AZT

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
PA	O1A	doub	1.50Å	1.48Å
PA	O2A	sing	1.62Å	1.48Å
PA	O3A	sing	1.62Å	1.59Å
PA	O5'	sing	1.62Å	1.58Å
O2A	HOA2	sing	0.98Å	0.95Å
O3A	PB	sing	1.62Å	1.63Å
PB	O1B	doub	1.50Å	1.47Å
PB	O2B	sing	1.62Å	1.49Å
PB	O3B	sing	1.61Å	1.57Å
O2B	HOB2	sing	0.98Å	0.95Å
O3B	PG	sing	1.62Å	1.61Å
PG	O1G	doub	1.50Å	1.49Å
PG	O2G	sing	1.62Å	1.50Å
PG	O3G	sing	1.62Å	1.60Å
O2G	HOG2	sing	0.98Å	0.95Å
O3G	HOG3	sing	0.98Å	0.95Å
O5'	C5'	sing	1.42Å	1.40Å
C5'	C4'	sing	1.52Å	1.50Å
C5'	H5'1	sing	1.09Å	1.11Å
C5'	H5'2	sing	1.09Å	1.12Å
C4'	O4'	sing	1.44Å	1.44Å
C4'	C3'	sing	1.52Å	1.53Å
C4'	H4'	sing	1.09Å	1.12Å
O4'	C1'	sing	1.43Å	1.42Å
C3'	N3'	sing	1.47Å	1.38Å
C3'	C2'	sing	1.51Å	1.54Å
C3'	H3'	sing	1.09Å	1.11Å
N3'	N4'	doub	1.24Å	1.29Å
N4'	N5'	doub	1.14Å	93.95Å
C2'	C1'	sing	1.52Å	1.51Å
C2'	H2'1	sing	1.10Å	1.11Å
C2'	H2'2	sing	1.09Å	1.11Å
C1'	N1	sing	1.43Å	1.51Å
C1'	H1'	sing	1.10Å	1.11Å
N1	C2	sing	1.41Å	1.41Å
N1	C6	sing	1.39Å	1.40Å
C2	O2	doub	1.23Å	1.28Å
C2	N3	sing	1.40Å	1.38Å
N3	C4	sing	1.39Å	1.36Å
N3	HN3	sing	1.02Å	1.02Å
C4	O4	doub	1.23Å	1.36Å
C4	C5	sing	1.49Å	1.41Å
C5	C5A	sing	1.50Å	1.52Å
C5	C6	doub	1.34Å	1.38Å
C5A	H51	sing	1.09Å	1.11Å
C5A	H52	sing	1.09Å	1.11Å
C5A	H53	sing	1.09Å	1.12Å
C6	H6	sing	1.09Å	1.10Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O1A	PA	O2A	118.8°	114.4°
O1A	PA	O3A	109.3°	114.2°
O1A	PA	O5'	108.2°	114.8°
O2A	PA	O3A	110.4°	103.2°
O2A	PA	O5'	108.4°	104.4°
PA	O2A	HOA2	118.8°	118.9°
O3A	PA	O5'	100.0°	104.5°
PA	O3A	PB	135.5°	131.4°
PA	O5'	C5'	117.0°	120.0°
O3A	PB	O1B	108.0°	115.6°
O3A	PB	O2B	113.6°	104.2°
O3A	PB	O3B	99.1°	101.6°
O1B	PB	O2B	118.8°	114.8°
O1B	PB	O3B	107.5°	115.0°
O2B	PB	O3B	107.8°	103.9°
PB	O2B	HOB2	113.6°	118.9°
PB	O3B	PG	131.7°	131.8°
O3B	PG	O1G	107.7°	114.6°
O3B	PG	O2G	107.6°	103.6°
O3B	PG	O3G	97.3°	103.1°
O1G	PG	O2G	118.9°	115.4°
O1G	PG	O3G	110.4°	115.1°
O2G	PG	O3G	112.6°	103.5°
PG	O2G	HOG2	107.5°	118.9°
PG	O3G	HOG3	97.3°	118.9°
O5'	C5'	C4'	109.7°	109.0°
O5'	C5'	H5'1	112.1°	108.8°
O5'	C5'	H5'2	112.1°	108.8°
C4'	C5'	H5'1	112.1°	110.6°
C4'	C5'	H5'2	112.1°	110.5°
C5'	C4'	O4'	108.8°	107.9°
C5'	C4'	C3'	113.6°	112.6°
C5'	C4'	H4'	106.6°	108.7°
H5'1	C5'	H5'2	98.3°	109.1°
O4'	C4'	C3'	107.6°	106.8°
O4'	C4'	H4'	112.6°	108.2°
C4'	O4'	C1'	109.4°	109.1°
C3'	C4'	H4'	107.8°	112.4°
C4'	C3'	N3'	119.0°	109.0°
C4'	C3'	C2'	103.7°	103.0°
C4'	C3'	H3'	107.2°	113.6°
O4'	C1'	C2'	106.9°	107.1°
O4'	C1'	N1	107.7°	109.4°
O4'	C1'	H1'	113.6°	108.1°
N3'	C3'	C2'	109.8°	109.2°
N3'	C3'	H3'	100.9°	108.6°
C3'	N3'	N4'	174.2°	115.6°
C2'	C3'	H3'	116.9°	113.2°
C3'	C2'	C1'	103.1°	102.5°
C3'	C2'	H2'1	114.6°	109.3°
C3'	C2'	H2'2	114.6°	114.5°
N3'	N4'	N5'	69.0°	179.4°
C1'	C2'	H2'1	114.6°	110.4°
C1'	C2'	H2'2	114.6°	112.3°
C2'	C1'	N1	113.1°	112.7°
C2'	C1'	H1'	108.3°	111.6°
H2'1	C2'	H2'2	95.9°	107.7°
N1	C1'	H1'	107.4°	107.8°
C1'	N1	C2	131.7°	121.4°
C1'	N1	C6	101.8°	118.6°
C2	N1	C6	121.1°	120.0°
N1	C2	O2	118.9°	123.7°
N1	C2	N3	118.3°	115.2°
N1	C6	C5	119.4°	124.6°
N1	C6	H6	120.8°	114.6°
O2	C2	N3	122.7°	121.1°
C2	N3	C4	121.1°	127.0°
C2	N3	HN3	120.1°	116.4°
C4	N3	HN3	118.9°	116.6°
N3	C4	O4	120.2°	123.6°
N3	C4	C5	121.2°	114.8°
O4	C4	C5	118.6°	121.6°
C4	C5	C5A	117.0°	118.0°
C4	C5	C6	118.9°	118.4°
C5A	C5	C6	123.7°	123.6°
C5	C5A	H51	117.0°	109.8°
C5	C5A	H52	109.4°	109.7°
C5	C5A	H53	109.4°	109.7°
C5	C6	H6	119.7°	120.7°
H51	C5A	H52	109.5°	109.3°
H51	C5A	H53	109.5°	109.4°
H52	C5A	H53	100.7°	108.9°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O1A	PA	O2A	O3A	127.4°	124.6°
O1A	PA	O2A	O5'	123.9°	126.3°
O1A	PA	O3A	O5'	113.4°	126.3°
O1A	PA	O2A	HOA2	180.0°	46.3°
O1A	PA	O3A	PB	53.3°	60.0°
O1A	PA	O5'	C5'	9.5°	180.0°
O2A	PA	O3A	O5'	114.1°	109.0°
O2A	PA	O3A	PB	174.2°	175.3°
O2A	PA	O5'	C5'	120.6°	54.0°
O3A	PA	O2A	HOA2	52.6°	170.9°
PA	O3A	PB	O1B	115.9°	60.0°
PA	O3A	PB	O2B	18.2°	67.0°
PA	O3A	PB	O3B	132.2°	174.7°
O3A	PA	O5'	C5'	123.8°	54.1°
O5'	PA	O2A	HOA2	56.1°	80.0°
O5'	PA	O3A	PB	60.1°	66.3°
PA	O5'	C5'	C4'	179.3°	180.0°
PA	O5'	C5'	H5'1	55.5°	59.4°
