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Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
AS1OG2sing0.00Å1.75Å
AS1OG3sing0.00Å1.72Å
AS1OG1doub0.00Å1.65Å
AS1C3Bsing0.00Å1.92Å
OG2HO2sing0.00Å0.95Å
OG3HO3sing0.00Å0.95Å
PAO5'sing0.00Å1.59Å
PAO11sing0.00Å1.48Å
PAO13sing0.00Å1.59Å
PAO12doub0.00Å1.48Å
O5'C5'sing0.00Å1.40Å
O11HOBsing0.00Å0.95Å
O13PBsing0.00Å1.62Å
C5'C4'sing0.00Å1.52Å
C5'H5'1sing0.00Å1.10Å
C5'H5'2sing0.00Å1.10Å
C4'O4'sing0.00Å1.45Å
C4'C3'sing0.00Å1.52Å
C4'H4'sing0.00Å1.10Å
O4'C1'sing0.00Å1.43Å
C2'O2'sing0.00Å1.39Å
C2'C3'sing0.00Å1.53Å
C2'C1'sing0.00Å1.53Å
C2'H2'sing0.00Å1.10Å
O2'HO2'sing0.00Å0.95Å
C3'O3'sing0.00Å1.41Å
C3'H3'sing0.00Å1.10Å
O3'HO3'sing0.00Å0.95Å
C1'N9sing0.00Å1.48Å
C1'H1'sing0.00Å1.10Å
N9C4sing0.00Å1.37ÅAromatic
N9C8sing0.00Å1.34ÅAromatic
C4N3doub0.00Å1.31ÅAromatic
C4C5sing0.00Å1.35ÅAromatic
N3C2sing0.00Å1.33ÅAromatic
C2N1doub0.00Å1.32ÅAromatic
C2H2sing0.00Å1.08Å
N1C6sing0.00Å1.32ÅAromatic
C6N6sing0.00Å1.33Å
C6C5doub0.00Å1.40ÅAromatic
N6HN61sing0.00Å1.00Å
N6HN62sing0.00Å1.00Å
C5N7sing0.00Å1.36ÅAromatic
N7C8doub0.00Å1.29ÅAromatic
C8H8sing0.00Å1.08Å
PBOB2doub0.00Å1.56Å
PBC3Bsing0.00Å1.73Å
PBOB1sing0.00Å1.56Å
C3BH3B1sing0.00Å1.10Å
C3BH3B2sing0.00Å1.10Å
OB1HB1sing0.00Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OG2AS1OG3115.3°90.0°
OG2AS1OG1112.2°90.0°
OG2AS1C3B108.4°90.0°
AS1OG2HO2109.5°90.0°
OG3AS1OG1110.7°90.0°
OG3AS1C3B100.9°90.0°
AS1OG3HO3109.5°90.0°
OG1AS1C3B108.6°90.0°
AS1C3BPB111.9°90.0°
AS1C3BH3B1108.1°90.0°
AS1C3BH3B2108.7°90.0°
O5'PAO11109.6°90.0°
O5'PAO13110.4°90.0°
O5'PAO12108.4°90.0°
PAO5'C5'119.8°90.0°
O11PAO13110.5°90.0°
O11PAO12109.0°90.0°
PAO11HOB109.5°90.0°
O13PAO12108.8°90.0°
PAO13PB125.0°90.0°
O5'C5'C4'111.4°90.0°
O5'C5'H5'1108.4°90.0°
O5'C5'H5'2108.8°90.0°
O13PBOB2110.4°90.0°
O13PBC3B108.2°90.0°
O13PBOB1112.9°90.0°
C4'C5'H5'1108.4°90.0°
C4'C5'H5'2108.8°90.0°
C5'C4'O4'110.4°90.0°
C5'C4'C3'115.9°90.0°
C5'C4'H4'103.2°90.0°
H5'1C5'H5'2111.0°90.0°
O4'C4'C3'105.7°90.0°
O4'C4'H4'113.8°90.0°
C4'O4'C1'111.2°90.0°
C3'C4'H4'108.2°90.0°
C4'C3'C2'104.5°90.0°
C4'C3'O3'112.1°90.0°
C4'C3'H3'111.9°90.0°
O4'C1'C2'104.6°90.0°
O4'C1'N9105.9°90.0°
O4'C1'H1'118.9°90.0°
O2'C2'C3'108.1°90.0°
O2'C2'C1'111.8°90.0°
O2'C2'H2'106.8°90.0°
C2'O2'HO2'109.5°90.0°
C3'C2'C1'102.3°90.0°
C3'C2'H2'115.6°90.0°
C2'C3'O3'111.8°90.0°
C2'C3'H3'112.2°90.0°
C1'C2'H2'112.2°90.0°
