Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

AYO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O18C17doub1.21Å1.31Å
C17O27sing1.34Å1.30Å
C17C7sing1.51Å1.55Å
C6C7sing1.53Å1.53Å
C6C5sing1.53Å1.52Å
C4C5sing1.53Å1.54Å
C4C1sing1.51Å1.55Å
N2C1sing1.35Å1.37Å
N2C19sing1.40Å1.42Å
C5C8sing1.51Å1.51Å
C1O3doub1.21Å1.22Å
N9C8doub1.30Å1.32ÅAromatic
N9O10sing1.21Å1.35ÅAromatic
C19C20doub1.39Å1.40ÅAromatic
C19C24sing1.39Å1.43ÅAromatic
CL1C24sing1.74Å1.67Å
C20C21sing1.38Å1.42ÅAromatic
C24C23doub1.38Å1.39ÅAromatic
C8C12sing1.41Å1.43ÅAromatic
O10C11sing1.35Å1.33ÅAromatic
C21C22doub1.38Å1.39ÅAromatic
C23C22sing1.38Å1.41ÅAromatic
C22CL2sing1.74Å1.73Å
C12C11doub1.37Å1.37ÅAromatic
C12C13sing1.51Å1.49Å
C11C16sing1.48Å1.49Å
C13C15sing1.53Å1.50Å
C13C14sing1.53Å1.49Å
C16N31doub1.31Å1.31ÅAromatic
C16C28sing1.42Å1.40ÅAromatic
N31O30sing1.21Å1.38ÅAromatic
C15C14sing1.53Å1.50Å
C28C29doub1.35Å1.34ÅAromatic
O30C29sing1.34Å1.39ÅAromatic
C34C33sing1.53Å1.56Å
C29C32sing1.51Å1.49Å
C35C33sing1.53Å1.53Å
C33C32sing1.53Å1.54Å
C33C36sing1.53Å1.55Å
C4H1sing1.09Å1.10Å
C4H2sing1.09Å1.10Å
C5H3sing1.09Å1.10Å
C6H4sing1.09Å1.10Å
C6H5sing1.09Å1.10Å
N2H6sing0.97Å1.00Å
C7H7sing1.09Å1.10Å
C7H8sing1.09Å1.10Å
C13H9sing1.09Å1.10Å
C14H10sing1.09Å1.10Å
C14H11sing1.09Å1.10Å
C15H12sing1.09Å1.10Å
C15H13sing1.09Å1.10Å
O27H14sing0.97Å0.95Å
C23H15sing1.08Å1.08Å
C21H16sing1.08Å1.08Å
C20H17sing1.08Å1.08Å
C28H18sing1.08Å1.08Å
C32H19sing1.09Å1.10Å
C32H20sing1.09Å1.10Å
C36H21sing1.09Å1.10Å
C36H22sing1.09Å1.10Å
C36H23sing1.09Å1.10Å
C35H24sing1.09Å1.10Å
C35H25sing1.09Å1.10Å
C35H26sing1.09Å1.10Å
C34H27sing1.09Å1.10Å
C34H28sing1.09Å1.10Å
C34H29sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O18C17O27131.2°120.0°
O18C17C7115.7°120.0°
O27C17C7113.1°120.0°
C17O27H14109.5°117.0°
C17C7C6110.8°109.5°
C17C7H7109.1°109.4°
C17C7H8109.1°109.5°
C7C6C5115.5°109.5°
C7C6H4107.9°109.4°
C7C6H5107.9°109.5°
C6C7H7109.2°109.5°
C6C7H8109.2°109.5°
C6C5C4108.1°109.5°
C6C5C8122.1°109.5°
C6C5H3105.8°109.4°
C5C6H4108.0°109.5°
C5C6H5107.9°109.4°
C5C4C1116.0°109.5°
C4C5C8108.2°109.5°
C5C4H1107.8°109.4°
C5C4H2107.8°109.4°
C4C5H3105.6°109.5°
C4C1N2114.0°119.9°
C4C1O3123.1°120.0°
C1C4H1107.8°109.5°
C1C4H2107.8°109.5°
C1N2C19128.4°119.9°
N2C1O3123.0°120.0°
C1N2H6115.8°120.0°
N2C19C20125.4°120.1°
N2C19C24117.7°120.0°
C19N2H6115.8°120.0°
C5C8N9115.0°126.7°
C5C8C12136.3°126.7°
C8C5H3106.0°109.5°
C8N9O10107.4°112.0°
N9C8C12108.5°106.6°
