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B1W

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O3'C3'sing1.43Å1.44Å
O4'C4'sing1.43Å1.44Å
C3'C4'sing1.53Å1.51Å
C3'C2'sing1.53Å1.54Å
C4'C5'sing1.53Å1.54Å
O2'C2'sing1.43Å1.42Å
C2'C1'sing1.53Å1.55Å
O6'C6'sing1.43Å1.42Å
C5'C6'sing1.53Å1.52Å
C5'O5'sing1.43Å1.43Å
C1'O5'sing1.43Å1.42Å
C1'C1sing1.51Å1.48Å
N2C1doub1.31Å1.35ÅAromatic
N2N3sing1.29Å1.39ÅAromatic
C1N5sing1.36Å1.35ÅAromatic
N3C4doub1.32Å1.33ÅAromatic
N5C4sing1.37Å1.36ÅAromatic
C4C6sing1.48Å1.48Å
C6C7doub1.40Å1.41ÅAromatic
C6C11sing1.40Å1.39ÅAromatic
C7C8sing1.38Å1.39ÅAromatic
C11C10doub1.38Å1.40ÅAromatic
C8C9doub1.39Å1.39ÅAromatic
C10C9sing1.39Å1.39ÅAromatic
C9N12sing1.40Å1.36Å
C10H1sing1.08Å1.08Å
C11H2sing1.08Å1.08Å
O4'H3sing0.97Å0.95Å
C4'H4sing1.09Å1.10Å
C5'H5sing1.09Å1.10Å
C6'H6sing1.09Å1.10Å
C6'H7sing1.09Å1.10Å
O6'H8sing0.97Å0.95Å
C3'H9sing1.09Å1.10Å
O3'H10sing0.97Å0.95Å
C2'H11sing1.09Å1.10Å
O2'H12sing0.97Å0.95Å
C1'H13sing1.09Å1.10Å
N5H14sing0.97Å1.00Å
C7H15sing1.08Å1.08Å
C8H16sing1.08Å1.08Å
N12H17sing0.97Å1.00Å
N12H18sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O3'C3'C4'109.0°109.5°
O3'C3'C2'110.8°109.6°
O3'C3'H9109.9°109.6°
C3'O3'H10109.5°114.0°
O4'C4'C3'109.7°109.6°
O4'C4'C5'109.8°109.5°
C4'O4'H3109.5°113.9°
O4'C4'H4109.3°109.6°
C4'C3'C2'109.5°109.1°
C3'C4'C5'111.6°109.1°
C3'C4'H4108.4°109.6°
C4'C3'H9109.0°109.5°
C3'C2'O2'110.1°109.5°
C3'C2'C1'110.5°109.2°
C2'C3'H9108.6°109.6°
C3'C2'H11108.1°109.5°
C4'C5'C6'110.7°109.5°
C4'C5'O5'110.1°109.4°
C5'C4'H4108.0°109.5°
C4'C5'H5108.2°109.5°
O2'C2'C1'110.7°109.5°
O2'C2'H11109.5°109.6°
C2'O2'H12109.5°114.0°
C2'C1'O5'107.0°109.4°
C2'C1'C1111.0°109.5°
C1'C2'H11107.9°109.5°
C2'C1'H13109.6°109.5°
O6'C6'C5'110.9°109.5°
O6'C6'H6109.1°109.5°
O6'C6'H7109.1°109.5°
C6'O6'H8109.5°114.0°
C6'C5'O5'109.7°109.5°
C6'C5'H5108.5°109.5°
C5'C6'H6109.1°109.5°
C5'C6'H7109.1°109.5°
C5'O5'C1'111.4°114.1°
O5'C5'H5109.6°109.5°
O5'C1'C1107.4°109.5°
O5'C1'H13111.4°109.5°
C1'C1N2123.4°126.3°
C1'C1N5128.4°126.3°
C1C1'H13110.5°109.5°
C1N2N3109.4°110.1°
