ARV
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.46Å | 1.45Å | |
N | H | sing | 1.00Å | 1.00Å | |
N | H2 | sing | 1.00Å | 1.00Å | |
CA | C | sing | 1.52Å | 1.51Å | |
CA | CB | sing | 1.54Å | 1.53Å | |
CA | HA | sing | 1.10Å | 1.10Å | |
C | O | doub | 1.22Å | 1.31Å | |
C | OXT | sing | 1.36Å | 1.18Å | |
CB | CG | sing | 1.54Å | 1.53Å | |
CB | HB2 | sing | 1.10Å | 1.10Å | |
CB | HB3 | sing | 1.10Å | 1.10Å | |
CG | CD | sing | 1.53Å | 1.52Å | |
CG | HG2 | sing | 1.10Å | 1.10Å | |
CG | HG3 | sing | 1.10Å | 1.10Å | |
CD | NE | sing | 1.44Å | 1.50Å | |
CD | HD2 | sing | 1.10Å | 1.10Å | |
CD | HD3 | sing | 1.09Å | 1.10Å | |
NE | CZ | sing | 1.41Å | 1.36Å | |
NE | HE | sing | 1.03Å | 1.00Å | |
CZ | NH1 | sing | 1.39Å | 1.28Å | |
CZ | NH2 | doub | 1.40Å | 1.33Å | |
NH1 | HH11 | sing | 1.02Å | 1.02Å | |
NH1 | HH12 | sing | 1.02Å | 1.02Å | |
NH2 | C1 | sing | 1.46Å | 1.48Å | |
NH2 | HH2 | sing | 1.02Å | 1.00Å | |
OXT | HXT | sing | 0.98Å | 0.95Å | |
C1 | C2 | sing | 1.49Å | 1.53Å | |
C1 | HC11 | sing | 1.09Å | 1.10Å | |
C1 | HC12 | sing | 1.09Å | 1.10Å | |
C2 | C3 | doub | 1.34Å | 1.34Å | |
C2 | HC2 | sing | 1.09Å | 1.08Å | |
C3 | HC31 | sing | 1.08Å | 1.08Å | |
C3 | HC32 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 109.5° | 117.9° |
CA | N | H2 | 109.5° | 118.0° |
N | CA | C | 111.5° | 108.2° |
N | CA | CB | 108.5° | 111.5° |
N | CA | HA | 109.1° | 107.6° |
H | N | H2 | 109.5° | 122.7° |
C | CA | CB | 110.4° | 112.0° |
C | CA | HA | 107.1° | 107.9° |
CA | C | O | 118.2° | 125.5° |
CA | C | OXT | 122.9° | 111.9° |
CB | CA | HA | 110.3° | 109.6° |
CA | CB | CG | 114.7° | 114.6° |
CA | CB | HB2 | 106.6° | 108.9° |
CA | CB | HB3 | 107.8° | 108.8° |
O | C | OXT | 119.0° | 122.6° |
C | OXT | HXT | 109.5° | 115.2° |
CG | CB | HB2 | 106.6° | 109.1° |
CG | CB | HB3 | 107.8° | 108.9° |
CB | CG | CD | 111.3° | 112.4° |
CB | CG | HG2 | 108.5° | 109.5° |
CB | CG | HG3 | 108.9° | 110.1° |
HB2 | CB | HB3 | 113.7° | 106.3° |
CD | CG | HG2 | 108.5° | 108.0° |
CD | CG | HG3 | 108.9° | 109.5° |
CG | CD | NE | 109.6° | 111.0° |
CG | CD | HD2 | 109.4° | 109.5° |
CG | CD | HD3 | 109.4° | 110.6° |
HG2 | CG | HG3 | 110.8° | 107.1° |
NE | CD | HD2 | 109.4° | 108.5° |
NE | CD | HD3 | 109.4° | 109.7° |
CD | NE | CZ | 130.7° | 123.0° |
CD | NE | HE | 114.7° | 120.4° |
HD2 | CD | HD3 | 109.6° | 107.4° |
CZ | NE | HE | 114.7° | 116.5° |
NE | CZ | NH1 | 115.0° | 120.2° |
NE | CZ | NH2 | 130.0° | 118.9° |
NH1 | CZ | NH2 | 114.9° | 120.9° |
CZ | NH1 | HH11 | 110.2° | 121.7° |
CZ | NH1 | HH12 | 115.0° | 121.7° |
CZ | NH2 | C1 | 123.5° | 122.5° |
CZ | NH2 | HH2 | 101.7° | 118.1° |
HH11 | NH1 | HH12 | 110.2° | 116.6° |
C1 | NH2 | HH2 | 101.7° | 119.4° |
NH2 | C1 | C2 | 109.8° | 108.4° |
NH2 | C1 | HC11 | 109.3° | 108.4° |
NH2 | C1 | HC12 | 109.4° | 108.3° |
C2 | C1 | HC11 | 109.3° | 110.4° |
C2 | C1 | HC12 | 109.4° | 112.7° |
C1 | C2 | C3 | 120.6° | 123.9° |
C1 | C2 | HC2 | 119.7° | 117.4° |
HC11 | C1 | HC12 | 109.7° | 108.5° |
C3 | C2 | HC2 | 119.7° | 118.7° |
C2 | C3 | HC31 | 126.0° | 120.4° |
C2 | C3 | HC32 | 108.0° | 121.6° |
HC31 | C3 | HC32 | 126.0° | 118.1° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 120.0° | 166.0° |
N | CA | C | CB | 120.6° | 123.3° |
N | CA | C | HA | 119.3° | 116.1° |
N | CA | CB | HA | 119.4° | 119.0° |
N | CA | C | O | 179.9° | 3.9° |
N | CA | C | OXT | 0.4° | 176.0° |
N | CA | CB | CG | 56.7° | 63.8° |
N | CA | CB | HB2 | 174.3° | 58.7° |
N | CA | CB | HB3 | 63.3° | 174.1° |
H | N | CA | C | 149.6° | 171.2° |
H | N | CA | CB | 88.7° | 65.3° |
H | N | CA | HA | 31.5° | 54.9° |
H2 | N | CA | C | 90.4° | 22.1° |
H2 | N | CA | CB | 31.4° | 101.4° |
H2 | N | CA | HA | 151.5° | 138.4° |
C | CA | CB | HA | 118.2° | 119.6° |
CA | C | O | OXT | 179.7° | 179.9° |
C | CA | CB | CG | 179.1° | 57.6° |
C | CA | CB | HB2 | 63.2° | 180.0° |
C | CA | CB | HB3 | 59.1° | 64.5° |
CA | C | OXT | HXT | 179.7° | 180.0° |
CB | CA | C | O | 59.5° | 119.3° |
CB | CA | C | OXT | 120.2° | 60.8° |
CA | CB | CG | HB2 | 117.7° | 122.3° |
CA | CB | CG | HB3 | 120.0° | 122.1° |
CA | CB | HB2 | HB3 | 118.6° | 117.1° |
CA | CB | CG | CD | 160.9° | 177.6° |
CA | CB | CG | HG2 | 41.6° | 57.5° |
CA | CB | CG | HG3 | 79.1° | 60.0° |
HA | CA | C | O | 60.6° | 120.0° |
HA | CA | C | OXT | 119.7° | 59.9° |
HA | CA | CB | CG | 62.7° | 177.2° |
HA | CA | CB | HB2 | 55.0° | 60.3° |
HA | CA | CB | HB3 | 177.3° | 55.1° |
O | C | OXT | HXT | 0.0° | 0.0° |
CG | CB | HB2 | HB3 | 118.5° | 117.2° |
CB | CG | CD | HG2 | 119.3° | 121.0° |
CB | CG | CD | HG3 | 120.0° | 122.7° |
CB | CG | HG2 | HG3 | 119.5° | 119.3° |
CB | CG | CD | NE | 46.2° | 60.2° |
CB | CG | CD | HD2 | 166.2° | 180.0° |
CB | CG | CD | HD3 | 73.8° | 61.8° |
HB2 | CB | CG | CD | 81.5° | 60.0° |
HB2 | CB | CG | HG2 | 159.3° | 179.9° |
HB2 | CB | CG | HG3 | 38.5° | 62.4° |
HB3 | CB | CG | CD | 40.9° | 55.6° |
HB3 | CB | CG | HG2 | 78.4° | 64.6° |
HB3 | CB | CG | HG3 | 160.9° | 178.0° |
CD | CG | HG2 | HG3 | 119.5° | 117.9° |
CG | CD | NE | HD2 | 120.0° | 120.4° |
CG | CD | NE | HD3 | 120.0° | 122.5° |
CG | CD | HD2 | HD3 | 120.0° | 120.1° |
CG | CD | NE | CZ | 178.7° | 179.6° |
CG | CD | NE | HE | 1.2° | 0.4° |
HG2 | CG | CD | NE | 73.0° | 178.8° |
HG2 | CG | CD | HD2 | 46.9° | 59.0° |
HG2 | CG | CD | HD3 | 167.0° | 59.2° |
HG3 | CG | CD | NE | 166.2° | 62.5° |
HG3 | CG | CD | HD2 | 73.8° | 57.3° |
HG3 | CG | CD | HD3 | 46.2° | 175.5° |
NE | CD | HD2 | HD3 | 120.0° | 118.5° |
CD | NE | CZ | HE | 180.0° | 180.0° |
CD | NE | CZ | NH1 | 179.2° | 0.0° |
CD | NE | CZ | NH2 | 0.4° | 180.0° |
HD2 | CD | NE | CZ | 61.3° | 60.0° |
HD2 | CD | NE | HE | 118.7° | 120.0° |
HD3 | CD | NE | CZ | 58.8° | 57.1° |
HD3 | CD | NE | HE | 121.2° | 122.9° |
NE | CZ | NH1 | NH2 | 179.7° | 180.0° |
NE | CZ | NH1 | HH11 | 54.7° | 0.0° |
NE | CZ | NH1 | HH12 | 180.0° | 179.9° |
NE | CZ | NH2 | C1 | 0.1° | 0.0° |
NE | CZ | NH2 | HH2 | 112.7° | 180.0° |
HE | NE | CZ | NH1 | 0.8° | 180.0° |
HE | NE | CZ | NH2 | 179.6° | 0.0° |
CZ | NH1 | HH11 | HH12 | 128.0° | 179.9° |
NH1 | CZ | NH2 | C1 | 179.7° | 180.0° |
NH1 | CZ | NH2 | HH2 | 66.9° | 0.0° |
NH2 | CZ | NH1 | HH11 | 125.0° | 180.0° |
NH2 | CZ | NH1 | HH12 | 0.3° | 0.1° |
CZ | NH2 | C1 | HH2 | 112.8° | 180.0° |
CZ | NH2 | C1 | C2 | 118.3° | 179.9° |
CZ | NH2 | C1 | HC11 | 121.8° | 60.0° |
CZ | NH2 | C1 | HC12 | 1.7° | 57.5° |
NH2 | C1 | C2 | HC11 | 119.9° | 118.7° |
NH2 | C1 | C2 | HC12 | 120.0° | 119.8° |
NH2 | C1 | HC11 | HC12 | 119.9° | 117.4° |
NH2 | C1 | C2 | C3 | 136.1° | 121.4° |
NH2 | C1 | C2 | HC2 | 43.9° | 59.3° |
HH2 | NH2 | C1 | C2 | 5.5° | 0.1° |
HH2 | NH2 | C1 | HC11 | 125.4° | 120.0° |
HH2 | NH2 | C1 | HC12 | 114.5° | 122.5° |
C2 | C1 | HC11 | HC12 | 119.9° | 123.9° |
C1 | C2 | C3 | HC2 | 180.0° | 179.3° |
C1 | C2 | C3 | HC31 | 0.0° | 179.7° |
C1 | C2 | C3 | HC32 | 180.0° | 0.4° |
HC11 | C1 | C2 | C3 | 104.0° | 119.9° |
HC11 | C1 | C2 | HC2 | 76.0° | 59.4° |
HC12 | C1 | C2 | C3 | 16.1° | 1.6° |
HC12 | C1 | C2 | HC2 | 163.9° | 179.1° |
C2 | C3 | HC31 | HC32 | 180.0° | 179.9° |
HC2 | C2 | C3 | HC31 | 180.0° | 0.4° |
HC2 | C2 | C3 | HC32 | 0.0° | 179.7° |