Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

AV6

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C6C1doub1.41Å1.47ÅAromatic
C1C2sing1.41Å1.46ÅAromatic
C1C10sing1.41Å1.47ÅAromatic
C3C2doub1.38Å1.37ÅAromatic
C2N13sing1.40Å1.31Å
C4C3sing1.39Å1.38ÅAromatic
C3H3sing1.08Å1.08Å
C5C4doub1.36Å1.39ÅAromatic
C4H4sing1.08Å1.08Å
C5C6sing1.41Å1.38ÅAromatic
C5H5sing1.08Å1.08Å
C7C6sing1.41Å1.38ÅAromatic
C7C8doub1.36Å1.38ÅAromatic
C7H7sing1.08Å1.08Å
C8C9sing1.39Å1.40ÅAromatic
C8H8sing1.08Å1.08Å
C9C10doub1.37Å1.37ÅAromatic
C9H9sing1.08Å1.08Å
C10N11sing1.40Å1.33Å
N11C12sing1.47Å1.46Å
N13C12sing1.47Å1.45Å
C12C15sing1.51Å1.46Å
C15C16doub1.38Å1.41ÅAromatic
C15C20sing1.38Å1.36ÅAromatic
C16C17sing1.39Å1.39ÅAromatic
C16H16sing1.08Å1.08Å
C17O22sing1.36Å1.36Å
C17C18doub1.39Å1.47ÅAromatic
C19C18sing1.39Å1.38ÅAromatic
C18O21sing1.36Å1.35Å
C20C19doub1.38Å1.37ÅAromatic
C19H19sing1.08Å1.08Å
C20H20sing1.08Å1.08Å
O21HO21sing0.97Å0.95Å
O22HO22sing0.97Å0.95Å
N11HN11sing0.97Å1.00Å
N13HN13sing0.97Å1.00Å
C12H12sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C6C1C2118.4°119.9°
C6C1C10120.7°119.9°
C1C6C5117.1°119.0°
C1C6C7119.9°119.1°
C2C1C10120.9°120.3°
C1C2C3120.8°119.4°
C1C2N13118.9°118.7°
C1C10C9115.9°119.4°
C1C10N11119.6°118.7°
C3C2N13120.3°121.9°
C2C3C4119.0°120.4°
C2C3H3120.5°119.8°
C2N13C12121.0°118.0°
C2N13HN13105.8°121.0°
C4C3H3120.5°119.8°
C3C4C5122.8°121.3°
C3C4H4118.6°119.4°
C5C4H4118.6°119.3°
C4C5C6121.9°120.0°
C4C5H5119.0°120.0°
C6C5H5119.1°120.0°
C5C6C7123.0°122.0°
C6C7C8116.8°119.9°
C6C7H7121.6°120.1°
C8C7H7121.6°120.0°
C7C8C9125.4°121.4°
C7C8H8117.3°119.3°
C9C8H8117.3°119.3°
C8C9C10121.3°120.4°
C8C9H9119.3°119.8°
C10C9H9119.4°119.8°
C9C10N11124.5°121.9°
C10N11C12119.1°118.0°
C10N11HN11106.4°121.0°
N11C12N13120.5°108.3°
N11C12C15124.6°109.7°
C12N11HN11106.4°121.0°
N11C12H1276.7°109.7°
N13C12C15111.9°109.7°
C12N13HN13105.8°121.0°
N13C12H12111.7°109.8°
C12C15C16119.0°119.9°
C12C15C20119.6°119.9°
C15C12H12100.6°109.6°
C16C15C20121.4°120.1°
C15C16C17120.5°120.0°
C15C16H16119.7°120.0°
C15C20C19120.2°120.1°
C15C20H20119.9°119.9°
C17C16H16119.7°120.0°
C16C17O22121.9°120.1°
C16C17C18116.9°119.8°
O22C17C18121.2°120.1°
C17O22HO22109.5°114.0°
C17C18C19119.9°119.9°
C17C18O21121.4°120.1°
C19C18O21118.6°120.1°
C18C19C20121.1°120.0°
C18C19H19119.4°120.0°
C18O21HO21109.5°114.0°
C20C19H19119.5°120.0°
C19C20H20119.9°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C6C1C2C10179.9°179.7°
C6C1C2C30.5°0.1°
C6C1C2N13179.5°180.0°
C1C6C5C41.6°0.4°
C1C6C5C7179.9°179.7°
C1C6C5H5178.4°179.8°
C1C6C7C80.7°0.5°
C1C6C7H7179.3°179.5°
C6C1C10C91.1°0.3°
C6C1C10N11179.7°180.0°
C1C2C3N13180.0°179.9°
C1C2C3C40.0°0.1°
C1C2C3H3179.9°179.9°
C2C1C6C51.2°0.3°
C2C1C6C7178.9°180.0°
C2C1C10C9178.8°179.4°
C2C1C10N110.4°0.3°
C1C2N13C120.1°25.1°
C1C2N13HN13119.8°155.0°
C10C1C2C3179.6°179.7°
C10C1C2N130.3°0.3°
C10C1C6C5178.9°180.0°
C10C1C6C71.0°0.3°
C1C10C9C81.0°0.7°
C1C10C9N11179.1°179.7°
C1C10C9H9179.0°179.8°
C1C10N11C121.6°25.0°
C1C10N11HN11121.6°155.0°
C2C3C4H3180.0°179.9°
C2C3C4C50.3°0.1°
C2C3C4H4179.6°179.9°
C3C2N13C12179.9°155.0°
C3C2N13HN1360.1°24.9°
N13C2C3C4180.0°179.8°
N13C2C3H30.0°0.1°
C2N13C12N111.3°45.9°
C2N13C12HN13120.0°179.9°
C2N13C12C15162.4°73.8°
C2N13C12H1285.6°165.7°
C3C4C5H4180.0°180.0°
C3C4C5C61.2°0.2°
C3C4C5H5178.8°180.0°
H3C3C4C5179.7°180.0°
H3C3C4H40.4°0.0°
C4C5C6H5180.0°179.8°
C4C5C6C7178.6°179.9°
H4C4C5C6178.8°179.8°
H4C4C5H51.2°0.0°
C5C6C7C8179.2°179.8°
C5C6C7H70.8°0.2°
H5C5C6C71.4°0.1°
C6C7C8H7180.0°180.0°
C6C7C8C90.6°0.1°
C6C7C8H8179.4°180.0°
C7C8C9H8180.0°179.9°
C7C8C9C100.8°0.5°
C7C8C9H9179.1°179.9°
H7C7C8C9179.4°179.9°
H7C7C8H80.6°0.1°
C8C9C10H9180.0°179.6°
C8C9C10N11179.8°179.6°
H8C8C9C10179.2°179.5°
H8C8C9H90.9°0.1°
C9C10N11C12177.5°154.7°
C9C10N11HN1157.5°25.3°
H9C9C10N110.2°0.1°
C10N11C12HN11120.0°180.0°
C10N11C12N132.1°45.9°
C10N11C12C15160.6°73.8°
C10N11C12H12105.5°165.7°
N11C12N13C15161.1°119.7°
N11C12N13H1287.0°119.8°
N11C12C15H1281.1°120.5°
N11C12C15C16156.2°150.0°
N11C12C15C2026.2°30.2°
N11C12N13HN13118.6°134.2°
N13C12C15H12118.8°120.6°
N13C12C15C164.0°31.2°
N13C12C15C20173.7°149.1°
N13C12N11HN11122.1°134.1°
C12C15C16C20177.6°179.8°
C12C15C16C17179.7°180.0°
C12C15C16H160.3°0.1°
C12C15C20C19179.6°179.7°
C12C15C20H200.4°0.0°
C15C12N11HN1179.4°106.1°
C15C12N13HN1342.4°106.1°
C15C16C17H16180.0°179.9°
C15C16C17O22178.9°180.0°
C15C16C17C180.6°0.0°
C16C15C20C192.8°0.5°
C16C15C20H20177.2°179.7°
C16C15C12H12122.7°89.5°
C20C15C16C172.1°0.2°
C20C15C16H16177.9°179.8°
C15C20C19C181.9°0.5°
C15C20C19H20180.0°179.8°
C15C20C19H19178.1°179.8°
C20C15C12H1254.9°90.3°
C16C17O22C18179.5°179.9°
C16C17C18C190.3°0.1°
C16C17C18O21179.3°180.0°
C16C17O22HO222.4°90.0°
H16C16C17O221.1°0.0°
H16C16C17C18179.4°179.9°
O22C17C18C19179.8°180.0°
O22C17C18O211.2°0.1°
C17C18C19O21179.1°179.9°
C17C18C19C200.4°0.2°
C17C18C19H19179.7°179.9°
C17C18O21HO21124.3°89.9°
C18C17O22HO22177.1°90.1°
C18C19C20H19180.0°179.7°
C18C19C20H20178.1°179.7°
C19C18O21HO2156.7°90.0°
O21C18C19C20178.7°179.7°
O21C18C19H191.3°0.0°
H19C19C20H201.9°0.0°
HN11N11C12H1214.5°14.3°
HN13N13C12H12154.4°14.4°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon