ASM
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.46Å | 1.46Å | |
N | H | sing | 1.00Å | 1.00Å | |
N | H2 | sing | 1.00Å | 1.00Å | |
CA | CB | sing | 1.53Å | 1.52Å | |
CA | C | sing | 1.52Å | 1.54Å | |
CA | HA | sing | 1.10Å | 1.10Å | |
CB | CG | sing | 1.50Å | 1.50Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.10Å | 1.10Å | |
CG | OD1 | doub | 1.22Å | 1.23Å | |
CG | ND2 | sing | 1.40Å | 1.34Å | |
ND2 | CE1 | sing | 1.38Å | 1.43Å | Aromatic |
ND2 | CE2 | sing | 1.38Å | 1.44Å | Aromatic |
CE1 | CH1 | doub | 1.38Å | 1.51Å | Aromatic |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CH1 | CH2 | sing | 1.41Å | 1.50Å | Aromatic |
CH1 | HH1 | sing | 1.08Å | 1.08Å | |
CE2 | CH2 | doub | 1.38Å | 1.50Å | Aromatic |
CE2 | HE2 | sing | 1.08Å | 1.08Å | |
CH2 | HH2 | sing | 1.08Å | 1.08Å | |
C | O | doub | 1.22Å | 1.24Å | |
C | OXT | sing | 1.36Å | 123.01Å | |
OXT | HXT | sing | 0.98Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 109.5° | 118.0° |
CA | N | H2 | 109.5° | 117.9° |
N | CA | CB | 107.9° | 109.8° |
N | CA | C | 113.7° | 106.4° |
N | CA | HA | 107.5° | 110.0° |
H | N | H2 | 109.5° | 122.7° |
CB | CA | C | 108.9° | 112.5° |
CB | CA | HA | 112.4° | 110.2° |
CA | CB | CG | 112.3° | 110.0° |
CA | CB | HB2 | 107.9° | 112.5° |
CA | CB | HB3 | 108.5° | 110.8° |
C | CA | HA | 106.5° | 107.9° |
CA | C | O | 121.3° | 125.3° |
CA | C | OXT | 88.7° | 112.1° |
CG | CB | HB2 | 107.9° | 108.4° |
CG | CB | HB3 | 108.5° | 106.4° |
CB | CG | OD1 | 120.0° | 124.9° |
CB | CG | ND2 | 117.3° | 115.8° |
HB2 | CB | HB3 | 111.7° | 108.6° |
OD1 | CG | ND2 | 122.8° | 119.2° |
CG | ND2 | CE1 | 123.0° | 124.7° |
CG | ND2 | CE2 | 119.4° | 128.0° |
CE1 | ND2 | CE2 | 117.6° | 107.4° |
ND2 | CE1 | CH1 | 102.5° | 109.0° |
ND2 | CE1 | HE1 | 128.8° | 120.8° |
ND2 | CE2 | CH2 | 102.4° | 109.0° |
ND2 | CE2 | HE2 | 128.8° | 121.2° |
CH1 | CE1 | HE1 | 128.7° | 130.1° |
CE1 | CH1 | CH2 | 108.3° | 107.2° |
CE1 | CH1 | HH1 | 125.9° | 125.5° |
CH2 | CH1 | HH1 | 125.8° | 127.2° |
CH1 | CH2 | CE2 | 108.7° | 107.4° |
CH1 | CH2 | HH2 | 125.7° | 127.1° |
CH2 | CE2 | HE2 | 128.8° | 129.8° |
CE2 | CH2 | HH2 | 125.6° | 125.6° |
O | C | OXT | 117.5° | 122.6° |
C | OXT | HXT | 88.7° | 114.6° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 120.0° | 166.0° |
N | CA | CB | C | 123.9° | 118.3° |
N | CA | CB | HA | 118.4° | 121.3° |
N | CA | C | HA | 118.2° | 118.0° |
N | CA | CB | CG | 55.7° | 178.7° |
N | CA | CB | HB2 | 174.5° | 57.8° |
N | CA | CB | HB3 | 64.3° | 64.0° |
N | CA | C | O | 54.8° | 62.0° |
N | CA | C | OXT | 176.5° | 119.0° |
H | N | CA | CB | 82.9° | 122.7° |
H | N | CA | C | 38.1° | 115.2° |
H | N | CA | HA | 155.7° | 1.3° |
H2 | N | CA | CB | 157.1° | 44.0° |
H2 | N | CA | C | 81.9° | 78.1° |
H2 | N | CA | HA | 35.7° | 165.4° |
CB | CA | C | HA | 121.4° | 121.7° |
CA | CB | CG | HB2 | 118.8° | 123.3° |
CA | CB | CG | HB3 | 120.0° | 120.1° |
CA | CB | HB2 | HB3 | 119.2° | 123.0° |
CA | CB | CG | OD1 | 0.2° | 3.2° |
CA | CB | CG | ND2 | 179.4° | 176.7° |
CB | CA | C | O | 65.6° | 58.3° |
CB | CA | C | OXT | 56.1° | 120.7° |
C | CA | CB | CG | 179.5° | 60.4° |
C | CA | CB | HB2 | 61.7° | 60.5° |
C | CA | CB | HB3 | 59.5° | 177.8° |
CA | C | O | OXT | 106.6° | 178.9° |
CA | C | OXT | HXT | 180.0° | 179.0° |
HA | CA | CB | CG | 62.7° | 60.0° |
HA | CA | CB | HB2 | 56.1° | 179.1° |
HA | CA | CB | HB3 | 177.3° | 57.4° |
HA | CA | C | O | 173.0° | 180.0° |
HA | CA | C | OXT | 65.3° | 1.0° |
CG | CB | HB2 | HB3 | 119.2° | 115.1° |
CB | CG | OD1 | ND2 | 179.6° | 179.9° |
CB | CG | ND2 | CE1 | 7.7° | 180.0° |
CB | CG | ND2 | CE2 | 171.6° | 0.1° |
HB2 | CB | CG | OD1 | 119.0° | 120.1° |
HB2 | CB | CG | ND2 | 60.6° | 60.0° |
HB3 | CB | CG | OD1 | 119.8° | 123.3° |
HB3 | CB | CG | ND2 | 60.6° | 56.6° |
OD1 | CG | ND2 | CE1 | 172.7° | 0.1° |
OD1 | CG | ND2 | CE2 | 8.0° | 180.0° |
CG | ND2 | CE1 | CE2 | 179.3° | 179.9° |
CG | ND2 | CE1 | CH1 | 173.8° | 180.0° |
CG | ND2 | CE1 | HE1 | 6.2° | 0.1° |
CG | ND2 | CE2 | CH2 | 173.1° | 180.0° |
CG | ND2 | CE2 | HE2 | 6.9° | 0.0° |
ND2 | CE1 | CH1 | HE1 | 180.0° | 180.0° |
ND2 | CE1 | CH1 | CH2 | 3.0° | 0.0° |
ND2 | CE1 | CH1 | HH1 | 176.9° | 180.0° |
CE1 | ND2 | CE2 | CH2 | 7.6° | 0.1° |
CE1 | ND2 | CE2 | HE2 | 172.4° | 179.9° |
CE2 | ND2 | CE1 | CH1 | 6.9° | 0.0° |
CE2 | ND2 | CE1 | HE1 | 173.1° | 180.0° |
ND2 | CE2 | CH2 | CH1 | 4.9° | 0.1° |
ND2 | CE2 | CH2 | HE2 | 180.0° | 180.0° |
ND2 | CE2 | CH2 | HH2 | 175.1° | 180.0° |
CE1 | CH1 | CH2 | HH1 | 180.0° | 180.0° |
CE1 | CH1 | CH2 | CE2 | 1.2° | 0.1° |
CE1 | CH1 | CH2 | HH2 | 178.8° | 180.0° |
HE1 | CE1 | CH1 | CH2 | 177.0° | 179.9° |
HE1 | CE1 | CH1 | HH1 | 3.0° | 0.0° |
CH1 | CH2 | CE2 | HH2 | 180.0° | 179.9° |
CH1 | CH2 | CE2 | HE2 | 175.1° | 179.9° |
HH1 | CH1 | CH2 | CE2 | 178.8° | 179.9° |
HH1 | CH1 | CH2 | HH2 | 1.2° | 0.1° |
HE2 | CE2 | CH2 | HH2 | 4.9° | 0.0° |
O | C | OXT | HXT | 55.0° | 0.0° |