Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

AYJ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2S1doub1.42Å1.44Å
S1O1doub1.42Å1.43Å
S1N1sing1.66Å1.66Å
S1C1sing1.81Å1.75Å
C2C3sing1.51Å1.51Å
C2N1sing1.46Å1.47Å
N2C3sing1.35Å1.33Å
C3O3doub1.21Å1.23Å
N1C4sing1.47Å1.49Å
C4C5sing1.53Å1.52Å
C4C9sing1.53Å1.52Å
C5C6sing1.53Å1.53Å
C9C8sing1.53Å1.53Å
C6C7sing1.53Å1.52Å
C8C7sing1.53Å1.52Å
C4H1sing1.09Å1.10Å
C5H2sing1.09Å1.10Å
C5H3sing1.09Å1.10Å
C6H4sing1.09Å1.10Å
C6H5sing1.09Å1.10Å
C7H6sing1.09Å1.10Å
C7H7sing1.09Å1.10Å
C8H8sing1.09Å1.10Å
C8H9sing1.09Å1.10Å
C1H10sing1.09Å1.10Å
C1H11sing1.09Å1.10Å
C1H12sing1.09Å1.10Å
C2H13sing1.09Å1.10Å
C2H14sing1.09Å1.10Å
N2H15sing0.97Å1.00Å
N2H16sing0.97Å1.00Å
C9H17sing1.09Å1.10Å
C9H18sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2S1O1118.5°121.0°
O2S1N1108.2°104.3°
O2S1C1107.5°110.5°
O1S1N1107.7°104.2°
O1S1C1107.9°110.5°
N1S1C1106.3°104.5°
S1N1C2116.4°120.1°
S1N1C4129.2°120.0°
S1C1H10109.5°109.5°
S1C1H11109.4°109.5°
S1C1H12109.5°109.5°
C3C2N1111.0°109.5°
C2C3N2116.9°120.0°
C2C3O3119.1°120.0°
C3C2H13109.1°109.5°
C3C2H14109.1°109.5°
C2N1C4112.4°120.0°
N1C2H13109.1°109.5°
N1C2H14109.1°109.5°
N2C3O3124.0°120.1°
C3N2H15120.0°120.1°
C3N2H16120.0°120.0°
N1C4C5117.3°109.5°
N1C4C9111.9°109.5°
N1C4H1106.0°109.5°
C5C4C9109.4°109.5°
C4C5C6110.5°109.5°
C5C4H1105.6°109.5°
C4C5H2109.2°109.5°
C4C5H3109.2°109.5°
C4C9C8110.5°109.5°
C9C4H1105.7°109.5°
C4C9H17109.2°109.5°
C4C9H18109.2°109.4°
C5C6C7111.8°109.4°
C6C5H2109.2°109.5°
C6C5H3109.2°109.5°
C5C6H4108.9°109.5°
C5C6H5108.9°109.4°
C9C8C7111.3°109.4°
C9C8H8109.0°109.5°
C9C8H9109.0°109.5°
C8C9H17109.2°109.5°
C8C9H18109.2°109.5°
C6C7C8111.4°109.5°
C7C6H4108.9°109.5°
C7C6H5108.9°109.5°
C6C7H6109.0°109.4°
C6C7H7109.0°109.5°
C8C7H6109.0°109.5°
C8C7H7109.0°109.5°
C7C8H8109.0°109.4°
C7C8H9109.0°109.5°
H2C5H3109.5°109.5°
H4C6H5109.5°109.5°
H6C7H7109.4°109.4°
H8C8H9109.5°109.5°
H10C1H11109.5°109.5°
H10C1H12109.5°109.5°
H11C1H12109.5°109.4°
H13C2H14109.5°109.4°
H15N2H16120.0°119.9°
H17C9H18109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2S1O1N1123.2°116.8°
O2S1O1C1122.4°131.5°
O2S1N1C1115.3°116.1°
O2S1N1C29.1°158.1°
O2S1N1C4153.4°22.2°
O2S1C1H10180.0°76.7°
O2S1C1H1160.0°43.3°
O2S1C1H1260.0°163.2°
O1S1N1C1115.5°116.0°
O1S1N1C2138.3°30.3°
O1S1N1C424.1°150.1°
O1S1C1H1051.1°60.0°
O1S1C1H1168.9°180.0°
O1S1C1H12171.1°60.0°
S1N1C2C394.5°95.3°
S1N1C2C4165.4°179.7°
S1N1C4C58.7°120.0°
S1N1C4C9119.1°120.0°
S1N1C4H1126.2°0.0°
N1S1C1H1064.3°171.6°
N1S1C1H11175.8°68.4°
N1S1C1H1255.7°51.6°
S1N1C2H13145.3°24.7°
S1N1C2H1425.7°144.6°
C1S1N1C2106.2°85.8°
C1S1N1C491.3°93.9°
S1C1H10H11120.0°120.0°
S1C1H10H12120.0°120.0°
S1C1H11H12120.0°120.0°
C3C2N1H13120.2°120.0°
C3C2N1H14120.2°120.0°
C2C3N2O3179.1°179.9°
C3C2N1C4100.1°85.0°
C3C2H13H14119.3°120.0°
C2C3N2H15179.2°0.1°
C2C3N2H160.9°180.0°
N1C2C3N2160.8°179.9°
N1C2C3O318.3°0.0°
C2N1C4C5154.4°60.3°
C2N1C4C977.9°59.7°
C2N1C4H136.8°179.7°
N1C2H13H14119.3°120.0°
N2C3C2H1340.6°60.0°
N2C3C2H1478.9°60.0°
C3N2H15H16180.0°180.0°
O3C3C2H13138.6°120.0°
O3C3C2H14101.9°120.1°
O3C3N2H150.0°180.0°
O3C3N2H16180.0°0.0°
N1C4C5C9128.9°120.0°
N1C4C5H1117.8°120.0°
N1C4C9H1114.9°120.0°
N1C4C5C6172.7°180.0°
N1C4C9C8169.0°180.0°
N1C4C5H252.5°60.0°
N1C4C5H367.2°60.0°
C4N1C2H1320.1°155.0°
C4N1C2H14139.7°35.0°
N1C4C9H1770.8°60.0°
N1C4C9H1848.8°60.0°
C5C4C9H1113.3°120.0°
C4C5C6H2120.1°120.0°
C4C5C6H3120.2°120.0°
C5C4C9C859.2°60.0°
C4C5C6C756.1°60.0°
C4C5H2H3119.5°120.0°
C4C5C6H464.2°60.0°
C4C5C6H5176.4°180.0°
C5C4C9H1761.0°60.0°
C5C4C9H18179.3°180.0°
C9C4C5C658.4°60.0°
C4C9C8H17120.2°120.0°
C4C9C8H18120.1°120.0°
C4C9C8C757.2°60.0°
C9C4C5H2178.6°180.0°
C9C4C5H361.7°60.0°
C4C9C8H8177.5°59.9°
C4C9C8H963.1°180.0°
C4C9H17H18119.5°119.9°
C5C6C7H4120.3°120.0°
C5C6C7H5120.3°120.0°
C5C6C7C853.6°60.0°
C6C5C4H154.9°60.0°
C6C5H2H3119.5°120.0°
C5C6H4H5118.9°120.0°
C5C6C7H6173.8°180.0°
C5C6C7H766.7°60.0°
C9C8C7C654.0°60.0°
C9C8C7H8120.3°119.9°
C9C8C7H9120.3°120.0°
C8C9C4H154.1°60.0°
C9C8C7H6174.3°180.0°
C9C8C7H766.3°60.0°
C9C8H8H9119.2°120.0°
C8C9H17H18119.5°120.0°
C6C7C8H6120.3°120.0°
C6C7C8H7120.3°120.1°
C7C6C5H2176.2°180.0°
C7C6C5H364.1°60.0°
C7C6H4H5118.9°120.1°
C6C7H6H7119.1°120.0°
C6C7C8H8174.3°59.9°
C6C7C8H966.3°180.0°
C8C7C6H466.8°59.9°
C8C7C6H5173.9°180.0°
C8C7H6H7119.1°120.0°
C7C8H8H9119.2°120.0°
C7C8C9H1763.0°60.0°
C7C8C9H18177.4°180.0°
H1C4C5H265.3°60.0°
H1C4C5H3175.1°180.0°
H1C4C9H17174.3°180.0°
H1C4C9H1866.0°60.0°
H2C5C6H455.9°60.0°
H2C5C6H563.4°60.0°
H3C5C6H4175.6°180.0°
H3C5C6H556.2°60.0°
H4C6C7H653.5°60.1°
H4C6C7H7172.9°NaN°
H5C6C7H665.8°60.0°
H5C6C7H753.6°59.9°
H6C7C8H865.4°60.1°
H6C7C8H954.0°60.0°
H7C7C8H854.0°180.0°
H7C7C8H9173.4°60.0°
H8C8C9H1757.3°180.0°
H8C8C9H1862.4°60.0°
H9C8C9H17176.8°60.0°
H9C8C9H1857.1°60.0°
H10C1H11H12120.0°120.0°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon