B3D
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
OE1 | CD | sing | 1.34Å | 1.26Å | |
OE1 | HE1 | sing | 0.97Å | 0.95Å | |
CD | OE2 | doub | 1.21Å | 1.25Å | |
CD | CG | sing | 1.51Å | 1.50Å | |
CG | CA | sing | 1.53Å | 1.53Å | |
CG | HG3 | sing | 1.09Å | 1.10Å | |
CG | HG2 | sing | 1.09Å | 1.10Å | |
CA | N | sing | 1.47Å | 1.46Å | |
CA | CB | sing | 1.53Å | 1.53Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CB | C | sing | 1.51Å | 1.51Å | |
CB | HB1 | sing | 1.09Å | 1.10Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
C | OXT | sing | 1.34Å | 1.34Å | |
C | O | doub | 1.21Å | 1.24Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CD | OE1 | HE1 | 109.5° | 117.0° |
OE1 | CD | OE2 | 121.7° | 120.0° |
OE1 | CD | CG | 122.1° | 120.0° |
OE2 | CD | CG | 116.2° | 120.0° |
CD | CG | CA | 115.8° | 109.5° |
CD | CG | HG3 | 107.9° | 109.5° |
CD | CG | HG2 | 107.9° | 109.4° |
CA | CG | HG3 | 107.9° | 109.5° |
CA | CG | HG2 | 107.9° | 109.5° |
CG | CA | N | 113.8° | 109.5° |
CG | CA | CB | 106.6° | 109.5° |
CG | CA | HA | 108.6° | 109.4° |
HG3 | CG | HG2 | 109.4° | 109.4° |
N | CA | CB | 109.3° | 109.4° |
N | CA | HA | 109.6° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
CB | CA | HA | 108.7° | 109.5° |
CA | CB | C | 108.1° | 109.5° |
CA | CB | HB1 | 109.8° | 109.5° |
CA | CB | HB2 | 109.8° | 109.4° |
H | N | H2 | 109.4° | 111.0° |
C | CB | HB1 | 109.8° | 109.5° |
C | CB | HB2 | 109.8° | 109.5° |
CB | C | OXT | 115.3° | 120.0° |
CB | C | O | 120.9° | 120.0° |
HB1 | CB | HB2 | 109.5° | 109.5° |
OXT | C | O | 123.8° | 119.9° |
C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
OE1 | CD | OE2 | CG | 178.2° | 180.0° |
OE1 | CD | CG | CA | 63.7° | 180.0° |
OE1 | CD | CG | HG3 | 57.2° | 60.0° |
OE1 | CD | CG | HG2 | 175.3° | 60.0° |
HE1 | OE1 | CD | OE2 | 0.0° | 0.1° |
HE1 | OE1 | CD | CG | 178.1° | 180.0° |
OE2 | CD | CG | CA | 118.1° | 0.0° |
OE2 | CD | CG | HG3 | 121.0° | 120.0° |
OE2 | CD | CG | HG2 | 2.9° | 120.0° |
CD | CG | CA | HG3 | 121.0° | 120.0° |
CD | CG | CA | HG2 | 120.9° | 120.0° |
CD | CG | HG3 | HG2 | 117.1° | 120.0° |
CD | CG | CA | N | 30.8° | 65.0° |
CD | CG | CA | CB | 151.4° | 175.0° |
CD | CG | CA | HA | 91.6° | 55.0° |
CA | CG | HG3 | HG2 | 117.1° | 120.0° |
CG | CA | N | CB | 119.1° | 120.0° |
CG | CA | N | HA | 121.9° | 120.0° |
CG | CA | CB | HA | 116.9° | 120.0° |
CG | CA | N | H | 180.0° | 63.9° |
CG | CA | N | H2 | 60.0° | 60.0° |
CG | CA | CB | C | 145.7° | 175.0° |
CG | CA | CB | HB1 | 25.9° | 65.0° |
CG | CA | CB | HB2 | 94.5° | 55.0° |
HG3 | CG | CA | N | 151.8° | 55.0° |
HG3 | CG | CA | CB | 87.6° | 65.0° |
HG3 | CG | CA | HA | 29.3° | 175.0° |
HG2 | CG | CA | N | 90.1° | 175.0° |
HG2 | CG | CA | CB | 30.5° | 55.0° |
HG2 | CG | CA | HA | 147.5° | 65.0° |
N | CA | CB | HA | 119.6° | 120.0° |
CA | N | H | H2 | 120.0° | 124.0° |
N | CA | CB | C | 90.9° | 65.0° |
N | CA | CB | HB1 | 149.4° | 55.0° |
N | CA | CB | HB2 | 29.0° | 175.0° |
CB | CA | N | H | 60.9° | 176.0° |
CB | CA | N | H2 | 59.1° | 60.0° |
CA | CB | C | HB1 | 119.8° | 120.0° |
CA | CB | C | HB2 | 119.8° | 120.0° |
CA | CB | HB1 | HB2 | 120.6° | 120.0° |
CA | CB | C | OXT | 96.8° | 180.0° |
CA | CB | C | O | 82.3° | 0.0° |
HA | CA | N | H | 58.2° | 56.1° |
HA | CA | N | H2 | 178.1° | 180.0° |
HA | CA | CB | C | 28.8° | 55.0° |
HA | CA | CB | HB1 | 91.0° | 175.0° |
HA | CA | CB | HB2 | 148.6° | 65.0° |
C | CB | HB1 | HB2 | 120.6° | 120.0° |
CB | C | OXT | O | 179.1° | 180.0° |
CB | C | OXT | HXT | 179.0° | 180.0° |
HB1 | CB | C | OXT | 143.4° | 60.0° |
HB1 | CB | C | O | 37.5° | 120.0° |
HB2 | CB | C | OXT | 23.0° | 60.0° |
HB2 | CB | C | O | 157.9° | 119.9° |
O | C | OXT | HXT | 0.0° | 0.0° |