Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryGeometryRelated PDB entries

B5A

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CAENALsing1.47Å1.47Å
CAECAGsing1.53Å1.53Å
NALCADsing1.47Å1.47Å
CADCAFsing1.53Å1.53Å
CAGCAPsing1.53Å1.54Å
CAPCAFsing1.53Å1.54Å
CAPCAHsing1.53Å1.54Å
CAHNAQsing1.47Å1.47Å
NAQNAKsing1.40Å1.24ÅAromatic
NAQC4sing1.36Å1.33ÅAromatic
NAKCACdoub1.30Å1.34ÅAromatic
C4N3doub1.33Å1.34ÅAromatic
C4C5sing1.41Å1.38ÅAromatic
N3C2sing1.32Å1.33ÅAromatic
CACC5sing1.41Å1.33ÅAromatic
C5C6doub1.41Å1.39ÅAromatic
C2N1doub1.32Å1.33ÅAromatic
C6N1sing1.33Å1.35ÅAromatic
C6NAAsing1.38Å1.33Å
CAFH1sing1.09Å1.10Å
CAFH2sing1.09Å1.10Å
CADH3sing1.09Å1.10Å
CADH4sing1.09Å1.10Å
NALH5sing1.01Å1.00Å
CAEH7sing1.09Å1.10Å
CAEH8sing1.09Å1.10Å
CAGH9sing1.09Å1.10Å
CAGH10sing1.09Å1.10Å
CAPH11sing1.09Å1.10Å
CAHH12sing1.09Å1.10Å
CAHH13sing1.09Å1.10Å
CACH14sing1.08Å1.08Å
C2H15sing1.08Å1.08Å
NAAH16sing0.97Å1.00Å
NAAH17sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
NALCAECAG109.5°109.6°
CAENALCAD109.7°111.2°
CAENALH5109.4°111.0°
NALCAEH7109.5°109.5°
NALCAEH8109.5°109.4°
CAECAGCAP111.4°109.3°
CAGCAEH7109.4°109.5°
CAGCAEH8109.5°109.5°
CAECAGH9109.0°109.5°
CAECAGH10109.0°109.5°
NALCADCAF109.0°109.5°
NALCADH3109.6°109.4°
NALCADH4109.6°109.4°
CADNALH5109.4°111.0°
CADCAFCAP111.5°109.3°
CADCAFH1109.0°109.5°
CADCAFH2109.0°109.5°
CAFCADH3109.6°109.4°
CAFCADH4109.6°109.5°
CAGCAPCAF110.1°109.1°
CAGCAPCAH110.3°109.5°
CAPCAGH9109.0°109.5°
CAPCAGH10109.0°109.5°
CAGCAPH11109.2°109.4°
CAFCAPCAH108.8°109.6°
CAPCAFH1108.9°109.4°
CAPCAFH2108.9°109.5°
CAFCAPH11109.2°109.5°
CAPCAHNAQ113.3°109.4°
CAHCAPH11109.2°109.6°
CAPCAHH12108.5°109.5°
CAPCAHH13108.5°109.5°
CAHNAQNAK124.7°125.9°
CAHNAQC4124.1°125.9°
NAQCAHH12108.5°109.5°
NAQCAHH13108.5°109.5°
NAKNAQC4111.2°108.2°
NAQNAKCAC109.8°109.7°
NAQC4N3134.4°134.6°
NAQC4C5105.5°106.6°
NAKCACC5107.3°108.5°
NAKCACH14126.4°125.8°
N3C4C5120.2°118.9°
C4N3C2119.8°120.6°
C4C5CAC106.2°107.0°
C4C5C6118.7°118.3°
N3C2N1121.8°122.6°
N3C2H15119.1°118.6°
CACC5C6135.1°134.7°
C5CACH14126.3°125.7°
C5C6N1118.5°118.4°
C5C6NAA120.9°120.8°
C2N1C6121.1°121.2°
N1C2H15119.1°118.7°
N1C6NAA120.6°120.8°
C6NAAH16109.5°120.0°
C6NAAH17109.5°120.0°
H1CAFH2109.5°109.5°
H3CADH4109.5°109.5°
H7CAEH8109.5°109.4°
H9CAGH10109.5°109.5°
H12CAHH13109.5°109.6°
H16NAAH17109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
NALCAECAGH7120.0°120.1°
NALCAECAGH8120.0°120.0°
CAENALCADH5120.0°124.1°
CAENALCADCAF64.7°61.7°
NALCAECAGCAP57.2°59.1°
CAENALCADH355.2°178.3°
CAENALCADH4175.4°58.3°
NALCAEH7H8120.0°119.9°
NALCAECAGH963.1°60.8°
NALCAECAGH10177.5°179.1°
CAGCAENALCAD64.3°61.7°
CAECAGCAPH9120.3°119.9°
CAECAGCAPH10120.3°120.0°
CAECAGCAPCAF50.6°57.5°
CAECAGCAPCAH170.7°177.5°
CAGCAENALH5175.6°174.2°
CAGCAEH7H8120.0°120.0°
CAECAGH9H10119.1°120.1°
CAECAGCAPH1169.3°62.3°
NALCADCAFH3119.9°120.0°
NALCADCAFH4119.9°120.0°
NALCADCAFCAP58.3°59.2°
NALCADCAFH1178.6°179.1°
NALCADCAFH262.0°60.8°
NALCADH3H4120.2°119.9°
CADNALCAEH7175.7°178.2°
CADNALCAEH855.7°58.3°
CADCAFCAPCAG51.3°57.6°
CADCAFCAPH1120.3°120.0°
CADCAFCAPH2120.3°120.0°
CADCAFCAPCAH172.3°177.5°
CADCAFH1H2119.1°120.2°
CAFCADH3H4120.2°120.1°
CAFCADNALH5175.3°174.1°
CADCAFCAPH1168.6°62.2°
CAGCAPCAFCAH121.0°119.9°
CAGCAPCAFH11119.9°119.8°
CAGCAPCAHH11120.0°120.1°
CAGCAPCAHNAQ59.5°175.0°
CAGCAPCAFH1171.6°177.5°
CAGCAPCAFH269.0°62.4°
CAPCAGCAEH7177.3°179.2°
CAPCAGCAEH862.8°60.9°
CAPCAGH9H10119.1°120.1°
CAGCAPCAHH12179.9°65.1°
CAGCAPCAHH1361.1°55.0°
CAFCAPCAHH11119.1°120.2°
CAFCAPCAHNAQ179.7°65.3°
CAPCAFH1H2119.0°120.0°
CAPCAFCADH361.6°179.1°
CAPCAFCADH4178.2°60.8°
CAFCAPCAGH969.7°62.4°
CAFCAPCAGH10170.9°177.5°
CAFCAPCAHH1259.1°54.6°
CAFCAPCAHH1359.8°174.7°
CAPCAHNAQH12120.6°119.9°
CAPCAHNAQH13120.6°120.0°
CAPCAHNAQNAK101.4°90.1°
CAPCAHNAQC479.5°90.3°
CAHCAPCAFH167.4°62.5°
CAHCAPCAFH252.0°57.5°
CAHCAPCAGH950.4°57.6°
CAHCAPCAGH1069.0°62.5°
CAPCAHH12H13118.3°120.0°
CAHNAQNAKC4179.2°179.6°
CAHNAQNAKCAC179.7°179.9°
CAHNAQC4N30.8°0.1°
CAHNAQC4C5179.6°179.9°
NAQCAHCAPH1160.5°54.9°
NAQCAHH12H13118.2°120.1°
NAKNAQC4N3180.0°179.8°
NAKNAQC4C50.4°0.4°
NAQNAKCACC50.4°0.0°
NAKNAQCAHH12138.0°29.9°
NAKNAQCAHH1319.2°150.0°
NAQNAKCACH14179.6°179.9°
C4NAQNAKCAC0.5°0.3°
NAQC4N3C5179.5°179.7°
NAQC4N3C2179.6°180.0°
NAQC4C5CAC0.2°0.4°
NAQC4C5C6179.6°179.8°
C4NAQCAHH1241.1°149.7°
C4NAQCAHH13159.9°29.6°
NAKCACC5C40.1°0.2°
NAKCACC5H14180.0°180.0°
NAKCACC5C6179.8°180.0°
N3C4C5CAC179.8°179.8°
N3C4C5C60.1°0.0°
C4N3C2N10.1°0.0°
C4N3C2H15179.9°179.9°
C5C4N3C20.1°0.2°
C4C5CACC6179.7°179.7°
C4C5C6N10.2°0.4°
C4C5C6NAA180.0°179.7°
C4C5CACH14179.9°179.8°
N3C2N1H15180.0°180.0°
N3C2N1C60.0°0.4°
CACC5C6N1179.8°179.3°
CACC5C6NAA0.3°0.0°
C5C6N1C20.2°0.6°
C5C6N1NAA179.8°179.3°
C6C5CACH140.2°0.1°
C5C6NAAH16179.8°0.0°
C5C6NAAH1759.8°180.0°
C2N1C6NAA180.0°179.9°
C6N1C2H15180.0°179.6°
N1C6NAAH160.0°179.3°
N1C6NAAH17120.0°0.8°
C6NAAH16H17120.0°179.9°
H1CAFCADH358.7°61.0°
H1CAFCADH461.5°59.1°
H1CAFCAPH1151.7°57.8°
H2CAFCADH3178.1°59.2°
H2CAFCADH457.9°179.2°
H2CAFCAPH11171.1°177.8°
H3CADNALH564.8°54.2°
H4CADNALH555.4°65.8°
H5NALCAEH755.7°54.1°
H5NALCAEH864.3°65.8°
H7CAECAGH957.0°59.3°
H7CAECAGH1062.5°60.8°
H8CAECAGH9176.9°179.2°
H8CAECAGH1057.5°59.1°
H9CAGCAPH11170.4°177.8°
H10CAGCAPH1151.0°57.7°
H11CAPCAHH1260.0°174.8°
H11CAPCAHH13178.9°65.1°

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon