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SummaryGeometryRelated PDB entries

AXB

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
N1CAZsing1.37Å1.33Å
CAZCBFsing1.47Å1.53Å
CAZCBDdoub1.40Å1.39Å
CBFOADdoub1.22Å1.23Å
CBFCBGsing1.48Å1.53Å
CBGOAEdoub1.22Å1.23Å
CBGCBDsing1.47Å1.53Å
CBDN2sing1.37Å1.33Å
N2CAMsing1.47Å1.47Å
N2CAPsing1.47Å1.47Å
CAMCAKsing1.53Å1.53Å
CAKCAXsing1.51Å1.53Å
CAPCAYsing1.51Å1.53Å
CAYCAJdoub1.39Å1.39ÅAromatic
CAYCAXsing1.37Å1.39ÅAromatic
CAJCAWsing1.38Å1.39ÅAromatic
CAXCAIdoub1.39Å1.39ÅAromatic
CAICAHsing1.38Å1.39ÅAromatic
CAHCAWdoub1.37Å1.39ÅAromatic
CAWCAOsing1.51Å1.53Å
CAON3sing1.46Å1.47Å
N3CAVsing1.35Å1.33Å
CAVOABdoub1.22Å1.23Å
CAVCBBsing1.48Å1.53Å
CBBN4doub1.30Å1.34Å
CBBN5sing1.37Å1.40Å
N4CBHsing1.34Å1.34Å
CBHSAUsing1.76Å1.71ÅAromatic
CBHCBIdoub1.39Å1.39ÅAromatic
SAUCBAsing1.76Å1.71ÅAromatic
CBACAQsing1.52Å1.53Å
CBACBCdoub1.33Å1.40ÅAromatic
CAQSBKsing1.81Å1.83Å
SBKOAFdoub1.42Å1.50Å
SBKOAGdoub1.42Å1.50Å
SBKCANsing1.82Å1.83Å
CANCALsing1.52Å1.53Å
CALCBCsing1.52Å1.53Å
CBCCBIsing1.42Å1.40ÅAromatic
CBICBEsing1.48Å1.39Å
CBEOACdoub1.22Å1.23Å
CBEN5sing1.35Å1.40Å
N1HN1sing0.97Å1.00Å
N1HN1Asing0.97Å1.00Å
CAMHAMsing1.09Å1.10Å
CAMHAMAsing1.09Å1.10Å
CAKHAKsing1.09Å1.10Å
CAKHAKAsing1.09Å1.10Å
CAPHAPsing1.09Å1.10Å
CAPHAPAsing1.09Å1.10Å
CAJHAJsing1.08Å1.08Å
CAIHAIsing1.08Å1.08Å
CAHHAHsing1.08Å1.08Å
CAOHAOsing1.09Å1.10Å
CAOHAOAsing1.09Å1.10Å
N3HN3sing0.97Å1.00Å
CAQHAQsing1.09Å1.10Å
CAQHAQAsing1.09Å1.10Å
CANHANsing1.09Å1.10Å
CANHANAsing1.09Å1.10Å
CALHALsing1.09Å1.10Å
CALHALAsing1.09Å1.10Å
N5HN5sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
N1CAZCBF133.7°135.0°
N1CAZCBD133.9°135.0°
CAZN1HN1109.5°120.0°
CAZN1HN1A109.4°120.0°
CBFCAZCBD92.4°90.0°
CAZCBFOAD135.7°135.0°
CAZCBFCBG87.6°90.0°
CAZCBDCBG92.5°93.2°
CAZCBDN2133.5°133.4°
OADCBFCBG136.6°135.0°
CBFCBGOAE136.4°136.6°
CBFCBGCBD87.3°86.9°
OAECBGCBD136.3°136.6°
CBGCBDN2134.0°133.4°
CBDN2CAM117.4°121.4°
CBDN2CAP117.2°121.4°
CAMN2CAP121.8°117.3°
N2CAMCAK111.3°107.9°
N2CAMHAM108.9°109.8°
N2CAMHAMA108.4°109.8°
N2CAPCAY111.6°109.7°
N2CAPHAP108.8°109.4°
N2CAPHAPA108.3°109.5°
CAMCAKCAX109.4°110.8°
CAKCAMHAM108.9°109.8°
CAKCAMHAMA108.5°109.8°
CAMCAKHAK109.5°109.2°
CAMCAKHAKA109.5°109.2°
CAKCAXCAY121.1°122.9°
CAKCAXCAI119.1°117.6°
CAXCAKHAK109.5°109.2°
CAXCAKHAKA109.5°109.2°
CAPCAYCAJ117.1°117.8°
CAPCAYCAX123.2°122.5°
CAYCAPHAP108.8°109.4°
CAYCAPHAPA108.3°109.5°
CAJCAYCAX119.6°119.7°
CAYCAJCAW120.7°120.5°
CAYCAJHAJ119.7°119.7°
CAYCAXCAI119.8°119.5°
CAJCAWCAH119.8°119.9°
CAJCAWCAO118.4°120.1°
CAWCAJHAJ119.7°119.8°
CAXCAICAH120.5°120.6°
CAXCAIHAI119.7°119.7°
CAICAHCAW119.7°119.8°
CAHCAIHAI119.8°119.7°
CAICAHHAH120.2°120.1°
CAHCAWCAO121.8°120.0°
CAWCAHHAH120.2°120.1°
CAWCAON3110.9°109.5°
CAWCAOHAO109.0°109.5°
CAWCAOHAOA108.6°109.5°
CAON3CAV122.7°120.0°
N3CAOHAO109.0°109.5°
N3CAOHAOA108.7°109.5°
CAON3HN3118.6°120.0°
N3CAVOAB124.9°120.0°
N3CAVCBB113.5°120.0°
CAVN3HN3118.6°120.0°
OABCAVCBB121.6°120.0°
CAVCBBN4118.6°118.8°
CAVCBBN5121.5°118.9°
N4CBBN5120.0°122.3°
CBBN4CBH121.1°122.2°
CBBN5CBE119.1°120.2°
CBBN5HN5120.5°119.9°
N4CBHSAU130.4°131.1°
N4CBHCBI122.6°119.9°
SAUCBHCBI107.0°109.0°
CBHSAUCBA97.1°91.8°
CBHCBICBC114.4°114.1°
CBHCBICBE116.9°117.6°
SAUCBACAQ125.9°121.8°
SAUCBACBC106.5°111.0°
CAQCBACBC127.6°127.2°
CBACAQSBK110.4°109.1°
CBACAQHAQ109.2°109.6°
CBACAQHAQA108.9°109.5°
CBACBCCAL125.5°127.1°
CBACBCCBI115.0°114.0°
CAQSBKOAF109.9°108.8°
CAQSBKOAG109.9°108.9°
CAQSBKCAN105.1°100.3°
SBKCAQHAQ109.1°109.5°
SBKCAQHAQA109.0°109.5°
OAFSBKOAG110.3°119.5°
OAFSBKCAN111.1°108.8°
OAGSBKCAN110.5°108.9°
SBKCANCAL109.8°108.4°
SBKCANHAN109.4°109.6°
SBKCANHANA109.3°109.6°
CANCALCBC114.1°111.6°
CALCANHAN109.4°109.7°
CALCANHANA109.3°109.7°
CANCALHAL108.0°109.0°
CANCALHALA106.9°109.0°
CALCBCCBI119.4°118.9°
CBCCALHAL108.0°109.1°
CBCCALHALA106.9°109.0°
CBCCBICBE128.7°128.4°
CBICBEOAC120.8°121.0°
CBICBEN5120.3°117.9°
OACCBEN5118.9°121.1°
CBEN5HN5120.5°119.9°
HN1N1HN1A109.5°120.1°
HAMCAMHAMA110.9°109.8°
HAKCAKHAKA109.5°109.2°
HAPCAPHAPA111.1°109.4°
HAOCAOHAOA110.7°109.5°
HAQCAQHAQA110.2°109.6°
HANCANHANA109.7°109.8°
HALCALHALA113.1°109.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
N1CAZCBFCBD179.6°179.7°
N1CAZCBFOAD7.2°0.1°
N1CAZCBFCBG176.8°180.0°
N1CAZCBDCBG176.8°180.0°
N1CAZCBDN24.3°0.0°
CAZN1HN1HN1A120.0°179.8°
CAZCBFOADCBG174.2°179.9°
CAZCBFCBGOAE177.8°180.0°
CBFCAZCBDCBG3.6°0.3°
CBFCAZCBDN2175.3°179.7°
CBFCAZN1HN155.4°0.0°
CBFCAZN1HN1A64.6°179.8°
CBDCAZCBFOAD172.4°179.8°
CAZCBDCBGOAE177.4°180.0°
CAZCBDCBGN2178.9°180.0°
CAZCBDN2CAM144.3°180.0°
CAZCBDN2CAP14.8°0.3°
CBDCAZN1HN1125.2°179.6°
CBDCAZN1HN1A114.8°0.6°
OADCBFCBGOAE6.3°0.1°
OADCBFCBGCBD172.6°179.8°
CBFCBGOAECBD178.4°179.5°
CBFCBGCBDN2175.3°179.7°
OAECBGCBDN23.6°0.0°
CBGCBDN2CAM34.3°0.0°
CBGCBDN2CAP166.7°179.7°
CBDN2CAMCAP158.0°179.7°
CBDN2CAMCAK153.1°115.6°
CBDN2CAPCAY176.3°135.6°
CBDN2CAMHAM86.9°124.8°
CBDN2CAMHAMA33.8°3.9°
CBDN2CAPHAP63.7°15.6°
CBDN2CAPHAPA57.2°104.3°
N2CAMCAKHAM120.0°119.6°
N2CAMCAKHAMA119.2°119.6°
N2CAMCAKCAX50.9°47.4°
CAMN2CAPCAY18.3°44.1°
N2CAMHAMHAMA119.2°120.8°
N2CAMCAKHAK171.0°167.8°
N2CAMCAKHAKA69.0°72.9°
CAMN2CAPHAP138.3°164.2°
CAMN2CAPHAPA100.8°76.0°
CAPN2CAMCAK48.9°64.1°
N2CAPCAYHAP120.0°120.0°
N2CAPCAYHAPA119.1°120.1°
N2CAPCAYCAJ173.0°169.0°
N2CAPCAYCAX7.6°11.1°
CAPN2CAMHAM71.1°55.5°
CAPN2CAMHAMA168.2°176.3°
N2CAPHAPHAPA119.1°119.9°
CAMCAKCAXHAK120.0°120.3°
CAMCAKCAXHAKA120.0°120.4°
CAMCAKCAXCAY29.3°19.9°
CAMCAKCAXCAI151.0°160.5°
CAKCAMHAMHAMA119.3°120.7°
CAMCAKHAKHAKA120.0°119.3°
CAKCAXCAYCAP0.4°0.9°
CAKCAXCAYCAJ179.8°179.1°
CAKCAXCAYCAI179.7°179.6°
CAKCAXCAICAH179.8°179.5°
CAXCAKCAMHAM69.1°72.2°
CAXCAKCAMHAMA170.2°167.0°
CAXCAKHAKHAKA120.0°119.4°
CAKCAXCAIHAI0.2°0.5°
CAPCAYCAJCAX179.4°179.9°
CAPCAYCAJCAW179.3°179.5°
CAPCAYCAXCAI179.3°179.4°
CAYCAPHAPHAPA119.1°119.9°
CAPCAYCAJHAJ0.7°0.4°
CAYCAJCAWHAJ180.0°179.9°
CAJCAYCAXCAI0.1°0.5°
CAYCAJCAWCAH0.1°0.0°
CAYCAJCAWCAO179.6°179.9°
CAJCAYCAPHAP67.0°49.0°
CAJCAYCAPHAPA53.9°70.9°
CAXCAYCAJCAW0.1°0.4°
CAYCAXCAICAH0.1°0.1°
CAYCAXCAKHAK149.3°140.2°
CAYCAXCAKHAKA90.7°100.5°
CAXCAYCAPHAP112.4°131.1°
CAXCAYCAPHAPA126.7°109.0°
CAXCAYCAJHAJ179.9°179.6°
CAYCAXCAIHAI179.9°179.9°
CAJCAWCAHCAI0.1°0.4°
CAJCAWCAHCAO179.7°180.0°
CAJCAWCAON3172.4°90.1°
CAJCAWCAHHAH179.9°179.9°
CAJCAWCAOHAO52.5°150.0°
CAJCAWCAOHAOA68.2°29.9°
CAXCAICAHHAI180.0°180.0°
CAXCAICAHCAW0.1°0.4°
CAICAXCAKHAK31.0°40.1°
CAICAXCAKHAKA89.0°79.2°
CAXCAICAHHAH179.9°179.9°
CAICAHCAWHAH180.0°179.7°
CAICAHCAWCAO179.6°179.6°
CAHCAWCAON37.3°90.0°
CAHCAWCAJHAJ179.9°179.9°
CAWCAHCAIHAI179.9°179.7°
CAHCAWCAOHAO127.3°30.0°
CAHCAWCAOHAOA112.1°150.1°
CAWCAON3HAO120.0°120.0°
CAWCAON3HAOA119.4°120.0°
CAWCAON3CAV72.5°180.0°
CAOCAWCAJHAJ0.4°0.1°
CAOCAWCAHHAH0.4°0.2°
CAWCAOHAOHAOA119.4°120.0°
CAWCAON3HN3107.5°0.0°
CAON3CAVHN3180.0°180.0°
CAON3CAVOAB1.0°0.0°
CAON3CAVCBB179.6°180.0°
N3CAOHAOHAOA119.4°120.0°
N3CAVOABCBB179.4°179.9°
N3CAVCBBN45.7°0.0°
N3CAVCBBN5174.6°179.8°
CAVN3CAOHAO47.5°60.0°
CAVN3CAOHAOA168.1°60.0°
OABCAVCBBN4174.8°180.0°
OABCAVCBBN54.9°0.3°
OABCAVN3HN3179.0°179.9°
CAVCBBN4N5179.7°179.7°
CAVCBBN4CBH179.8°180.0°
CAVCBBN5CBE179.8°179.8°
CBBCAVN3HN30.5°0.0°
CAVCBBN5HN50.2°0.0°
CBBN4CBHSAU180.0°179.9°
CBBN4CBHCBI0.0°0.0°
N4CBBN5CBE0.2°0.4°
N4CBBN5HN5179.9°179.7°
N5CBBN4CBH0.1°0.2°
CBBN5CBECBI0.1°0.4°
CBBN5CBEOAC179.3°179.7°
CBBN5CBEHN5180.0°179.8°
N4CBHSAUCBI180.0°180.0°
N4CBHSAUCBA179.9°179.9°
N4CBHCBICBC179.8°179.9°
N4CBHCBICBE0.0°0.0°
CBHSAUCBACAQ179.0°179.6°
CBHSAUCBACBC0.3°0.3°
SAUCBHCBICBC0.2°0.1°
SAUCBHCBICBE180.0°179.9°
CBICBHSAUCBA0.1°0.1°
CBHCBICBCCBA0.4°0.3°
CBHCBICBCCAL176.1°179.6°
CBHCBICBCCBE179.9°180.0°
CBHCBICBEOAC179.3°179.9°
CBHCBICBEN50.0°0.2°
SAUCBACAQCBC179.2°179.8°
