Obsolete: AR4
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.45Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| CA | CB | sing | 1.53Å | 1.53Å | |
| CA | C | sing | 1.51Å | 1.53Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CB | CG | sing | 1.53Å | 1.54Å | |
| CB | HB2 | sing | 1.09Å | 1.10Å | |
| CB | HB3 | sing | 1.09Å | 1.10Å | |
| CG | CD | sing | 1.51Å | 1.52Å | |
| CG | HG2 | sing | 1.09Å | 1.10Å | |
| CG | HG3 | sing | 1.09Å | 1.10Å | |
| CD | OE1 | doub | 1.21Å | 1.25Å | |
| CD | OE2 | sing | 1.34Å | 1.28Å | |
| OE2 | C1' | sing | 1.45Å | 1.38Å | |
| C | O | doub | 1.21Å | 1.24Å | |
| C | OXT | sing | 1.34Å | 16.18Å | |
| O5' | C5' | sing | 1.43Å | 1.44Å | |
| O5' | H5' | sing | 0.97Å | 0.95Å | |
| C5' | C4' | sing | 1.53Å | 1.52Å | |
| C5' | H5'1 | sing | 1.09Å | 1.10Å | |
| C5' | H5'2 | sing | 1.09Å | 1.10Å | |
| C4' | O4' | sing | 1.43Å | 1.44Å | |
| C4' | C3' | sing | 1.54Å | 1.49Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| O4' | C1' | sing | 1.44Å | 1.43Å | |
| C1' | C2' | sing | 1.55Å | 1.52Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C2' | F2' | sing | 1.40Å | 1.39Å | |
| C2' | C3' | sing | 1.55Å | 1.52Å | |
| C2' | O2' | sing | 1.43Å | 21.31Å | |
| C3' | O3' | sing | 1.43Å | 1.25Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | H3'1 | sing | 0.97Å | 0.95Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| OXT | HO | sing | 0.97Å | 0.96Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | N | H | 109.5° | 111.0° |
| CA | N | H2 | 109.4° | 111.0° |
| N | CA | CB | 109.5° | 109.4° |
| N | CA | C | 113.2° | 109.5° |
| N | CA | HA | 107.7° | 109.5° |
| H | N | H2 | 109.5° | 111.0° |
| CB | CA | C | 112.5° | 109.4° |
| CB | CA | HA | 106.8° | 109.5° |
| CA | CB | CG | 111.3° | 109.4° |
| CA | CB | HB2 | 109.0° | 109.5° |
| CA | CB | HB3 | 109.0° | 109.5° |
| C | CA | HA | 106.8° | 109.5° |
| CA | C | O | 120.2° | 119.9° |
| CA | C | OXT | 100.8° | 120.0° |
| CG | CB | HB2 | 109.0° | 109.5° |
| CG | CB | HB3 | 109.0° | 109.4° |
| CB | CG | CD | 115.1° | 109.5° |
| CB | CG | HG2 | 108.1° | 109.5° |
| CB | CG | HG3 | 108.0° | 109.5° |
| HB2 | CB | HB3 | 109.5° | 109.5° |
| CD | CG | HG2 | 108.1° | 109.5° |
| CD | CG | HG3 | 108.1° | 109.4° |
| CG | CD | OE1 | 117.6° | 120.0° |
| CG | CD | OE2 | 114.5° | 120.0° |
| HG2 | CG | HG3 | 109.5° | 109.5° |
| OE1 | CD | OE2 | 127.9° | 120.0° |
| CD | OE2 | C1' | 117.5° | 117.0° |
| OE2 | C1' | O4' | 105.1° | 110.3° |
| OE2 | C1' | C2' | 110.0° | 110.3° |
| OE2 | C1' | H1' | 113.0° | 110.3° |
| O | C | OXT | 34.0° | 120.0° |
| C | OXT | HO | 109.5° | 117.0° |
| C5' | O5' | H5' | 109.5° | 114.0° |
| O5' | C5' | C4' | 110.3° | 109.5° |
| O5' | C5' | H5'1 | 109.3° | 109.5° |
| O5' | C5' | H5'2 | 109.2° | 109.5° |
| C4' | C5' | H5'1 | 109.2° | 109.4° |
| C4' | C5' | H5'2 | 109.3° | 109.4° |
| C5' | C4' | O4' | 116.4° | 109.8° |
| C5' | C4' | C3' | 114.4° | 109.8° |
| C5' | C4' | H4' | 107.3° | 109.8° |
| H5'1 | C5' | H5'2 | 109.5° | 109.5° |
| O4' | C4' | C3' | 102.5° | 107.6° |
| O4' | C4' | H4' | 108.3° | 109.8° |
| C4' | O4' | C1' | 111.1° | 109.9° |
| C3' | C4' | H4' | 107.7° | 109.9° |
| C4' | C3' | C2' | 109.4° | 102.2° |
| C4' | C3' | O3' | 106.9° | 110.8° |
| C4' | C3' | H3' | 110.2° | 110.8° |
| O4' | C1' | C2' | 105.6° | 105.1° |
| O4' | C1' | H1' | 112.0° | 110.3° |
| C2' | C1' | H1' | 110.8° | 110.4° |
| C1' | C2' | F2' | 110.1° | 111.1° |
| C1' | C2' | C3' | 103.4° | 101.0° |
| C1' | C2' | O2' | 66.1° | 111.2° |
| F2' | C2' | C3' | 110.1° | 111.1° |
| F2' | C2' | O2' | 109.4° | 111.0° |
| C3' | C2' | O2' | 140.3° | 111.2° |
| C2' | C3' | O3' | 106.2° | 110.9° |
| C2' | C3' | H3' | 109.8° | 110.9° |
| C2' | O2' | HO2' | 66.1° | 114.0° |
| O3' | C3' | H3' | 114.2° | 110.9° |
| C3' | O3' | H3'1 | 109.5° | 114.1° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | N | H | H2 | 120.0° | 124.0° |
| N | CA | CB | C | 126.8° | 120.0° |
| N | CA | CB | HA | 116.3° | 120.0° |
| N | CA | C | HA | 118.3° | 120.1° |
| N | CA | CB | CG | 63.0° | 65.0° |
| N | CA | CB | HB2 | 57.2° | 54.9° |
| N | CA | CB | HB3 | 176.7° | 175.0° |
| N | CA | C | O | 140.7° | 19.9° |
| N | CA | C | OXT | 110.7° | 160.0° |
| H | N | CA | CB | 180.0° | 60.0° |
| H | N | CA | C | 53.5° | 59.9° |
| H | N | CA | HA | 64.3° | 180.0° |
| H2 | N | CA | CB | 60.0° | 64.0° |
| H2 | N | CA | C | 66.5° | 176.1° |
| H2 | N | CA | HA | 175.7° | 56.0° |
| CB | CA | C | HA | 116.8° | 120.0° |
| CA | CB | CG | HB2 | 120.3° | 120.0° |
| CA | CB | CG | HB3 | 120.3° | 119.9° |
| CA | CB | HB2 | HB3 | 119.2° | 120.0° |
| CA | CB | CG | CD | 162.7° | 180.0° |
| CA | CB | CG | HG2 | 76.5° | 60.0° |
| CA | CB | CG | HG3 | 41.9° | 60.0° |
| CB | CA | C | O | 94.4° | 100.0° |
| CB | CA | C | OXT | 124.4° | 80.0° |
| C | CA | CB | CG | 170.1° | 175.0° |
| C | CA | CB | HB2 | 69.6° | 65.1° |
| C | CA | CB | HB3 | 49.9° | 55.0° |
| CA | C | O | OXT | 61.5° | 180.0° |
| CA | C | OXT | HO | 103.7° | 180.0° |
| HA | CA | CB | CG | 53.3° | 55.0° |
| HA | CA | CB | HB2 | 173.6° | 175.0° |
| HA | CA | CB | HB3 | 66.9° | 65.0° |
| HA | CA | C | O | 22.4° | 140.0° |
| HA | CA | C | OXT | 7.6° | 39.9° |
| CG | CB | HB2 | HB3 | 119.2° | 120.0° |
| CB | CG | CD | HG2 | 120.8° | 120.1° |
| CB | CG | CD | HG3 | 120.8° | 120.0° |
| CB | CG | HG2 | HG3 | 117.4° | 120.0° |
| CB | CG | CD | OE1 | 6.6° | 0.1° |
| CB | CG | CD | OE2 | 170.9° | 180.0° |
| HB2 | CB | CG | CD | 42.4° | 60.0° |
| HB2 | CB | CG | HG2 | 163.2° | 180.0° |
| HB2 | CB | CG | HG3 | 78.4° | 60.0° |
| HB3 | CB | CG | CD | 77.1° | 60.1° |
| HB3 | CB | CG | HG2 | 43.8° | 60.0° |
| HB3 | CB | CG | HG3 | 162.1° | 180.0° |
| CD | CG | HG2 | HG3 | 117.5° | 119.9° |
| CG | CD | OE1 | OE2 | 177.0° | 179.9° |
| CG | CD | OE2 | C1' | 155.8° | 180.0° |
| HG2 | CG | CD | OE1 | 127.4° | 120.0° |
| HG2 | CG | CD | OE2 | 50.0° | 60.0° |
| HG3 | CG | CD | OE1 | 114.3° | 120.1° |
| HG3 | CG | CD | OE2 | 68.3° | 60.0° |
| OE1 | CD | OE2 | C1' | 27.1° | 0.0° |
| CD | OE2 | C1' | O4' | 38.9° | 71.4° |
| CD | OE2 | C1' | C2' | 74.3° | 172.9° |
| CD | OE2 | C1' | H1' | 161.4° | 50.6° |
| OE2 | C1' | O4' | C4' | 143.6° | 143.3° |
