AZZ
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O5' | C5' | sing | 1.43Å | 1.42Å | |
| C5' | C4' | sing | 1.53Å | 1.51Å | |
| C4' | O4' | sing | 1.44Å | 1.44Å | |
| C4' | C3' | sing | 1.55Å | 1.53Å | |
| O4' | C1' | sing | 1.44Å | 1.44Å | |
| C3' | N3' | sing | 1.46Å | 1.47Å | |
| C3' | C2' | sing | 1.55Å | 1.55Å | |
| N3' | N4' | doub | 1.12Å | 1.13Å | |
| N4' | N5' | doub | 1.12Å | 1.13Å | |
| C2' | C1' | sing | 1.54Å | 1.56Å | |
| C1' | N1 | sing | 1.46Å | 1.51Å | |
| N1 | C2 | sing | 1.35Å | 1.38Å | |
| N1 | C6 | sing | 1.37Å | 1.41Å | |
| C2 | O2 | doub | 1.22Å | 1.23Å | |
| C2 | N3 | sing | 1.35Å | 1.37Å | |
| N3 | C4 | sing | 1.35Å | 1.37Å | |
| C4 | O4 | doub | 1.22Å | 1.23Å | |
| C4 | C5 | sing | 1.42Å | 1.44Å | |
| C5 | C5A | sing | 1.51Å | 1.51Å | |
| C5 | C6 | doub | 1.35Å | 1.37Å | |
| O5' | HO5' | sing | 0.97Å | 0.95Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'A | sing | 1.09Å | 1.10Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| C2' | H2'A | sing | 1.09Å | 1.10Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| N3 | HN3 | sing | 0.97Å | 1.00Å | |
| C5A | H5A | sing | 1.09Å | 1.10Å | |
| C5A | H5AA | sing | 1.09Å | 1.10Å | |
| C5A | H5AB | sing | 1.09Å | 1.10Å | |
| C6 | H6 | sing | 1.08Å | 1.08Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O5' | C5' | C4' | 109.7° | 109.5° |
| C5' | O5' | HO5' | 109.5° | 114.0° |
| O5' | C5' | H5' | 109.4° | 109.5° |
| O5' | C5' | H5'A | 109.4° | 109.5° |
| C5' | C4' | O4' | 109.4° | 110.6° |
| C5' | C4' | C3' | 109.8° | 110.6° |
| C4' | C5' | H5' | 109.4° | 109.5° |
| C4' | C5' | H5'A | 109.4° | 109.5° |
| C5' | C4' | H4' | 110.0° | 110.5° |
| O4' | C4' | C3' | 106.9° | 103.5° |
| C4' | O4' | C1' | 108.7° | 107.0° |
| O4' | C4' | H4' | 111.0° | 110.6° |
| C4' | C3' | N3' | 111.6° | 110.9° |
| C4' | C3' | C2' | 103.5° | 102.1° |
| C3' | C4' | H4' | 109.7° | 110.7° |
| C4' | C3' | H3' | 108.8° | 110.9° |
| O4' | C1' | C2' | 107.7° | 107.3° |
| O4' | C1' | N1 | 107.5° | 109.9° |
| O4' | C1' | H1' | 110.4° | 109.8° |
| N3' | C3' | C2' | 114.6° | 110.9° |
| C3' | N3' | N4' | 120.8° | 120.0° |
| N3' | C3' | H3' | 109.5° | 110.8° |
| C3' | C2' | C1' | 104.6° | 104.2° |
| C2' | C3' | H3' | 108.6° | 110.9° |
| C3' | C2' | H2' | 110.7° | 110.5° |
| C3' | C2' | H2'A | 110.7° | 110.5° |
| N3' | N4' | N5' | 179.3° | 179.9° |
| C2' | C1' | N1 | 113.1° | 109.9° |
| C1' | C2' | H2' | 110.7° | 110.5° |
| C1' | C2' | H2'A | 110.7° | 110.5° |
| C2' | C1' | H1' | 108.8° | 109.9° |
| C1' | N1 | C2 | 119.3° | 119.7° |
| C1' | N1 | C6 | 121.3° | 119.7° |
| N1 | C1' | H1' | 109.4° | 110.0° |
| C2 | N1 | C6 | 119.4° | 120.6° |
| N1 | C2 | O2 | 120.5° | 119.5° |
| N1 | C2 | N3 | 120.4° | 120.9° |
| N1 | C6 | C5 | 120.8° | 119.7° |
| N1 | C6 | H6 | 119.6° | 120.1° |
