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ARU

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2doub1.32Å1.30ÅAromatic
N1C6sing1.33Å1.32ÅAromatic
C2N3sing1.32Å1.29ÅAromatic
N3C4doub1.33Å1.32ÅAromatic
C4C5sing1.40Å1.37ÅAromatic
C4N9sing1.37Å1.30ÅAromatic
C5C6doub1.40Å1.38ÅAromatic
C5N7sing1.35Å1.31ÅAromatic
C6N6sing1.38Å1.32Å
N6CABsing1.47Å1.46Å
N6CADsing1.47Å1.46Å
N7C8doub1.30Å1.32ÅAromatic
C8N9sing1.36Å1.32ÅAromatic
N9C1'sing1.46Å1.44Å
C1'C2'sing1.55Å1.50Å
C1'O4'sing1.44Å1.40Å
C2'O2'sing1.43Å1.39Å
C2'C3'sing1.55Å1.52Å
C3'O3'sing1.43Å1.42Å
C3'C4'sing1.54Å1.51Å
C4'O4'sing1.44Å1.42Å
C4'C5'sing1.53Å1.47Å
C5'O5'sing1.43Å1.34Å
O5'PAOsing1.61Å1.53Å
CAACABsing1.53Å1.51Å
CADCAEsing1.53Å1.52Å
OAFPAKsing1.61Å1.38Å
BRAGCALsing1.97Å1.89Å
OAHPAMsing1.61Å1.41Å
OAIPAOdoub1.48Å1.42Å
OAJPAKdoub1.48Å1.37Å
PAKCALsing1.82Å1.89Å
PAKOAVsing1.61Å1.40Å
CALPAMsing1.82Å1.87Å
CALBRAWsing1.97Å1.95Å
PAMOANsing1.61Å1.54Å
PAMOAXdoub1.48Å1.39Å
OANPAOsing1.61Å1.61Å
PAOOAYsing1.61Å1.55Å
C2H2sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
C1'H1'sing1.09Å1.10Å
C2'H2'sing1.09Å1.10Å
O2'HO2'sing0.97Å0.95Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C4'H4'sing1.09Å1.10Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
CAAHAAsing1.09Å1.10Å
CAAHAAAsing1.09Å1.10Å
CAAHAABsing1.09Å1.10Å
CABHABsing1.09Å1.10Å
CABHABAsing1.09Å1.10Å
CADHADsing1.09Å1.10Å
CADHADAsing1.09Å1.10Å
CAEHAEsing1.09Å1.10Å
CAEHAEAsing1.09Å1.10Å
CAEHAEBsing1.09Å1.10Å
OAFHOAFsing0.97Å0.95Å
OAHHOAHsing0.97Å0.95Å
OAVHOAVsing0.97Å0.95Å
OAYHOAYsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C6121.0°121.2°
N1C2N3123.1°122.4°
N1C2H2118.5°118.8°
N1C6C5118.1°118.4°
N1C6N6119.8°120.7°
C2N3C4119.1°120.7°
N3C2H2118.5°118.8°
N3C4C5120.6°119.1°
N3C4N9131.5°134.9°
C5C4N9107.9°106.0°
C4C5C6118.1°118.2°
C4C5N7107.2°107.1°
C4N9C8107.7°107.4°
C4N9C1'123.8°126.3°
C6C5N7134.7°134.7°
C5C6N6122.1°120.8°
C5N7C8107.4°109.4°
C6N6CAB120.3°111.0°
C6N6CAD119.9°111.0°
CABN6CAD119.7°111.0°
N6CABCAA108.9°109.5°
N6CABHAB109.6°109.5°
N6CABHABA109.6°109.5°
N6CADCAE110.7°109.5°
N6CADHAD109.0°109.5°
N6CADHADA109.0°109.4°
N7C8N9109.8°110.0°
N7C8H8125.1°125.0°
C8N9C1'128.5°126.3°
N9C8H8125.1°125.0°
N9C1'C2'118.1°110.6°
N9C1'O4'107.8°110.6°
N9C1'H1'102.2°110.6°
C2'C1'O4'99.3°103.5°
C1'C2'O2'110.9°110.9°
C1'C2'C3'102.0°102.1°
C2'C1'H1'110.2°110.7°
C1'C2'H2'114.3°110.9°
C1'O4'C4'102.1°107.0°
O4'C1'H1'120.1°110.7°
O2'C2'C3'112.1°110.9°
O2'C2'H2'104.6°110.8°
C2'O2'HO2'109.5°114.0°
C2'C3'O3'112.3°110.5°
C2'C3'C4'102.1°104.2°
C3'C2'H2'113.1°111.0°
C2'C3'H3'112.1°110.5°
O3'C3'C4'108.2°110.5°
O3'C3'H3'106.4°110.5°
C3'O3'HO3'109.5°114.0°
C3'C4'O4'104.5°107.3°
C3'C4'C5'101.0°109.9°
C4'C3'H3'115.9°110.6°
C3'C4'H4'119.2°109.9°
O4'C4'C5'113.9°109.9°
O4'C4'H4'107.6°109.9°
C4'C5'O5'106.6°109.4°
C5'C4'H4'110.7°110.0°
C4'C5'H5'110.4°109.5°
C4'C5'H5'A110.4°109.5°
C5'O5'PAO120.8°123.0°
O5'C5'H5'110.4°109.5°
O5'C5'H5'A110.4°109.5°
O5'PAOOAI107.7°109.5°
O5'PAOOAN104.5°109.5°
O5'PAOOAY103.0°109.5°
CABCAAHAA109.5°109.5°
CABCAAHAAA109.5°109.5°
CABCAAHAAB109.5°109.5°
CAACABHAB109.7°109.4°
CAACABHABA109.6°109.4°
CAECADHAD109.1°109.5°
CAECADHADA109.1°109.5°
CADCAEHAE109.5°109.5°
CADCAEHAEA109.5°109.5°
CADCAEHAEB109.5°109.5°
OAFPAKOAJ112.8°109.5°
OAFPAKCAL105.7°109.5°
OAFPAKOAV112.5°109.5°
PAKOAFHOAF109.5°114.0°
BRAGCALPAK111.8°109.5°
BRAGCALPAM103.1°109.4°
BRAGCALBRAW110.7°109.5°
OAHPAMCAL105.6°109.5°
OAHPAMOAN115.2°109.5°
OAHPAMOAX112.5°109.5°
PAMOAHHOAH109.5°114.0°
OAIPAOOAN122.6°109.5°
OAIPAOOAY115.4°109.4°
OAJPAKCAL108.0°109.5°
OAJPAKOAV112.9°109.4°
CALPAKOAV104.1°109.5°
PAKCALPAM113.9°109.5°
PAKCALBRAW106.0°109.5°
PAKOAVHOAV109.5°114.0°
PAMCALBRAW111.4°109.5°
CALPAMOAN99.3°109.5°
CALPAMOAX112.0°109.5°
OANPAMOAX111.4°109.5°
PAMOANPAO126.5°134.0°
OANPAOOAY101.6°109.5°
PAOOAYHOAY109.5°114.0°
H5'C5'H5'A108.5°109.5°
HAACAAHAAA109.5°109.4°
HAACAAHAAB109.5°109.4°
HAAACAAHAAB109.5°109.5°
HABCABHABA109.3°109.4°
HADCADHADA109.9°109.4°
HAECAEHAEA109.4°109.5°
HAECAEHAEB109.4°109.4°
HAEACAEHAEB109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1C2N3H2180.0°180.0°
N1C2N3C40.2°0.0°
C2N1C6C51.2°0.0°
C2N1C6N6179.9°180.0°
C6N1C2N31.1°0.0°
N1C6C5C40.5°0.0°
N1C6C5N6178.7°180.0°
N1C6C5N7179.2°179.9°
N1C6N6CAB170.5°0.0°
N1C6N6CAD11.7°123.9°
C6N1C2H2178.9°180.0°
C2N3C4C50.6°0.0°
C2N3C4N9179.4°180.0°
N3C4C5N9179.1°180.0°
N3C4C5C60.4°0.0°
N3C4C5N7179.8°180.0°
N3C4N9C8179.4°180.0°
N3C4N9C1'1.9°0.0°
C4N3C2H2179.8°180.0°
C4C5C6N7179.7°179.9°
C4C5C6N6179.1°180.0°
C4C5N7C80.7°0.1°
C5C4N9C80.4°0.0°
C5C4N9C1'179.1°180.0°
N9C4C5C6179.5°180.0°
N9C4C5N70.7°0.0°
C4N9C8N70.0°0.0°
C4N9C8C1'178.6°180.0°
C4N9C1'C2'153.0°85.0°
C4N9C1'O4'95.6°160.9°
C4N9C8H8180.0°180.0°
C4N9C1'H1'31.9°37.9°
C5C6N6CAB10.9°180.0°
C5C6N6CAD166.9°56.1°
C6C5N7C8179.6°180.0°
N7C5C6N60.6°0.1°
C5N7C8N90.5°0.1°
C5N7C8H8179.5°180.0°
C6N6CABCAD177.8°124.0°
C6N6CABCAA82.0°76.1°
C6N6CADCAE150.1°163.7°
C6N6CABHAB38.0°43.9°
C6N6CABHABA158.0°163.9°
C6N6CADHAD30.1°76.2°
C6N6CADHADA89.9°43.7°
N6CABCAAHAB120.0°120.0°
N6CABCAAHABA120.0°120.0°
CABN6CADCAE32.1°72.3°
N6CABCAAHAA180.0°54.8°
N6CABCAAHAAA60.0°65.2°
N6CABCAAHAAB60.0°174.8°
N6CABHABHABA120.2°120.1°
CABN6CADHAD152.1°47.8°
CABN6CADHADA87.9°167.7°
CADN6CABCAA95.9°159.9°
N6CADCAEHAD120.0°120.1°
N6CADCAEHADA120.0°120.0°
CADN6CABHAB144.1°80.1°
CADN6CABHABA24.1°39.9°
N6CADHADHADA119.5°119.9°
N6CADCAEHAE180.0°61.1°
N6CADCAEHAEA60.0°58.9°
N6CADCAEHAEB60.0°178.9°
N7C8N9H8180.0°179.9°
N7C8N9C1'178.6°179.9°
C8N9C1'C2'28.6°95.0°
C8N9C1'O4'82.8°19.0°
C8N9C1'H1'149.7°142.0°
N9C1'C2'O4'116.1°118.5°
N9C1'C2'H1'116.8°122.9°
N9C1'O4'H1'116.3°123.0°
N9C1'C2'O2'80.3°86.3°
N9C1'C2'C3'160.1°155.5°
N9C1'O4'C4'178.7°158.5°
C1'N9C8H81.4°0.0°
N9C1'C2'H2'37.6°37.2°
C2'C1'O4'H1'120.1°118.6°
C1'C2'O2'C3'113.3°112.7°
C1'C2'O2'H2'123.7°123.6°
C1'C2'C3'H2'123.3°118.2°
C1'C2'C3'O3'98.2°97.8°
C1'C2'C3'C4'17.4°20.9°
C2'C1'O4'C4'55.0°40.1°
C1'C2'O2'HO2'180.0°180.0°
C1'C2'C3'H3'142.1°139.7°
O4'C1'C2'O2'163.6°155.2°
O4'C1'C2'C3'44.0°37.0°
C1'O4'C4'C3'44.3°26.5°
C1'O4'C4'C5'153.6°145.9°
O4'C1'C2'H2'78.5°81.2°
C1'O4'C4'H4'83.4°92.9°
O2'C2'C3'H2'118.0°123.6°
O2'C2'C3'O3'20.4°20.4°
O2'C2'C3'C4'136.1°139.0°
O2'C2'C1'H1'36.5°36.6°
O2'C2'C3'H3'99.2°102.1°
C2'C3'O3'C4'111.9°114.8°
C2'C3'O3'H3'122.9°122.5°
C2'C3'C4'H3'122.1°118.7°
C2'C3'C4'O4'14.8°2.0°
C2'C3'C4'C5'133.3°121.4°
C3'C2'C1'H1'83.0°81.6°
C3'C2'O2'HO2'66.7°67.3°
C2'C3'O3'HO3'180.0°61.5°
C2'C3'C4'H4'105.3°117.4°
O3'C3'C4'H3'119.3°122.6°
O3'C3'C4'O4'133.4°120.7°
O3'C3'C4'C5'108.1°119.9°
O3'C3'C2'H2'138.4°144.0°
O3'C3'C4'H4'13.3°1.2°
C3'C4'O4'C5'109.3°119.4°
C3'C4'O4'H4'127.6°119.4°
C3'C4'C5'H4'127.2°121.1°
C3'C4'C5'O5'82.4°175.0°
C4'C3'C2'H2'105.9°97.3°
C4'C3'O3'HO3'68.1°176.3°
C3'C4'C5'H5'157.6°55.0°
C3'C4'C5'H5'A37.6°65.0°
O4'C4'C5'H4'121.3°121.1°
O4'C4'C5'O5'29.0°67.2°
C4'O4'C1'H1'65.1°78.5°
O4'C4'C3'H3'107.3°116.7°
O4'C4'C5'H5'90.9°172.8°
O4'C4'C5'H5'A149.1°52.8°
C4'C5'O5'H5'120.0°120.0°
C4'C5'O5'H5'A120.0°120.0°
C4'C5'O5'PAO153.3°180.0°
C5'C4'C3'H3'11.2°2.7°
C4'C5'H5'H5'A121.2°120.0°
C5'O5'PAOOAI172.3°55.0°
C5'O5'PAOOAN40.5°175.0°
C5'O5'PAOOAY65.3°64.9°
O5'C5'C4'H4'150.4°53.9°
O5'C5'H5'H5'A121.2°120.0°
O5'PAOOAIOAN121.1°120.0°
O5'PAOOAIOAY114.4°120.0°
O5'PAOOANPAM171.8°165.0°
O5'PAOOANOAY106.9°120.0°
PAOO5'C5'H5'86.7°60.0°
PAOO5'C5'H5'A33.3°60.0°
O5'PAOOAYHOAY117.0°60.0°
CABCAAHAAHAAA120.0°120.0°
CABCAAHAAHAAB120.0°120.0°
CABCAAHAAAHAAB120.0°120.1°
CAACABHABHABA120.2°119.9°
CAECADHADHADA119.5°120.0°
CADCAEHAEHAEA120.0°120.0°
CADCAEHAEHAEB120.0°120.0°
CADCAEHAEAHAEB120.0°120.0°
OAFPAKCALBRAG169.8°60.0°
OAFPAKOAJCAL116.5°120.0°
OAFPAKOAJOAV129.0°120.0°
OAFPAKCALOAV118.7°120.0°
OAFPAKCALPAM53.4°60.0°
OAFPAKCALBRAW69.5°180.0°
OAFPAKOAVHOAV129.1°60.0°
BRAGCALPAMOAH176.4°60.0°
BRAGCALPAKOAJ69.2°180.0°
BRAGCALPAKPAM116.4°120.0°
BRAGCALPAKBRAW120.7°120.0°
BRAGCALPAKOAV51.1°60.0°
BRAGCALPAMBRAW118.8°120.0°
BRAGCALPAMOAN56.8°60.0°
BRAGCALPAMOAX60.9°180.0°
OAHPAMCALPAK62.3°60.0°
OAHPAMCALOAN119.5°120.0°
OAHPAMCALOAX122.7°120.0°
OAHPAMCALBRAW57.6°180.0°
OAHPAMOANOAX129.6°120.0°
OAHPAMOANPAO0.3°60.0°
OAIPAOOANPAM65.6°45.0°
OAIPAOOANOAY130.5°120.0°
OAIPAOOAYHOAY0.0°180.0°
OAJPAKCALOAV120.3°120.0°
OAJPAKCALPAM174.4°60.0°
OAJPAKCALBRAW51.6°59.9°
OAJPAKOAFHOAF0.0°180.0°
OAJPAKOAVHOAV0.0°60.0°
PAKCALPAMBRAW119.9°120.0°
PAKCALPAMOAN178.2°180.0°
PAKCALPAMOAX60.5°60.0°
CALPAKOAFHOAF117.8°60.0°
CALPAKOAVHOAV116.9°180.0°
OAVPAKCALPAM65.3°180.0°
OAVPAKCALBRAW171.8°60.0°
OAVPAKOAFHOAF129.2°60.0°
CALPAMOANOAX118.2°120.0°
CALPAMOANPAO111.9°180.0°
CALPAMOAHHOAH122.5°60.1°
BRAWCALPAMOAN62.0°60.0°
BRAWCALPAMOAX179.7°60.0°
PAMOANPAOOAY64.9°75.0°
OANPAMOAHHOAH129.1°60.0°
OAXPAMOANPAO130.0°60.0°
OAXPAMOAHHOAH0.0°179.9°
OANPAOOAYHOAY134.9°60.0°
H1'C1'C2'H2'154.5°160.2°
H2'C2'O2'HO2'56.3°56.4°
H2'C2'C3'H3'18.8°21.5°
H3'C3'O3'HO3'57.1°61.0°
H3'C3'C4'H4'132.6°123.9°
H4'C4'C5'H5'30.4°66.1°
H4'C4'C5'H5'A89.6°173.9°
HAACAAHAAAHAAB120.0°119.9°
HAACAACABHAB60.0°174.8°
HAACAACABHABA60.0°65.2°
HAAACAACABHAB180.0°54.9°
HAAACAACABHABA60.0°174.8°
HAABCAACABHAB60.0°65.2°
HAABCAACABHABA180.0°54.7°
HADCADCAEHAE60.0°178.8°
HADCADCAEHAEA180.0°61.2°
HADCADCAEHAEB60.0°58.8°
HADACADCAEHAE60.0°58.8°
HADACADCAEHAEA60.0°178.9°
HADACADCAEHAEB180.0°61.1°
HAECAEHAEAHAEB119.9°120.0°

219869

PDB entries from 2024-05-15

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