| OE2 | C1' | O4' | C2' | 116.3° | 118.9° |
| OE2 | C1' | O4' | H1' | 123.0° | 122.0° |
| OE2 | C1' | C2' | H1' | 125.6° | 122.1° |
| OE2 | C1' | C2' | F2' | 116.3° | 86.7° |
| OE2 | C1' | C2' | C3' | 126.0° | 155.4° |
| OE2 | C1' | C2' | O2' | 13.4° | 37.4° |
| O | C | OXT | HO | 127.0° | 0.0° |
| O5' | C5' | C4' | H5'1 | 120.1° | 120.0° |
| O5' | C5' | C4' | H5'2 | 120.1° | 120.0° |
| O5' | C5' | H5'1 | H5'2 | 119.6° | 120.1° |
| O5' | C5' | C4' | O4' | 65.4° | 66.4° |
| O5' | C5' | C4' | C3' | 175.3° | 175.4° |
| O5' | C5' | C4' | H4' | 56.0° | 54.4° |
| H5' | O5' | C5' | C4' | 180.0° | 180.0° |
| H5' | O5' | C5' | H5'1 | 59.9° | 60.0° |
| H5' | O5' | C5' | H5'2 | 59.9° | 60.1° |
| C4' | C5' | H5'1 | H5'2 | 119.6° | 119.9° |
| C5' | C4' | O4' | C3' | 125.6° | 119.5° |
| C5' | C4' | O4' | H4' | 120.8° | 120.9° |
| C5' | C4' | C3' | H4' | 119.1° | 121.0° |
| C5' | C4' | O4' | C1' | 96.5° | 117.8° |
| C5' | C4' | C3' | C2' | 107.4° | 140.9° |
| C5' | C4' | C3' | O3' | 138.1° | 100.9° |
| C5' | C4' | C3' | H3' | 13.5° | 22.7° |
| H5'1 | C5' | C4' | O4' | 54.8° | 53.6° |
| H5'1 | C5' | C4' | C3' | 64.6° | 64.5° |
| H5'1 | C5' | C4' | H4' | 176.1° | 174.4° |
| H5'2 | C5' | C4' | O4' | 174.5° | 173.5° |
| H5'2 | C5' | C4' | C3' | 55.2° | 55.4° |
| H5'2 | C5' | C4' | H4' | 64.1° | 65.6° |
| O4' | C4' | C3' | H4' | 114.0° | 119.5° |
| C4' | O4' | C1' | C2' | 27.3° | 24.5° |
| C4' | O4' | C1' | H1' | 93.3° | 94.6° |
| O4' | C4' | C3' | C2' | 19.5° | 21.4° |
| O4' | C4' | C3' | O3' | 95.1° | 139.5° |
| O4' | C4' | C3' | H3' | 140.3° | 96.9° |
| C3' | C4' | O4' | C1' | 29.1° | 1.7° |
| C4' | C3' | C2' | C1' | 4.1° | 34.2° |
| C4' | C3' | C2' | F2' | 113.5° | 152.1° |
| C4' | C3' | C2' | O3' | 115.0° | 118.2° |
| C4' | C3' | C2' | H3' | 121.1° | 118.2° |
| C4' | C3' | C2' | O2' | 72.6° | 83.8° |
| C4' | C3' | O3' | H3' | 122.1° | 123.5° |
| C4' | C3' | O3' | H3'1 | 67.1° | 180.0° |
| H4' | C4' | O4' | C1' | 142.7° | 121.3° |
| H4' | C4' | C3' | C2' | 133.5° | 98.2° |
| H4' | C4' | C3' | O3' | 18.9° | 20.0° |
| H4' | C4' | C3' | H3' | 105.7° | 143.6° |
| O4' | C1' | C2' | H1' | 121.5° | 119.0° |
| O4' | C1' | C2' | F2' | 130.8° | 154.4° |
| O4' | C1' | C2' | C3' | 13.1° | 36.5° |
| O4' | C1' | C2' | O2' | 126.3° | 81.5° |
| C1' | C2' | F2' | C3' | 113.4° | 111.5° |
| C1' | C2' | F2' | O2' | 70.8° | 124.2° |
| C1' | C2' | C3' | O2' | 68.5° | 118.0° |
| C1' | C2' | C3' | O3' | 110.9° | 152.3° |
| C1' | C2' | C3' | H3' | 125.2° | 84.0° |
| C1' | C2' | O2' | HO2' | 180.0° | 61.4° |
| H1' | C1' | C2' | F2' | 9.3° | 35.4° |
| H1' | C1' | C2' | C3' | 108.4° | 82.5° |
| H1' | C1' | C2' | O2' | 112.2° | 159.5° |
| F2' | C2' | C3' | O2' | 173.8° | 124.1° |
| F2' | C2' | C3' | O3' | 131.5° | 89.8° |
| F2' | C2' | C3' | H3' | 7.5° | 33.9° |
| F2' | C2' | O2' | HO2' | 75.9° | 62.8° |
| C2' | C3' | O3' | H3' | 121.1° | 123.6° |
| C2' | C3' | O3' | H3'1 | 49.6° | 67.2° |
| C3' | C2' | O2' | HO2' | 97.9° | 173.0° |
| O2' | C2' | C3' | O3' | 42.4° | 34.3° |
| O2' | C2' | C3' | H3' | 166.3° | 158.0° |
| H3' | C3' | O3' | H3'1 | 170.8° | 56.4° |