C2'C1'N9119.6°90.0°
C2'C1'H1'105.0°90.0°
O3'C3'H3'104.6°90.0°
C3'O3'HO3'109.5°90.0°
N9C1'H1'103.6°90.0°
C1'N9C4132.8°90.0°
C1'N9C8120.7°90.0°
C4N9C8104.5°90.0°
N9C4N3128.9°90.0°
N9C4C5106.0°90.0°
N9C8N7114.3°90.0°
N9C8H8122.8°90.0°
N3C4C5124.9°90.0°
C4N3C2111.8°90.0°
C4C5C6118.2°90.0°
C4C5N7110.7°90.0°
N3C2N1130.2°90.0°
N3C2H2114.9°90.0°
N1C2H2114.9°90.0°
C2N1C6116.2°90.0°
N1C6N6117.9°90.0°
N1C6C5118.7°90.0°
N6C6C5123.5°90.0°
C6N6HN61109.5°90.0°
C6N6HN62109.5°90.0°
C6C5N7131.1°90.0°
HN61N6HN62109.5°90.0°
C5N7C8103.9°90.0°
N7C8H8122.8°90.0°
OB2PBC3B104.7°90.0°
OB2PBOB1109.7°90.0°
C3BPBOB1110.7°90.0°
PBC3BH3B1108.1°90.0°
PBC3BH3B2108.6°90.0°
PBOB1HB1109.5°90.0°
H3B1C3BH3B2111.4°90.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OG2AS1OG3OG1128.7°90.0°
OG2AS1OG3C3B116.5°90.0°
OG2AS1OG1C3B119.8°90.0°
OG2AS1OG3HO342.4°90.0°
OG2AS1C3BPB33.5°90.0°
OG2AS1C3BH3B185.4°90.0°
OG2AS1C3BH3B2153.5°90.0°
OG3AS1OG1C3B109.9°90.0°
OG3AS1OG2HO2159.7°90.0°
OG3AS1C3BPB155.0°90.0°
OG3AS1C3BH3B136.0°90.0°
OG3AS1C3BH3B285.0°90.0°
OG1AS1OG2HO231.7°90.0°
OG1AS1OG3HO3171.1°90.0°
OG1AS1C3BPB88.6°90.0°
OG1AS1C3BH3B1152.4°90.0°
OG1AS1C3BH3B231.4°90.0°
C3BAS1OG2HO288.2°90.0°
C3BAS1OG3HO374.1°90.0°
AS1C3BPBO13141.3°90.0°
AS1C3BPBOB2101.0°90.0°
AS1C3BPBH3B1119.0°90.0°
AS1C3BPBH3B2120.0°90.0°
AS1C3BPBOB117.1°90.0°
AS1C3BH3B1H3B2119.3°90.0°
O5'PAO11O13121.9°90.0°
O5'PAO11O12118.6°90.0°
O5'PAO13O12118.9°90.0°
O5'PAO11HOB108.1°90.0°
O5'PAO13PB144.2°90.0°
PAO5'C5'C4'112.0°90.0°
PAO5'C5'H5'17.2°90.0°
PAO5'C5'H5'2128.0°90.0°
O11PAO13O12119.7°90.0°
O11PAO5'C5'71.5°90.0°
O11PAO13PB22.8°90.0°
O13PAO5'C5'50.4°90.0°
O13PAO11HOB13.8°90.0°
PAO13PBOB2159.2°90.0°
PAO13PBC3B86.8°90.0°
PAO13PBOB136.1°90.0°
O12PAO5'C5'169.5°90.0°
O12PAO11HOB133.3°90.0°
O12PAO13PB96.9°90.0°
O5'C5'C4'H5'1119.2°90.0°
O5'C5'C4'H5'2120.0°90.0°
O5'C5'H5'1H5'2119.5°90.0°
O5'C5'C4'O4'57.8°90.0°
O5'C5'C4'C3'177.9°90.0°
O5'C5'C4'H4'64.2°90.0°
O13PBOB2C3B116.3°90.0°
O13PBOB2OB1125.0°90.0°
O13PBC3BOB1124.2°90.0°
O13PBC3BH3B199.7°90.0°
O13PBC3BH3B221.3°90.0°
O13PBOB1HB1178.4°90.0°
C4'C5'H5'1H5'2119.4°90.0°
C5'C4'O4'C3'126.0°90.0°
C5'C4'O4'H4'115.5°90.0°
C5'C4'C3'H4'115.2°90.0°
C5'C4'O4'C1'130.1°90.0°
C5'C4'C3'C2'105.1°90.0°
C5'C4'C3'O3'133.6°90.0°
C5'C4'C3'H3'16.4°90.0°
H5'1C5'C4'O4'177.0°90.0°
H5'1C5'C4'C3'62.9°90.0°
H5'1C5'C4'H4'55.0°90.0°
H5'2C5'C4'O4'62.2°90.0°
H5'2C5'C4'C3'57.9°90.0°
H5'2C5'C4'H4'175.8°90.0°
O4'C4'C3'H4'122.2°90.0°
O4'C4'C3'C2'17.5°90.0°
C4'O4'C1'C2'24.0°90.0°
O4'C4'C3'O3'103.8°90.0°
O4'C4'C3'H3'139.1°90.0°
C4'O4'C1'N9151.3°90.0°
C4'O4'C1'H1'92.7°90.0°
C3'C4'O4'C1'4.1°90.0°
C4'C3'C2'O2'149.0°90.0°
C4'C3'C2'O3'121.5°90.0°
C4'C3'C2'H3'121.4°90.0°
C4'C3'C2'C1'30.9°90.0°
C4'C3'C2'H2'91.4°90.0°
C4'C3'O3'H3'121.4°90.0°
C4'C3'O3'HO3'21.2°90.0°
H4'C4'O4'C1'114.4°90.0°
H4'C4'C3'C2'139.7°90.0°
H4'C4'C3'O3'18.4°90.0°
H4'C4'C3'H3'98.7°90.0°
O4'C1'C2'O2'149.0°90.0°
O4'C1'C2'C3'33.5°90.0°
O4'C1'C2'N9118.3°90.0°
O4'C1'C2'H1'126.0°90.0°
O4'C1'C2'H2'91.0°90.0°
O4'C1'N9H1'125.9°90.0°
O4'C1'N9C4119.5°90.0°
O4'C1'N9C841.6°90.0°
O2'C2'C3'C1'118.1°90.0°
O2'C2'C3'H2'119.6°90.0°
O2'C2'C1'H2'120.0°90.0°
O2'C2'C3'O3'27.5°90.0°
O2'C2'C3'H3'89.6°90.0°
O2'C2'C1'N992.7°90.0°
O2'C2'C1'H1'23.0°90.0°
C3'C2'C1'H2'124.6°90.0°
C3'C2'O2'HO2'163.1°90.0°
C2'C3'O3'H3'121.6°90.0°
C2'C3'O3'HO3'95.7°90.0°
C3'C2'C1'N9151.9°90.0°
C3'C2'C1'H1'92.4°90.0°
C1'C2'O2'HO2'51.2°90.0°
C1'C2'C3'O3'90.6°90.0°
C1'C2'C3'H3'152.3°90.0°
C2'C1'N9H1'116.4°90.0°
C2'C1'N9C4122.8°90.0°
C2'C1'N9C876.0°90.0°
H2'C2'O2'HO2'71.8°90.0°
H2'C2'C3'O3'147.2°90.0°
H2'C2'C3'H3'30.0°90.0°
H2'C2'C1'N927.3°90.0°
H2'C2'C1'H1'143.0°90.0°
H3'C3'O3'HO3'142.7°90.0°
C1'N9C4C8163.3°90.0°
C1'N9C4N315.0°90.0°
C1'N9C4C5170.6°90.0°
C1'N9C8N7173.3°90.0°
C1'N9C8H86.7°90.0°
H1'C1'N9C46.4°90.0°
H1'C1'N9C8167.6°90.0°
N9C4N3C5173.5°90.0°
N9C4N3C2174.0°90.0°
N9C4C5C6175.6°90.0°
N9C4C5N75.1°90.0°
C4N9C8N77.5°90.0°
C4N9C8H8172.5°90.0°
C8N9C4N3178.3°90.0°
C8N9C4C57.2°90.0°
N9C8N7C54.4°90.0°
N9C8N7H8180.0°90.0°
C4N3C2N10.7°90.0°
C4N3C2H2179.3°90.0°
N3C4C5C60.9°90.0°
N3C4C5N7179.8°90.0°
C5C4N3C20.6°90.0°
C4C5C6N10.0°90.0°
C4C5C6N6179.4°90.0°
C4C5C6N7179.1°90.0°
C4C5N7C80.7°90.0°
N3C2N1H2180.0°90.0°
N3C2N1C61.5°90.0°
C2N1C6N6179.5°90.0°
C2N1C6C51.0°90.0°
H2C2N1C6178.5°90.0°
N1C6N6C5179.5°90.0°
N1C6N6HN617.9°90.0°
N1C6N6HN62112.0°90.0°
N1C6C5N7179.1°90.0°
C6N6HN61HN62120.0°90.0°
N6C6C5N70.3°90.0°
C5C6N6HN61171.5°90.0°
C5C6N6HN6268.5°90.0°
C6C5N7C8179.8°90.0°
C5N7C8H8175.6°90.0°
OB2PBC3BOB1118.1°90.0°
OB2PBC3BH3B118.0°90.0°
OB2PBC3BH3B2139.0°90.0°
OB2PBOB1HB154.8°90.0°
PBC3BH3B1H3B2119.3°90.0°
C3BPBOB1HB160.2°90.0°
OB1PBC3BH3B1136.1°90.0°
OB1PBC3BH3B2102.9°90.0°

227111

PDB entries from 2024-11-06

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