| O2 | C2 | N3 | 119.1° | 119.6° |
| C2 | N3 | C4 | 121.3° | 120.3° |
| C2 | N3 | HN3 | 119.3° | 119.8° |
| N3 | C4 | O4 | 119.9° | 120.3° |
| N3 | C4 | C5 | 119.5° | 119.4° |
| C4 | N3 | HN3 | 119.4° | 119.9° |
| O4 | C4 | C5 | 120.6° | 120.3° |
| C4 | C5 | C5A | 121.0° | 120.4° |
| C4 | C5 | C6 | 118.6° | 119.2° |
| C5A | C5 | C6 | 120.4° | 120.4° |
| C5 | C5A | H5A | 109.5° | 109.5° |
| C5 | C5A | H5AA | 109.5° | 109.5° |
| C5 | C5A | H5AB | 109.5° | 109.4° |
| C5 | C6 | H6 | 119.6° | 120.2° |
| H5' | C5' | H5'A | 109.5° | 109.4° |
| H2' | C2' | H2'A | 109.5° | 110.5° |
| H5A | C5A | H5AA | 109.5° | 109.5° |
| H5A | C5A | H5AB | 109.4° | 109.4° |
| H5AA | C5A | H5AB | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O5' | C5' | C4' | H5' | 120.0° | 120.0° |
| O5' | C5' | C4' | H5'A | 120.0° | 120.0° |
| O5' | C5' | C4' | O4' | 62.9° | 66.5° |
| O5' | C5' | C4' | C3' | 179.9° | 179.5° |
| O5' | C5' | H5' | H5'A | 119.9° | 120.0° |
| O5' | C5' | C4' | H4' | 59.2° | 56.4° |
| C5' | C4' | O4' | C3' | 118.9° | 118.5° |
| C5' | C4' | O4' | H4' | 121.5° | 122.8° |
| C5' | C4' | C3' | H4' | 121.0° | 122.9° |
| C5' | C4' | O4' | C1' | 148.2° | 158.6° |
| C5' | C4' | C3' | N3' | 88.8° | 86.3° |
| C5' | C4' | C3' | C2' | 147.4° | 155.5° |
| C4' | C5' | O5' | HO5' | 180.0° | 180.0° |
| C4' | C5' | H5' | H5'A | 119.9° | 120.0° |
| C5' | C4' | C3' | H3' | 32.1° | 37.3° |
| O4' | C4' | C3' | H4' | 120.4° | 118.6° |
| O4' | C4' | C3' | N3' | 152.6° | 155.2° |
| O4' | C4' | C3' | C2' | 28.9° | 37.0° |
| C4' | O4' | C1' | C2' | 17.3° | 26.5° |
| C4' | O4' | C1' | N1 | 139.5° | 146.0° |
| O4' | C4' | C5' | H5' | 57.2° | 53.6° |
| O4' | C4' | C5' | H5'A | 177.1° | 173.5° |
| O4' | C4' | C3' | H3' | 86.5° | 81.2° |
| C4' | O4' | C1' | H1' | 101.3° | 92.9° |
| C3' | C4' | O4' | C1' | 29.4° | 40.1° |
| C4' | C3' | N3' | C2' | 117.2° | 112.7° |
| C4' | C3' | N3' | H3' | 120.6° | 123.7° |
| C4' | C3' | C2' | H3' | 115.5° | 118.2° |
| C4' | C3' | N3' | N4' | 178.7° | 175.0° |
| C4' | C3' | C2' | C1' | 17.7° | 20.9° |
| C3' | C4' | C5' | H5' | 59.9° | 60.5° |
| C3' | C4' | C5' | H5'A | 60.1° | 59.5° |
| C4' | C3' | C2' | H2' | 136.9° | 139.6° |
| C4' | C3' | C2' | H2'A | 101.5° | 97.8° |
| O4' | C1' | C2' | C3' | 1.2° | 2.0° |
| O4' | C1' | C2' | N1 | 118.6° | 119.4° |
| O4' | C1' | C2' | H1' | 119.6° | 119.4° |
| O4' | C1' | N1 | H1' | 119.9° | 121.0° |
| O4' | C1' | N1 | C2 | 55.0° | 53.6° |
| O4' | C1' | N1 | C6 | 124.7° | 126.7° |
| C1' | O4' | C4' | H4' | 90.3° | 78.6° |
| O4' | C1' | C2' | H2' | 120.4° | 116.7° |
| O4' | C1' | C2' | H2'A | 118.0° | 120.7° |
| N3' | C3' | C2' | H3' | 122.8° | 123.6° |
| C3' | N3' | N4' | N5' | 96.0° | 27.7° |
| N3' | C3' | C2' | C1' | 139.5° | 139.1° |
| N3' | C3' | C4' | H4' | 32.1° | 36.6° |
| N3' | C3' | C2' | H2' | 101.3° | 102.2° |
| N3' | C3' | C2' | H2'A | 20.3° | 20.4° |
| C2' | C3' | N3' | N4' | 64.1° | 72.3° |
| C3' | C2' | C1' | H2' | 119.2° | 118.7° |
| C3' | C2' | C1' | H2'A | 119.2° | 118.7° |
| C3' | C2' | C1' | N1 | 117.5° | 121.4° |
| C2' | C3' | C4' | H4' | 91.6° | 81.6° |
| C3' | C2' | H2' | H2'A | 122.3° | 122.6° |
| C3' | C2' | C1' | H1' | 120.8° | 117.4° |
| N4' | N3' | C3' | H3' | 58.1° | 51.3° |
| C2' | C1' | N1 | H1' | 121.4° | 121.1° |
| C2' | C1' | N1 | C2 | 173.7° | 64.3° |
| C2' | C1' | N1 | C6 | 6.0° | 115.5° |
| C1' | C2' | C3' | H3' | 97.8° | 97.3° |
| C1' | C2' | H2' | H2'A | 122.3° | 122.6° |
| C1' | N1 | C2 | C6 | 179.7° | 179.7° |
| C1' | N1 | C2 | O2 | 0.2° | 0.0° |
| C1' | N1 | C2 | N3 | 179.7° | 180.0° |
| C1' | N1 | C6 | C5 | 179.7° | 179.7° |
| N1 | C1' | C2' | H2' | 1.8° | 2.7° |
| N1 | C1' | C2' | H2'A | 123.3° | 119.9° |
| C1' | N1 | C6 | H6 | 0.3° | 0.0° |
| N1 | C2 | O2 | N3 | 179.9° | 180.0° |
| N1 | C2 | N3 | C4 | 0.0° | 0.0° |
| C2 | N1 | C6 | C5 | 0.1° | 0.5° |
| C2 | N1 | C1' | H1' | 64.9° | 174.6° |
| N1 | C2 | N3 | HN3 | 180.0° | 180.0° |
| C2 | N1 | C6 | H6 | 179.9° | 179.7° |
| C6 | N1 | C2 | O2 | 180.0° | 179.7° |
| C6 | N1 | C2 | N3 | 0.0° | 0.3° |
| N1 | C6 | C5 | C4 | 0.1° | 0.5° |
| N1 | C6 | C5 | C5A | 179.9° | 179.7° |
| N1 | C6 | C5 | H6 | 180.0° | 179.7° |
| C6 | N1 | C1' | H1' | 115.4° | 5.7° |
| O2 | C2 | N3 | C4 | 180.0° | 180.0° |
| O2 | C2 | N3 | HN3 | 0.1° | 0.0° |
| C2 | N3 | C4 | HN3 | 180.0° | 180.0° |
| C2 | N3 | C4 | O4 | 179.9° | 180.0° |
| C2 | N3 | C4 | C5 | 0.0° | 0.0° |
| N3 | C4 | O4 | C5 | 179.9° | 180.0° |
| N3 | C4 | C5 | C5A | 179.9° | 180.0° |
| N3 | C4 | C5 | C6 | 0.1° | 0.3° |
| O4 | C4 | C5 | C5A | 0.0° | 0.0° |
| O4 | C4 | C5 | C6 | 179.9° | 179.7° |
| O4 | C4 | N3 | HN3 | 0.1° | 0.0° |
| C4 | C5 | C5A | C6 | 179.9° | 179.7° |
| C5 | C4 | N3 | HN3 | 180.0° | 180.0° |
| C4 | C5 | C5A | H5A | 180.0° | 0.1° |
| C4 | C5 | C5A | H5AA | 60.0° | 120.0° |
| C4 | C5 | C5A | H5AB | 60.0° | 120.0° |
| C4 | C5 | C6 | H6 | 179.9° | 179.7° |
| C5 | C5A | H5A | H5AA | 120.0° | 120.1° |
| C5 | C5A | H5A | H5AB | 120.0° | 120.0° |
| C5 | C5A | H5AA | H5AB | 120.0° | 120.0° |
| C5A | C5 | C6 | H6 | 0.1° | 0.0° |
| C6 | C5 | C5A | H5A | 0.0° | 179.8° |
| C6 | C5 | C5A | H5AA | 120.1° | 59.7° |
| C6 | C5 | C5A | H5AB | 119.9° | 60.3° |
| HO5' | O5' | C5' | H5' | 60.0° | 60.0° |
| HO5' | O5' | C5' | H5'A | 60.0° | 60.0° |
| H5' | C5' | C4' | H4' | 179.3° | 176.5° |
| H5'A | C5' | C4' | H4' | 60.8° | 63.6° |
| H4' | C4' | C3' | H3' | 153.1° | 160.2° |
| H3' | C3' | C2' | H2' | 21.4° | 21.4° |
| H3' | C3' | C2' | H2'A | 143.0° | 144.0° |
| H2' | C2' | C1' | H1' | 120.0° | 123.9° |
| H2'A | C2' | C1' | H1' | 1.6° | 1.3° |
| H5A | C5A | H5AA | H5AB | 119.9° | 119.9° |