N9O10C11111.1°111.4°
C20C19C24116.5°119.9°
C19C20C21119.6°120.0°
C19C20H17120.2°120.0°
C19C24CL1117.3°120.1°
C19C24C23124.8°119.9°
CL1C24C23117.9°120.0°
C20C21C22122.0°120.1°
C20C21H16119.0°119.9°
C21C20H17120.2°120.0°
C24C23C22117.0°120.1°
C24C23H15121.5°120.0°
C8C12C11105.3°103.9°
C8C12C13123.8°128.1°
O10C11C12107.5°106.2°
O10C11C16117.8°126.9°
C21C22C23120.0°120.1°
C21C22CL2119.0°120.0°
C22C21H16119.0°120.0°
C23C22CL2120.8°119.9°
C22C23H15121.5°120.0°
C11C12C13130.9°128.1°
C12C11C16134.6°126.9°
C12C13C15126.4°117.5°
C12C13C14118.4°117.5°
C12C13H9113.8°115.5°
C11C16N31124.4°127.0°
C11C16C28125.0°127.0°
C15C13C1460.3°60.0°
C13C15C1459.4°60.0°
C15C13H9113.5°117.5°
C13C15H12120.1°117.5°
C13C15H13120.1°117.6°
C13C14C1560.2°60.0°
C14C13H9113.7°117.5°
C13C14H10119.9°117.5°
C13C14H11120.0°117.5°
N31C16C28110.2°106.0°
C16N31O30107.2°111.4°
C16C28C29106.7°104.0°
C16C28H18126.7°128.0°
N31O30C29108.1°111.9°
C15C14H10119.9°117.5°
C15C14H11120.0°117.5°
C14C15H12120.1°117.5°
C14C15H13120.1°117.5°
C28C29O30107.6°106.7°
C28C29C32135.8°126.6°
C29C28H18126.6°128.0°
O30C29C32116.5°126.6°
C34C33C35111.9°109.5°
C34C33C32109.0°109.4°
C34C33C36108.8°109.5°
C33C34H27109.5°109.5°
C33C34H28109.5°109.5°
C33C34H29109.5°109.5°
C29C32C33116.2°109.5°
C29C32H19107.8°109.5°
C29C32H20107.8°109.5°
C35C33C32110.8°109.5°
C35C33C36108.1°109.5°
C33C35H24109.5°109.5°
C33C35H25109.5°109.4°
C33C35H26109.5°109.5°
C32C33C36108.2°109.5°
C33C32H19107.7°109.4°
C33C32H20107.8°109.5°
C33C36H21109.5°109.5°
C33C36H22109.5°109.4°
C33C36H23109.5°109.5°
H1C4H2109.5°109.4°
H4C6H5109.5°109.5°
H7C7H8109.5°109.4°
H10C14H11109.5°115.5°
H12C15H13109.4°115.5°
H19C32H20109.5°109.5°
H21C36H22109.5°109.4°
H21C36H23109.5°109.5°
H22C36H23109.5°109.4°
H24C35H25109.5°109.5°
H24C35H26109.5°109.5°
H25C35H26109.5°109.5°
H27C34H28109.5°109.4°
H27C34H29109.5°109.4°
H28C34H29109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O18C17O27C7178.4°179.9°
O18C17C7C661.5°0.1°
O18C17C7H758.7°120.0°
O18C17C7H8178.3°120.0°
O18C17O27H140.0°0.0°
O27C17C7C6119.8°180.0°
O27C17C7H7120.0°60.0°
O27C17C7H80.4°59.9°
C17C7C6H7120.2°119.9°
C17C7C6H8120.2°120.1°
C17C7C6C5177.2°175.2°
C17C7C6H461.9°64.8°
C17C7C6H556.4°55.2°
C17C7H7H8119.4°120.0°
C7C17O27H14178.4°179.9°
C7C6C5H4120.9°120.0°
C7C6C5H5120.9°120.0°
C7C6C5C4170.3°174.5°
C7C6C5C863.4°65.5°
C7C6C5H357.5°54.6°
C7C6H4H5117.3°120.0°
C6C7H7H8119.4°120.0°
C6C5C4C8134.0°120.0°
