81.2° | 118.6° |
| C1' | C2' | H2' | H2'A | 123.5° | 122.7° |
| C1' | C2' | C3' | H3' | 158.3° | 118.6° |
| C2' | C3' | C4' | C5' | 104.4° | 142.8° |
| C2' | C3' | C4' | O4' | 17.8° | 23.9° |
| C2' | C3' | C4' | O3' | 116.8° | 118.7° |
| C2' | C3' | C4' | H3' | 122.8° | 118.6° |
| C3' | C2' | C1' | O4' | 40.2° | 24.0° |
| C2' | C3' | O3' | H3' | 123.3° | 122.7° |
| C3' | C2' | H2' | H2'A | 123.5° | 122.6° |
| C2' | C3' | C4' | H4' | 139.2° | 94.9° |
| C3' | C2' | C1' | H1' | 84.0° | 94.9° |
| C2' | C3' | O3' | HO3' | 35.4° | 61.5° |
| C5' | C4' | O4' | C3' | 123.8° | 118.9° |
| C5' | C4' | O4' | H4' | 116.6° | 122.2° |
| C5' | C4' | C3' | H4' | 116.5° | 122.3° |
| C5' | C4' | O4' | C1' | 131.4° | 159.4° |
| C5' | C4' | C3' | O3' | 138.8° | 98.5° |
| C4' | C5' | H5' | H5'A | 119.9° | 119.9° |
| C5' | C4' | C3' | H3' | 18.4° | 24.2° |
| O4' | C4' | C3' | H4' | 121.3° | 118.9° |
| O4' | C4' | C3' | O3' | 99.0° | 142.6° |
| O4' | C4' | C5' | H5' | 159.3° | 53.6° |
| O4' | C4' | C5' | H5'A | 39.2° | 173.5° |
| C4' | O4' | C1' | H1' | 88.0° | 78.3° |
| O4' | C4' | C3' | H3' | 140.6° | 94.6° |
| C3' | C4' | O4' | C1' | 7.7° | 40.5° |
| C4' | C3' | O3' | H3' | 124.2° | 122.7° |
| C4' | C3' | C2' | H2' | 154.5° | 118.7° |
| C4' | C3' | C2' | H2'A | 88.5° | 118.6° |
| C3' | C4' | C5' | H5' | 81.3° | 61.8° |
| C3' | C4' | C5' | H5'A | 158.6° | 58.1° |
| C4' | C3' | O3' | HO3' | 147.9° | 176.2° |
| O4' | C1' | C2' | H2' | 160.2° | 142.6° |
| O4' | C1' | C2' | H2'A | 82.8° | 94.7° |
| C1' | O4' | C4' | H4' | 112.0° | 78.4° |
| O3' | C3' | C2' | H2' | 38.8° | 0.0° |
| O3' | C3' | C2' | H2'A | 155.8° | 122.7° |
| O3' | C3' | C4' | H4' | 22.3° | 23.8° |
| HN4 | N4 | C9 | H9 | 114.7° | 7.2° |
| HN4 | N4 | C9 | H9A | 5.5° | 113.1° |
| H7 | C7 | C8 | H8 | 9.0° | 1.1° |
| H8 | C8 | C9 | H9 | 103.5° | 24.8° |
| H8 | C8 | C9 | H9A | 16.7° | 95.5° |
| H2' | C2' | C1' | H1' | 36.0° | 23.7° |
| H2' | C2' | C3' | H3' | 81.7° | 122.7° |
| H2'A | C2' | C1' | H1' | 153.0° | 146.4° |
| H2'A | C2' | C3' | H3' | 35.3° | 0.1° |
| H5' | C5' | C4' | H4' | 38.1° | 175.8° |
| H5'A | C5' | C4' | H4' | 82.0° | 64.2° |
| H4' | C4' | C3' | H3' | 98.1° | 146.5° |
| H3' | C3' | O3' | HO3' | 87.9° | 61.2° |