N2C1N5108.2°107.4°
N2N3C4103.9°109.7°
C1N5C4106.2°105.8°
C1N5H14126.9°127.1°
N3C4N5112.3°107.0°
N3C4C6126.3°126.5°
N5C4C6121.4°126.5°
C4N5H14126.9°127.1°
C4C6C7116.2°120.1°
C4C6C11123.7°120.0°
C7C6C11120.1°119.9°
C6C7C8120.0°120.0°
C6C7H15120.0°120.0°
C6C11C10119.3°119.9°
C6C11H2120.4°120.1°
C7C8C9119.8°120.0°
C8C7H15120.0°120.0°
C7C8H16120.1°120.0°
C11C10C9120.3°120.0°
C11C10H1119.8°120.0°
C10C11H2120.3°120.0°
C8C9C10120.5°120.1°
C8C9N12119.8°119.9°
C9C8H16120.1°119.9°
C10C9N12119.8°119.9°
C9C10H1119.9°120.0°
C9N12H17109.5°120.0°
C9N12H18109.4°120.0°
H6C6'H7109.5°109.4°
H17N12H18109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O3'C3'C4'O4'67.2°63.3°
O3'C3'C4'C2'121.4°119.9°
O3'C3'C4'H9119.9°120.2°
O3'C3'C2'H9120.8°120.3°
O3'C3'C4'C5'171.0°176.9°
O3'C3'C2'O2'63.7°63.3°
O3'C3'C2'C1'173.7°176.8°
O3'C3'C4'H452.2°57.0°
O3'C3'C2'H1155.8°56.9°
O4'C4'C3'C5'121.9°119.9°
O4'C4'C3'H4119.4°120.2°
O4'C4'C3'C2'171.5°176.8°
O4'C4'C5'H4119.1°120.1°
O4'C4'C5'C6'62.4°62.5°
O4'C4'C5'O5'176.2°177.5°
O4'C4'C5'H556.4°57.5°
O4'C4'C3'H952.8°57.0°
C4'C3'C2'H9118.9°119.9°
C3'C4'C5'H4119.0°119.9°
C4'C3'C2'O2'176.0°176.9°
C4'C3'C2'C1'53.4°57.0°
C3'C4'C5'C6'175.8°177.6°
C3'C4'C5'O5'54.4°57.6°
C3'C4'O4'H3180.0°60.4°
C3'C4'C5'H565.4°62.4°
C4'C3'O3'H10180.0°180.0°
C4'C3'C2'H1164.5°62.9°
C2'C3'C4'C5'49.6°57.0°
C3'C2'O2'C1'122.5°119.7°
C3'C2'O2'H11118.7°120.1°
C3'C2'C1'H11117.9°119.9°
C3'C2'C1'O5'61.1°57.6°
C3'C2'C1'C1177.9°177.6°
C2'C3'C4'H469.2°62.9°
C2'C3'O3'H1059.5°60.5°
C3'C2'O2'H12180.0°60.0°
C3'C2'C1'H1359.8°62.4°
C4'C5'C6'O6'53.7°175.0°
C4'C5'C6'O5'121.7°119.9°
C4'C5'C6'H5118.6°120.0°
C4'C5'O5'H5118.9°120.0°
C4'C5'O5'C1'64.1°61.2°
C5'C4'O4'H357.1°180.0°
C4'C5'C6'H666.6°55.0°
C4'C5'C6'H7173.9°64.9°
C5'C4'C3'H969.1°62.9°
O2'C2'C1'H11119.8°120.2°
O2'C2'C1'O5'176.7°177.5°
O2'C2'C1'C159.9°62.5°
O2'C2'C3'H957.1°57.0°
O2'C2'C1'H1362.4°57.5°
C2'C1'O5'C5'66.8°61.2°
C2'C1'O5'C1119.2°120.0°
C2'C1'O5'H13119.8°120.0°
C2'C1'C1H13121.8°120.1°
C2'C1'C1N239.3°55.3°
C2'C1'C1N5142.1°125.0°
C1'C2'C3'H965.5°62.9°
C1'C2'O2'H1257.5°179.7°
O6'C6'C5'H6120.2°120.0°
O6'C6'C5'H7120.2°120.1°
O6'C6'C5'O5'68.0°65.1°
O6'C6'C5'H5172.3°54.9°
O6'C6'H6H7119.3°120.0°
C6'C5'O5'H5119.0°120.0°
C6'C5'O5'C1'173.9°178.8°
C6'C5'C4'H456.8°57.6°
C5'C6'H6H7119.3°120.0°
C5'C6'O6'H8180.0°180.0°
C5'O5'C1'C1174.0°178.8°
O5'C5'C4'H464.6°62.4°
O5'C5'C6'H6171.8°174.9°
O5'C5'C6'H752.2°55.0°
C5'O5'C1'H1352.9°58.8°
O5'C1'C1H13121.6°120.0°
O5'C1'C1N277.4°64.7°
O5'C1'C1N5101.2°115.1°
C1'O5'C5'H554.9°58.8°
O5'C1'C2'H1156.9°62.3°
C1'C1N2N5178.8°179.8°
C1'C1N2N3178.6°179.8°
C1'C1N5C4178.6°180.0°
C1C1'C2'H1160.0°57.7°
C1'C1N5H141.3°0.1°
C1N2N3C40.2°0.3°
N2C1N5C40.2°0.2°
N2C1C1'H13161.0°175.3°
N2C1N5H14179.9°179.9°
N3N2C1N50.2°0.0°
N2N3C4N50.1°0.4°
N2N3C4C6179.7°180.0°
C1N5C4N30.1°0.4°
C1N5C4H14180.0°179.9°
C1N5C4C6179.8°180.0°
N5C1C1'H1320.4°4.9°
N3C4N5C6179.8°179.7°
N3C4C6C712.4°0.4°
N3C4C6C11167.1°179.3°
N3C4N5H14180.0°179.7°
N5C4C6C7167.3°180.0°
N5C4C6C1113.2°0.3°
C4C6C7C11179.5°179.7°
C4C6C7C8179.8°180.0°
C4C6C11C10180.0°180.0°
C4C6C11H20.0°0.1°
C6C4N5H140.2°0.1°
C4C6C7H150.2°0.0°
C6C7C8H15180.0°180.0°
C7C6C11C100.4°0.3°
C6C7C8C90.7°0.0°
C7C6C11H2179.5°179.8°
C6C7C8H16179.3°180.0°
C11C6C7C80.7°0.3°
C6C11C10H2180.0°179.9°
C6C11C10C90.3°0.1°
C6C11C10H1179.7°179.7°
C11C6C7H15179.4°179.7°
C7C8C9H16180.0°180.0°
C7C8C9C100.5°0.3°
C7C8C9N12179.9°180.0°
C11C10C9C80.3°0.2°
C11C10C9H1180.0°179.8°
C11C10C9N12179.7°180.0°
C8C9C10N12179.5°179.8°
C8C9C10H1179.7°180.0°
C9C8C7H15179.4°180.0°
C8C9N12H17180.0°179.8°
C8C9N12H1860.0°0.2°
C9C10C11H2179.7°180.0°
C10C9C8H16179.5°179.7°
C10C9N12H170.5°0.0°
C10C9N12H18120.5°180.0°
N12C9C10H10.3°0.2°
N12C9C8H160.0°0.1°
C9N12H17H18120.0°180.0°
H1C10C11H20.3°0.2°
H3O4'C4'H461.2°59.9°
H4C4'C5'H5175.6°177.7°
H4C4'C3'H9172.1°177.2°
H5C5'C6'H652.1°65.1°
H5C5'C6'H767.5°175.0°
H6C6'O6'H859.7°60.0°
H7C6'O6'H859.8°59.9°
H9C3'O3'H1060.6°59.8°
H9C3'C2'H11176.6°177.2°
H11C2'O2'H1261.3°60.2°
H11C2'C1'H13177.8°177.7°
H15C7C8H160.7°0.0°

246905

PDB entries from 2025-12-31

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