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AXR

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C5O5sing1.43Å1.44Å
O5HO5sing0.97Å0.95Å
C4C5sing1.53Å1.53Å
C5H51sing1.09Å1.10Å
C5H52sing1.09Å1.10Å
C4C3sing1.54Å1.53Å
C4O4sing1.44Å1.43Å
C4H4sing1.09Å1.10Å
O4C1sing1.44Å1.43Å
O3C3sing1.43Å1.43Å
C3C2sing1.55Å1.53Å
C3H3sing1.09Å1.10Å
O3HO3sing0.97Å0.95Å
C2O2sing1.43Å1.43Å
C2C1sing1.55Å1.53Å
C2H2sing1.09Å1.10Å
O2HO2sing0.97Å0.95Å
O1C1sing1.43Å1.43Å
C1H1sing1.09Å1.10Å
O1C6sing1.43Å1.43Å
C6H6sing1.09Å1.10Å
C6H6Asing1.09Å1.10Å
C6H6Bsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C5O5HO5109.5°114.0°
O5C5C4104.6°109.5°
O5C5H51111.2°109.4°
O5C5H52112.2°109.5°
C4C5H51111.2°109.5°
C4C5H52112.2°109.5°
C5C4C3106.3°109.9°
C5C4O4105.5°109.9°
C5C4H4111.4°109.8°
H51C5H52105.7°109.5°
C3C4O4100.8°107.3°
C3C4H4115.5°109.8°
C4C3O3106.3°110.5°
C4C3C297.2°104.2°
C4C3H3117.5°110.5°
O4C4H4116.2°110.0°
C4O4C1108.4°107.0°
O4C1C2104.9°103.5°
O4C1O1110.0°110.6°
O4C1H1110.7°110.6°
O3C3C2105.4°110.5°
O3C3H3110.6°110.5°
C3O3HO3109.5°114.0°
C2C3H3118.2°110.4°
C3C2O2108.0°110.9°
C3C2C1101.3°102.1°
C3C2H2114.4°110.9°
O2C2C1106.3°110.9°
O2C2H2110.0°110.8°
C2O2HO2109.5°114.0°
C1C2H2116.0°110.9°
C2C1O1105.1°110.6°
C2C1H1115.2°110.6°
O1C1H1110.5°110.7°
C1O1C6109.6°114.0°
O1C6H6109.5°109.4°
O1C6H6A109.4°109.5°
O1C6H6B109.5°109.5°
H6C6H6A109.5°109.5°
H6C6H6B109.4°109.5°
H6AC6H6B109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O5C5C4H51120.0°119.9°
O5C5C4H52121.8°120.1°
O5C5H51H52122.0°120.0°
O5C5C4C3169.7°175.0°
O5C5C4O463.3°67.1°
O5C5C4H463.6°54.1°
HO5O5C5C4102.2°180.0°
HO5O5C5H5117.8°60.1°
HO5O5C5H52135.9°59.9°
C4C5H51H52122.0°120.0°
C5C4C3O4109.8°119.5°
C5C4C3H4124.2°120.9°
C5C4O4H4124.0°121.1°
C5C4O4C1148.4°92.9°
C5C4C3O391.1°123.9°
C5C4C3C2160.5°117.4°
C5C4C3H333.4°1.2°
H51C5C4C349.7°65.0°
H51C5C4O456.7°52.8°
H51C5C4H4176.3°174.0°
H52C5C4C368.4°55.0°
H52C5C4O4174.9°172.8°
H52C5C4H458.2°66.0°
C3C4O4H4125.6°119.5°
C3C4O4C137.9°26.5°
C4C3O3C2102.5°114.8°
C4C3O3H3128.6°122.7°
C4C3C2H3126.6°118.7°
C4C3O3HO362.7°180.0°
C4C3C2O2156.3°139.1°
C4C3C2C144.8°20.9°
C4C3C2H280.7°97.3°
O4C4C3O3159.1°116.6°
O4C4C3C250.7°2.0°
O4C4C3H376.4°120.7°
C4O4C1C28.7°40.0°
C4O4C1O1103.9°158.6°
C4O4C1H1133.6°78.4°
H4C4O4C187.7°146.0°
H4C4C3O333.1°3.0°
H4C4C3C275.4°121.7°
H4C4C3H3157.5°119.7°
O4C1C2C324.0°37.0°
O4C1C2O2136.8°155.2°
O4C1C2O1116.1°118.5°
O4C1C2H1122.0°118.4°
O4C1C2H2100.5°81.2°
O4C1O1H1122.6°122.9°
O4C1O1C677.3°71.4°
O3C3C2H3124.2°122.6°
O3C3C2O294.5°102.2°
O3C3C2C1154.0°139.6°
O3C3C2H228.5°21.4°
C2C3O3HO339.9°65.2°
C3C2O2C1108.1°112.7°
C3C2O2H2125.6°123.7°
C3C2C1H2124.5°118.2°
C3C2O2HO2102.7°180.0°
C3C2C1O1140.1°155.5°
C3C2C1H198.0°81.4°
H3C3O3HO3168.7°57.3°
H3C3C2O229.7°20.4°
H3C3C2C181.8°97.8°
H3C3C2H2152.7°144.0°
O2C2C1H2122.7°123.6°
O2C2C1O1107.1°86.3°
O2C2C1H114.8°36.8°
C1C2O2HO2149.2°67.3°
C2C1O1H1124.9°123.0°
C2C1O1C6170.2°174.5°
H2C2O2HO222.9°56.4°
H2C2C1O115.5°37.3°
H2C2C1H1137.5°160.4°
C1O1C6H612.0°180.0°
C1O1C6H6A132.0°60.0°
C1O1C6H6B108.0°60.1°
H1C1O1C645.3°51.5°
O1C6H6H6A120.0°120.0°
O1C6H6H6B120.0°120.0°
O1C6H6AH6B120.0°120.1°
H6C6H6AH6B120.0°120.0°

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PDB entries from 2024-08-14

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