PA	O5'	C5'	H5'2	54.0°	59.4°
O3A	PB	O1B	O2B	131.3°	121.4°
O3A	PB	O1B	O3B	106.0°	118.1°
O3A	PB	O2B	O3B	108.7°	106.1°
O3A	PB	O2B	HOB2	180.0°	176.2°
O3A	PB	O3B	PG	70.4°	65.7°
O1B	PB	O2B	O3B	122.6°	126.5°
O1B	PB	O2B	HOB2	51.2°	48.8°
O1B	PB	O3B	PG	177.3°	60.0°
O2B	PB	O3B	PG	48.1°	173.7°
O3B	PB	O2B	HOB2	71.3°	77.7°
PB	O3B	PG	O1G	1.6°	59.9°
PB	O3B	PG	O2G	127.7°	173.5°
PB	O3B	PG	O3G	115.8°	65.9°
O3B	PG	O1G	O2G	122.6°	120.2°
O3B	PG	O1G	O3G	105.1°	119.3°
O3B	PG	O2G	O3G	106.0°	107.3°
O3B	PG	O2G	HOG2	180.0°	174.5°
O3B	PG	O3G	HOG3	180.0°	173.9°
O1G	PG	O2G	O3G	131.4°	126.6°
O1G	PG	O2G	HOG2	57.3°	48.4°
O1G	PG	O3G	HOG3	67.9°	48.3°
O2G	PG	O3G	HOG3	67.5°	78.4°
O3G	PG	O2G	HOG2	74.0°	78.2°
O5'	C5'	C4'	H5'1	125.3°	119.5°
O5'	C5'	C4'	H5'2	125.3°	119.5°
O5'	C5'	H5'1	H5'2	118.0°	118.6°
O5'	C5'	C4'	O4'	102.2°	178.1°
O5'	C5'	C4'	C3'	17.5°	60.5°
O5'	C5'	C4'	H4'	136.1°	64.8°
C4'	C5'	H5'1	H5'2	118.0°	121.8°
C5'	C4'	O4'	C3'	123.4°	121.3°
C5'	C4'	O4'	H4'	117.9°	117.4°
C5'	C4'	C3'	H4'	117.9°	123.2°
C5'	C4'	O4'	C1'	131.4°	112.4°
C5'	C4'	C3'	N3'	128.8°	152.6°
C5'	C4'	C3'	C2'	109.0°	91.5°
C5'	C4'	C3'	H3'	15.3°	31.4°
H5'1	C5'	C4'	O4'	132.5°	62.4°
H5'1	C5'	C4'	C3'	107.7°	180.0°
H5'1	C5'	C4'	H4'	10.9°	54.7°
H5'2	C5'	C4'	O4'	23.1°	58.6°
H5'2	C5'	C4'	C3'	142.8°	59.1°
H5'2	C5'	C4'	H4'	98.6°	175.7°
O4'	C4'	C3'	H4'	121.7°	118.5°
O4'	C4'	C3'	N3'	110.8°	89.1°
O4'	C4'	C3'	C2'	11.5°	26.8°
O4'	C4'	C3'	H3'	135.8°	149.7°
C4'	O4'	C1'	C2'	24.8°	12.7°
C4'	O4'	C1'	N1	146.6°	135.2°
C4'	O4'	C1'	H1'	94.6°	107.6°
C3'	C4'	O4'	C1'	8.0°	8.9°
C4'	C3'	N3'	C2'	119.2°	111.8°
C4'	C3'	N3'	H3'	116.8°	124.2°
C4'	C3'	C2'	H3'	117.7°	123.1°
C4'	C3'	N3'	N4'	170.3°	94.2°
C4'	C3'	C2'	C1'	25.1°	33.2°
C4'	C3'	C2'	H2'1	100.2°	84.0°
C4'	C3'	C2'	H2'2	150.3°	155.1°
H4'	C4'	O4'	C1'	110.7°	130.2°
H4'	C4'	C3'	N3'	10.9°	29.4°
H4'	C4'	C3'	C2'	133.2°	145.3°
H4'	C4'	C3'	H3'	102.5°	91.8°
O4'	C1'	C2'	C3'	31.0°	29.1°
O4'	C1'	C2'	N1	118.4°	120.4°
O4'	C1'	C2'	H1'	122.7°	118.1°
O4'	C1'	C2'	H2'1	94.3°	87.3°
O4'	C1'	C2'	H2'2	156.3°	152.5°
O4'	C1'	N1	H1'	122.7°	117.3°
O4'	C1'	N1	C2	126.0°	147.4°
O4'	C1'	N1	C6	80.8°	32.7°
N3'	C3'	C2'	H3'	114.0°	121.1°
C3'	N3'	N4'	N5'	95.0°	175.9°
N3'	C3'	C2'	C1'	103.1°	82.6°
N3'	C3'	C2'	H2'1	131.6°	160.3°
N3'	C3'	C2'	H2'2	22.1°	39.4°
C2'	C3'	N3'	N4'	51.1°	154.0°
C3'	C2'	C1'	H2'1	125.3°	116.4°
C3'	C2'	C1'	H2'2	125.3°	123.4°
C3'	C2'	H2'1	H2'2	120.5°	125.0°
C3'	C2'	C1'	N1	149.4°	149.5°
C3'	C2'	C1'	H1'	91.7°	89.0°
H3'	C3'	N3'	N4'	72.9°	30.1°
H3'	C3'	C2'	C1'	142.8°	156.3°
H3'	C3'	C2'	H2'1	17.6°	39.2°
H3'	C3'	C2'	H2'2	92.0°	81.8°
C1'	C2'	H2'1	H2'2	120.4°	123.0°
C2'	C1'	N1	H1'	119.4°	123.6°
C2'	C1'	N1	C2	116.0°	93.6°
C2'	C1'	N1	C6	37.1°	86.4°
H2'1	C2'	C1'	N1	24.2°	33.1°
H2'1	C2'	C1'	H1'	143.0°	154.6°
H2'2	C2'	C1'	N1	85.3°	87.1°
H2'2	C2'	C1'	H1'	33.6°	34.4°
C1'	N1	C2	C6	148.9°	180.0°
C1'	N1	C2	O2	30.9°	0.0°
C1'	N1	C2	N3	151.2°	180.0°
C1'	N1	C6	C5	158.8°	180.0°
C1'	N1	C6	H6	21.2°	0.0°
H1'	C1'	N1	C2	3.4°	30.0°
H1'	C1'	N1	C6	156.5°	150.0°
N1	C2	O2	N3	177.8°	180.0°
N1	C2	N3	C4	1.5°	0.0°
N1	C2	N3	HN3	178.4°	180.0°
C2	N1	C6	C5	2.0°	0.0°
C2	N1	C6	H6	178.0°	180.0°
C6	N1	C2	O2	179.8°	180.0°
C6	N1	C2	N3	2.3°	0.0°
N1	C6	C5	C4	1.0°	0.1°
N1	C6	C5	C5A	171.1°	180.0°
N1	C6	C5	H6	180.0°	180.0°
O2	C2	N3	C4	179.3°	180.0°
O2	C2	N3	HN3	0.6°	0.0°
C2	N3	C4	HN3	179.9°	179.9°
C2	N3	C4	O4	179.9°	180.0°
C2	N3	C4	C5	0.5°	0.1°
N3	C4	O4	C5	179.6°	179.9°
N3	C4	C5	C5A	172.3°	180.0°
N3	C4	C5	C6	0.2°	0.1°
HN3	N3	C4	O4	0.2°	0.0°
HN3	N3	C4	C5	179.4°	180.0°
O4	C4	C5	C5A	7.2°	0.0°
O4	C4	C5	C6	179.8°	180.0°
C4	C5	C5A	C6	172.2°	179.9°
C4	C5	C5A	H51	180.0°	35.8°
C4	C5	C5A	H52	54.7°	156.0°
C4	C5	C5A	H53	54.7°	84.5°
C4	C5	C6	H6	179.1°	180.0°
C5	C5A	H51	H52	125.3°	120.4°
C5	C5A	H51	H53	125.2°	120.4°
C5	C5A	H52	H53	115.2°	120.1°
C5A	C5	C6	H6	8.9°	0.0°
C6	C5	C5A	H51	7.8°	144.3°
C6	C5	C5A	H52	133.1°	24.1°
C6	C5	C5A	H53	117.5°	95.5°
H51	C5A	H52	H53	115.3°	119.4°

Definition date:	1999-07-08
Last modified:	2011-06-04
Release status:	REL
Processing site:	EBI
Derived from:	8ICO