SAUCBACAQSBK166.6°161.8°
SAUCBACBCCAL175.9°179.6°
SAUCBACBCCBI0.5°0.4°
SAUCBACAQHAQ73.4°78.3°
SAUCBACAQHAQA47.0°42.0°
CBACAQSBKHAQ120.0°119.9°
CBACAQSBKHAQA119.6°119.9°
CBACAQSBKOAF156.9°160.0°
CBACAQSBKOAG81.6°68.3°
CBACAQSBKCAN37.2°45.9°
CAQCBACBCCAL4.8°0.6°
CAQCBACBCCBI178.8°179.5°
CBACAQHAQHAQA119.6°120.2°
CBCCBACAQSBK14.2°18.3°
CBACBCCALCAN25.3°19.9°
CBACBCCALCBI176.2°179.9°
CBACBCCBICBE179.7°179.7°
CBCCBACAQHAQ105.7°101.6°
CBCCBACAQHAQA133.9°138.2°
CBACBCCALHAL145.3°140.4°
CBACBCCALHALA92.7°100.7°
CAQSBKOAFOAG121.3°125.8°
CAQSBKOAFCAN115.8°108.4°
CAQSBKOAGCAN115.5°108.4°
CAQSBKCANCAL57.2°65.9°
SBKCAQHAQHAQA119.6°120.2°
CAQSBKCANHAN62.8°53.8°
CAQSBKCANHANA177.1°174.4°
OAFSBKOAGCAN123.2°125.8°
OAFSBKCANCAL176.0°180.0°
OAFSBKCAQHAQ36.9°40.1°
OAFSBKCAQHAQA83.5°80.2°
OAFSBKCANHAN56.0°60.3°
OAFSBKCANHANA64.1°60.3°
OAGSBKCANCAL61.3°48.3°
OAGSBKCAQHAQ158.4°171.8°
OAGSBKCAQHAQA38.0°51.6°
OAGSBKCANHAN178.7°168.0°
OAGSBKCANHANA58.6°71.5°
SBKCANCALHAN120.0°119.6°
SBKCANCALHANA119.9°119.7°
SBKCANCALCBC51.3°53.4°
CANSBKCAQHAQ82.8°74.0°
CANSBKCAQHAQA156.8°165.7°
SBKCANHANHANA119.9°120.5°
SBKCANCALHAL171.3°174.0°
SBKCANCALHALA66.6°67.1°
CANCALCBCHAL120.0°120.6°
CANCALCBCHALA118.0°120.5°
CANCALCBCCBI158.5°160.2°
CALCANHANHANA119.9°120.6°
CANCALHALHALA118.1°118.9°
CALCBCCBICBE3.7°0.3°
CBCCALCANHAN68.7°66.2°
CBCCALCANHANA171.2°173.1°
CBCCALHALHALA118.1°118.9°
CBCCBICBEOAC0.5°0.1°
CBCCBICBEN5179.9°179.7°
CBICBCCALHAL38.5°39.6°
CBICBCCALHALA83.5°79.3°
CBICBEOACN5179.4°179.8°
CBICBEN5HN5179.9°179.7°
OACCBEN5HN50.7°0.1°
HAMCAMCAKHAK51.0°48.2°
HAMCAMCAKHAKA171.0°167.4°
HAMACAMCAKHAK69.8°72.6°
HAMACAMCAKHAKA50.2°46.7°
HAICAICAHHAH0.1°0.0°
HAOCAON3HN3132.5°120.0°
HAOACAON3HN311.9°120.0°
HANCANCALHAL51.3°54.4°
HANCANCALHALA173.3°173.3°
HANACANCALHAL68.8°66.3°
HANACANCALHALA53.2°52.6°

247947

PDB entries from 2026-01-21

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