C6C5C4H3112.9°120.0°
C6C5C4C1179.0°174.1°
C6C5C8H3120.9°120.0°
C6C5C8N947.6°60.3°
C6C5C8C12138.0°120.0°
C6C5C4H158.0°65.9°
C6C5C4H260.1°54.0°
C5C6H4H5117.2°120.0°
C5C6C7H757.0°55.2°
C5C6C7H862.6°64.7°
C5C4C1H1121.0°120.0°
C5C4C1H2121.0°120.0°
C5C4C1N299.4°175.6°
C4C5C8H3112.8°120.0°
C5C4C1O380.8°4.6°
C4C5C8N978.7°59.7°
C4C5C8C1295.7°120.0°
C5C4H1H2117.0°119.9°
C4C5C6H449.4°65.5°
C4C5C6H568.9°54.5°
C4C1N2O3179.9°179.7°
C4C1N2C19170.7°175.8°
C1C4C5C847.0°65.9°
C1C4H1H2117.0°120.1°
C1C4C5H366.0°54.1°
C4C1N2H69.3°4.2°
C1N2C19H6180.0°180.0°
C1N2C19C2026.3°33.1°
C1N2C19C24146.2°146.7°
N2C1C4H1139.7°64.4°
N2C1C4H221.6°55.6°
C19N2C1O39.1°4.5°
N2C19C20C24172.6°179.8°
N2C19C24CL18.8°0.1°
N2C19C20C21171.3°179.7°
N2C19C24C23173.9°180.0°
N2C19C20H178.7°0.0°
C5C8N9C12175.9°179.8°
C5C8N9O10179.9°179.9°
C5C8C12C11177.1°180.0°
C5C8C12C133.1°0.0°
C8C5C4H1168.0°54.1°
C8C5C4H273.9°174.0°
C8C5C6H4175.7°54.5°
C8C5C6H557.4°174.5°
O3C1C4H140.2°115.3°
O3C1C4H2158.3°124.6°
O3C1N2H6170.8°175.5°
C8N9O10C114.5°0.2°
N9C8C12C112.4°0.3°
N9C8C12C13177.7°179.8°
N9C8C5H3168.5°179.7°
O10N9C8C124.2°0.3°
N9O10C11C123.0°0.0°
N9O10C11C16174.4°179.8°
C20C19C24CL1178.0°179.7°
C19C20C21H17180.0°179.7°
C20C19C24C230.7°0.2°
C19C20C21C220.6°0.6°
C20C19N2H6153.7°146.9°
C19C20C21H16179.4°179.7°
C19C24CL1C23177.5°179.9°
C24C19C20C211.3°0.5°
C19C24C23C223.3°0.0°
C24C19N2H633.7°33.3°
C19C24C23H15176.7°180.0°
C24C19C20H17178.6°179.7°
CL1C24C23C22179.3°179.9°
CL1C24C23H150.7°0.1°
C20C21C22H16180.0°179.7°
C20C21C22C232.2°0.3°
C20C21C22CL2176.9°179.7°
C24C23C22C214.0°0.0°
C24C23C22H15180.0°180.0°
C24C23C22CL2178.6°180.0°
C8C12C11O100.4°0.2°
C8C12C11C13179.9°180.0°
C8C12C11C16176.4°180.0°
C8C12C13C1543.8°62.1°
C8C12C13C14116.3°130.7°
C12C8C5H317.1°0.0°
C8C12C13H9106.2°83.5°
O10C11C12C16176.8°179.8°
O10C11C12C13179.5°179.9°
O10C11C16N3135.6°174.4°
O10C11C16C28135.7°5.3°
C21C22C23CL2174.6°180.0°
C21C22C23H15176.0°180.0°
C22C21C20H17179.4°179.7°
C23C22C21H16177.8°180.0°
CL2C22C23H151.4°0.0°
CL2C22C21H163.1°0.0°
C11C12C13C15136.0°117.9°
C11C12C13C1463.5°49.2°
C12C11C16N31147.8°5.4°
C12C11C16C2840.8°175.0°
C11C12C13H974.0°96.5°
C13C12C11C163.7°0.1°
C12C13C15C14105.0°107.5°
C12C13C15H9150.1°144.9°
C12C13C14H9137.5°145.1°
C12C13C14H10132.5°145.0°
C12C13C14H118.4°0.0°
C12C13C15H124.3°0.0°
C12C13C15H13145.6°145.0°
C11C16N31C28172.4°179.7°
C11C16N31O30177.4°180.0°
C11C16C28C29176.4°179.8°
C11C16C28H183.6°0.0°
C15C13C14H9104.6°107.4°
C13C15C14H12109.3°107.5°
C13C15C14H13109.3°107.5°
C15C13C14H10109.5°107.5°
C15C13C14H11109.6°107.5°
C13C15H12H13145.0°145.7°
C13C14H10H11144.6°145.6°
N31C16C28C294.0°0.4°
C16N31O30C294.0°0.0°
N31C16C28H18176.0°179.7°
C28C16N31O304.9°0.3°
C16C28C29H18180.0°179.8°
C16C28C29O301.3°0.5°
C16C28C29C32175.4°179.9°
N31O30C29C281.6°0.3°
N31O30C29C32179.0°180.0°
C15C14H10H11144.6°145.7°
C14C15H12H13145.0°145.7°
C28C29O30C32177.5°179.6°
C28C29C32C33100.1°90.4°
C28C29C32H19139.0°149.6°
C28C29C32H2020.9°29.6°
O30C29C32C3383.4°90.0°
O30C29C28H18178.7°179.7°
O30C29C32H1937.6°29.9°
O30C29C32H20155.6°150.0°
C34C33C32C2949.7°60.0°
C34C33C35C32121.8°120.0°
C34C33C35C36119.8°120.0°
C34C33C32C36118.2°120.0°
C34C33C32H19170.6°180.0°
C34C33C32H2071.4°60.1°
C34C33C36H21180.0°180.0°
C34C33C36H2260.0°60.0°
C34C33C36H2360.0°59.9°
C34C33C35H24180.0°60.0°
C34C33C35H2560.0°60.0°
C34C33C35H2660.0°180.0°
C33C34H27H28120.0°120.0°
C33C34H27H29120.0°120.0°
C33C34H28H29120.0°120.0°
C29C32C33C3573.9°180.0°
C29C32C33H19121.0°120.0°
C29C32C33H20121.0°120.1°
C29C32C33C36167.8°60.0°
C32C29C28H184.6°0.1°
C29C32H19H20116.9°120.1°
C35C33C32C36118.3°120.0°
C35C33C32H1947.1°60.0°
C35C33C32H20165.1°59.9°
C35C33C36H2158.3°59.9°
C35C33C36H22178.3°60.0°
C35C33C36H2361.7°180.0°
C33C35H24H25120.0°120.0°
C33C35H24H26120.0°120.0°
C33C35H25H26120.0°120.0°
C35C33C34H27180.0°180.0°
C35C33C34H2860.0°60.0°
C35C33C34H2960.0°60.0°
C33C32H19H20116.9°119.9°
C32C33C36H2161.8°60.1°
C32C33C36H2258.3°180.0°
C32C33C36H23178.3°60.0°
C32C33C35H2458.2°60.0°
C32C33C35H25178.2°180.0°
C32C33C35H2661.8°60.0°
C32C33C34H2757.1°60.0°
C32C33C34H2862.9°180.0°
C32C33C34H29177.2°60.0°
C36C33C32H1971.2°60.0°
C36C33C32H2046.8°180.0°
C33C36H21H22120.0°120.0°
C33C36H21H23120.0°120.1°
C33C36H22H23120.0°120.0°
C36C33C35H2460.2°180.0°
C36C33C35H2559.8°60.0°
C36C33C35H26179.8°60.0°
C36C33C34H2760.6°60.0°
C36C33C34H28179.4°60.0°
C36C33C34H2959.4°180.0°
H1C4C5H354.9°174.1°
H2C4C5H3173.0°66.0°
H3C5C6H463.3°174.6°
H3C5C6H5178.4°65.4°
H4C6C7H7177.9°175.3°
H4C6C7H858.3°55.3°
H5C6C7H763.8°64.7°
H5C6C7H8176.5°175.3°
H9C13C14H105.0°0.0°
H9C13C14H11145.9°145.0°
H9C13C15H12145.8°145.0°
H9C13C15H134.5°0.1°
H10C14C15H12141.2°145.0°
H10C14C15H130.2°0.0°
H11C14C15H120.2°0.0°
H11C14C15H13141.1°145.0°
H16C21C20H170.6°0.0°
H21C36H22H23120.0°120.0°
H24C35H25H26120.0°120.1°
H27C34H28H29120.0°119.9°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon