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APU

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
PAO1Adoub1.48Å1.50Å
PAO2Asing1.61Å1.49Å
PAO3Bsing1.61Å1.67Å
PAO5Dsing1.61Å1.61Å
O2AHOA2sing0.97Å0.95Å
O5BC5Bsing1.43Å1.39Å
O5BHO5Asing0.97Å0.95Å
C5BC4Bsing1.53Å1.53Å
C5BH51Asing1.09Å1.12Å
C5BH52Asing1.09Å1.11Å
C4BO4Bsing1.44Å1.44Å
C4BC3Bsing1.54Å1.53Å
C4BH4Bsing1.09Å1.11Å
O4BC1Bsing1.44Å1.41Å
C3BO3Bsing1.43Å1.47Å
C3BC2Bsing1.55Å1.54Å
C3BH3Bsing1.09Å1.12Å
C2BO2Bsing1.43Å1.46Å
C2BC1Bsing1.54Å1.51Å
C2BH2Bsing1.09Å1.12Å
O2BHO2Asing0.97Å0.95Å
C1BN9Asing1.46Å1.47Å
C1BH1Bsing1.09Å1.11Å
N9AC8Asing1.36Å1.39ÅAromatic
N9AC4Asing1.37Å1.40ÅAromatic
C8AN7Adoub1.30Å1.30ÅAromatic
C8AH8Asing1.08Å1.10Å
N7AC5Asing1.35Å1.40ÅAromatic
C5AC6Asing1.40Å1.42ÅAromatic
C5AC4Adoub1.40Å1.37ÅAromatic
C6AN6Asing1.38Å1.34Å
C6AN1Adoub1.33Å1.37ÅAromatic
N6AH61Asing0.97Å1.02Å
N6AH62Asing0.97Å1.02Å
N1AC2Asing1.32Å1.30ÅAromatic
C2AN3Adoub1.32Å1.34ÅAromatic
C2AH2Asing1.08Å1.10Å
N3AC4Asing1.33Å1.38ÅAromatic
N1UC2Using1.35Å1.36Å
N1UC6Using1.37Å1.40Å
N1UC1Dsing1.46Å1.49Å
C2UO2Udoub1.22Å1.22Å
C2UN3Using1.35Å1.41Å
N3UC4Using1.35Å1.39Å
N3UH3Using0.97Å1.02Å
C4UO4Udoub1.22Å1.24Å
C4UC5Using1.41Å1.45Å
C5UC6Udoub1.35Å1.35Å
C5UH5Using1.08Å1.10Å
C6UH6Using1.08Å1.10Å
C1DC2Dsing1.55Å1.47Å
C1DO4Dsing1.44Å1.42Å
C1DH1Dsing1.09Å1.12Å
C2DO2Dsing1.43Å1.40Å
C2DC3Dsing1.55Å1.50Å
C2DH2Dsing1.09Å1.12Å
O2DHO2'sing0.97Å0.95Å
C3DO3Dsing1.43Å1.45Å
C3DC4Dsing1.54Å1.53Å
C3DH3Dsing1.09Å1.11Å
O3DPUsing1.61Å1.64Å
C4DO4Dsing1.44Å1.45Å
C4DC5Dsing1.53Å1.57Å
C4DH4Dsing1.09Å1.11Å
O5DC5Dsing1.43Å1.41Å
C5DH51Using1.09Å1.11Å
C5DH52Using1.09Å1.11Å
PUO1Xdoub1.48Å1.56Å
PUO2Xsing1.61Å1.47Å
PUO3Xsing1.61Å1.51Å
O2XHO2Using0.97Å0.95Å
O3XHO3Using0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1APAO2A117.2°109.5°
O1APAO3B112.8°109.5°
O1APAO5D108.2°109.4°
O2APAO3B110.4°109.5°
O2APAO5D110.2°109.4°
PAO2AHOA2117.2°106.8°
O3BPAO5D95.8°109.5°
PAO3BC3B128.3°106.8°
PAO5DC5D125.1°106.8°
C5BO5BHO5A109.6°106.8°
O5BC5BC4B109.6°109.5°
O5BC5BH51A112.2°109.5°
O5BC5BH52A112.1°109.5°
C4BC5BH51A112.2°109.5°
C4BC5BH52A112.2°109.4°
C5BC4BO4B109.8°110.4°
C5BC4BC3B120.8°110.5°
C5BC4BH4B100.0°110.3°
H51AC5BH52A98.2°109.5°
O4BC4BC3B106.7°104.8°
O4BC4BH4B116.1°110.4°
C4BO4BC1B110.4°105.3°
C3BC4BH4B103.7°110.4°
C4BC3BO3B112.1°110.6°
C4BC3BC2B98.5°104.1°
C4BC3BH3B114.4°110.5°
O4BC1BC2B100.0°104.9°
O4BC1BN9A106.0°110.4°
O4BC1BH1B118.7°110.3°
O3BC3BC2B108.3°110.5°
O3BC3BH3B105.7°110.5°
C2BC3BH3B117.9°110.6°
C3BC2BO2B115.8°110.5°
C3BC2BC1B102.9°104.0°
C3BC2BH2B110.7°110.5°
O2BC2BC1B112.1°110.8°
O2BC2BH2B101.2°110.5°
C2BO2BHO2A115.8°106.8°
C1BC2BH2B114.5°110.4°
C2BC1BN9A113.1°110.4°
C2BC1BH1B112.2°110.4°
N9AC1BH1B106.8°110.3°
C1BN9AC8A126.4°126.2°
C1BN9AC4A127.7°126.4°
C8AN9AC4A105.8°107.4°
N9AC8AN7A112.7°110.0°
N9AC8AH8A126.5°125.0°
N9AC4AC5A105.6°106.1°
N9AC4AN3A129.4°134.8°
N7AC8AH8A120.8°125.0°
C8AN7AC5A105.7°109.4°
N7AC5AC6A133.3°134.7°
N7AC5AC4A110.2°107.1°
C6AC5AC4A116.3°118.2°
C5AC6AN6A121.1°120.7°
C5AC6AN1A118.7°118.5°
C5AC4AN3A125.0°119.1°
N6AC6AN1A120.2°120.8°
C6AN6AH61A121.1°120.0°
C6AN6AH62A108.1°120.1°
C6AN1AC2A119.3°121.2°
H61AN6AH62A108.0°119.9°
N1AC2AN3A127.9°122.5°
N1AC2AH2A114.4°118.8°
N3AC2AH2A117.7°118.8°
C2AN3AC4A112.4°120.6°
C2UN1UC6U119.0°120.6°
C2UN1UC1D114.0°119.7°
N1UC2UO2U120.1°119.5°
N1UC2UN3U117.8°120.9°
C6UN1UC1D126.6°119.7°
N1UC6UC5U122.4°119.7°
N1UC6UH6U120.5°120.2°
N1UC1DC2D116.8°110.8°
N1UC1DO4D107.3°110.6°
N1UC1DH1D104.4°110.5°
O2UC2UN3U122.1°119.5°
C2UN3UC4U126.6°120.3°
C2UN3UH3U117.4°119.9°
C4UN3UH3U116.0°119.8°
N3UC4UO4U120.0°120.3°
N3UC4UC5U111.9°119.4°
O4UC4UC5U128.1°120.3°
C4UC5UC6U122.3°119.1°
C4UC5UH5U122.4°120.5°
C6UC5UH5U115.3°120.4°
C5UC6UH6U117.1°120.2°
C2DC1DO4D103.5°103.5°
C2DC1DH1D108.0°110.6°
C1DC2DO2D112.9°110.9°
C1DC2DC3D105.3°102.1°
C1DC2DH2D109.5°110.9°
O4DC1DH1D117.5°110.6°
C1DO4DC4D110.9°106.9°
O2DC2DC3D108.1°110.9°
O2DC2DH2D106.8°110.7°
C2DO2DHO2'113.0°106.8°
C3DC2DH2D114.2°111.0°
C2DC3DO3D115.7°110.5°
C2DC3DC4D102.7°104.0°
C2DC3DH3D110.2°110.5°
O3DC3DC4D110.2°110.8°
O3DC3DH3D102.7°110.4°
C3DO3DPU124.4°106.8°
C4DC3DH3D115.7°110.5°
C3DC4DO4D104.7°107.4°
C3DC4DC5D114.3°109.9°
C3DC4DH4D111.0°109.9°
O3DPUO1X104.5°109.5°
O3DPUO2X105.9°109.5°
O3DPUO3X108.1°109.5°
O4DC4DC5D113.5°109.8°
O4DC4DH4D111.8°109.9°
C5DC4DH4D101.8°109.9°
C4DC5DO5D107.8°109.5°
C4DC5DH51U112.8°109.5°
C4DC5DH52U112.8°109.4°
O5DC5DH51U112.9°109.5°
O5DC5DH52U112.8°109.4°
H51UC5DH52U97.6°109.5°
O1XPUO2X99.8°109.4°
O1XPUO3X117.3°109.5°
O2XPUO3X119.7°109.4°
PUO2XHO2U105.9°106.9°
PUO3XHO3U108.2°106.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1APAO2AO3B131.1°120.0°
O1APAO2AO5D124.4°120.0°
O1APAO3BO5D112.6°120.0°
O1APAO2AHOA2180.0°180.0°
O1APAO3BC3B160.1°60.0°
O1APAO5DC5D68.8°60.0°
O2APAO3BO5D114.1°119.9°
O2APAO3BC3B26.8°60.1°
O2APAO5DC5D60.6°60.0°
O3BPAO2AHOA249.0°59.9°
PAO3BC3BC4B49.9°121.5°
PAO3BC3BC2B157.5°123.9°
PAO3BC3BH3B75.3°1.2°
O3BPAO5DC5D174.8°180.0°
O5DPAO2AHOA255.6°60.0°
O5DPAO3BC3B87.3°180.0°
PAO5DC5DC4D132.7°180.0°
PAO5DC5DH51U102.0°60.0°
PAO5DC5DH52U7.5°60.1°
O5BC5BC4BH51A125.2°120.0°
O5BC5BC4BH52A125.2°120.0°
O5BC5BH51AH52A118.0°120.0°
O5BC5BC4BO4B65.4°61.4°
O5BC5BC4BC3B59.4°176.9°
O5BC5BC4BH4B172.0°60.8°
HO5AO5BC5BC4B180.0°180.0°
HO5AO5BC5BH51A54.7°60.0°
HO5AO5BC5BH52A54.7°60.0°
C4BC5BH51AH52A118.2°119.9°
C5BC4BO4BC3B132.5°119.0°
C5BC4BO4BH4B112.5°122.2°
C5BC4BC3BH4B110.7°122.2°
C5BC4BO4BC1B140.9°159.5°
C5BC4BC3BO3B140.2°98.4°
C5BC4BC3BC2B106.0°143.0°
C5BC4BC3BH3B19.9°24.2°
H51AC5BC4BO4B169.4°178.5°
H51AC5BC4BC3B65.9°63.0°
H51AC5BC4BH4B46.8°59.2°
H52AC5BC4BO4B59.9°58.6°
H52AC5BC4BC3B175.4°56.9°
H52AC5BC4BH4B62.7°179.2°
O4BC4BC3BH4B123.1°118.9°
O4BC4BC3BO3B93.6°142.7°
O4BC4BC3BC2B20.2°24.1°
O4BC4BC3BH3B146.1°94.7°
C4BO4BC1BC2B33.7°40.4°
C4BO4BC1BN9A151.5°159.4°
C4BO4BC1BH1B88.6°78.5°
C3BC4BO4BC1B8.3°40.5°
C4BC3BO3BC2B107.6°114.7°
C4BC3BO3BH3B125.2°122.6°
C4BC3BC2BH3B123.5°118.7°
C4BC3BC2BO2B162.9°118.8°
C4BC3BC2BC1B40.2°0.1°
C4BC3BC2BH2B82.6°118.6°
H4BC4BO4BC1B106.6°78.4°
H4BC4BC3BO3B29.5°23.8°
H4BC4BC3BC2B143.2°94.8°
H4BC4BC3BH3B90.8°146.4°
O4BC1BC2BC3B46.1°23.8°
O4BC1BC2BO2B171.2°142.6°
O4BC1BC2BN9A112.3°118.9°
O4BC1BC2BH1B126.8°118.8°
O4BC1BC2BH2B74.2°94.7°
O4BC1BN9AH1B127.5°122.2°
O4BC1BN9AC8A131.4°27.1°
O4BC1BN9AC4A47.8°153.0°
O3BC3BC2BH3B119.7°122.6°
O3BC3BC2BO2B46.1°0.1°
O3BC3BC2BC1B76.6°118.8°
O3BC3BC2BH2B160.6°122.7°
C3BC2BO2BC1B117.7°114.7°
C3BC2BO2BH2B119.8°122.6°
C3BC2BC1BH2B120.2°118.6°
C3BC2BO2BHO2A179.9°180.0°
C3BC2BC1BN9A158.4°142.8°
C3BC2BC1BH1B80.7°95.0°
H3BC3BC2BO2B73.6°122.5°
H3BC3BC2BC1B163.6°118.5°
H3BC3BC2BH2B40.9°0.0°
O2BC2BC1BH2B114.6°122.7°
O2BC2BC1BN9A76.4°98.5°
O2BC2BC1BH1B44.4°23.7°
C1BC2BO2BHO2A62.4°65.3°
C2BC1BN9AH1B123.9°122.3°
C2BC1BN9AC8A119.9°88.4°
C2BC1BN9AC4A60.8°91.5°
H2BC2BO2BHO2A60.1°57.4°
H2BC2BC1BN9A38.2°24.2°
H2BC2BC1BH1B159.1°146.4°
C1BN9AC8AC4A179.4°179.9°
C1BN9AC8AN7A179.0°179.9°
C1BN9AC8AH8A0.9°0.1°
C1BN9AC4AC5A179.1°179.7°
C1BN9AC4AN3A0.8°0.1°
H1BC1BN9AC8A4.0°149.3°
H1BC1BN9AC4A175.3°30.8°
N9AC8AN7AH8A180.0°180.0°
N9AC8AN7AC5A0.9°0.2°
C8AN9AC4AC5A1.5°0.2°
C8AN9AC4AN3A178.6°180.0°
C4AN9AC8AN7A1.6°0.0°
C4AN9AC8AH8A178.5°180.0°
N9AC4AC5AN7A1.0°0.3°
N9AC4AC5AC6A175.1°179.6°
N9AC4AC5AN3A179.9°179.9°
N9AC4AN3AC2A179.4°180.0°
C8AN7AC5AC6A175.1°179.5°
C8AN7AC5AC4A0.1°0.4°
H8AC8AN7AC5A179.1°179.8°
N7AC5AC6AC4A175.0°179.1°
N7AC5AC6AN6A1.8°0.7°
N7AC5AC6AN1A179.9°179.6°
N7AC5AC4AN3A179.0°179.8°
C5AC6AN6AN1A178.3°179.7°
C5AC6AN6AH61A180.0°179.7°
C5AC6AN6AH62A54.7°0.5°
C5AC6AN1AC2A1.3°0.3°
C6AC5AC4AN3A4.8°0.5°
C4AC5AC6AN6A173.2°179.7°
C4AC5AC6AN1A5.2°0.5°
C5AC4AN3AC2A0.4°0.2°
C6AN6AH61AH62A125.2°179.8°
N6AC6AN1AC2A177.0°180.0°
N1AC6AN6AH61A1.7°0.0°
N1AC6AN6AH62A127.0°179.7°
C6AN1AC2AN3A3.8°0.0°
C6AN1AC2AH2A176.2°180.0°
N1AC2AN3AH2A180.0°180.0°
N1AC2AN3AC4A4.2°0.0°
H2AC2AN3AC4A175.8°180.0°
C2UN1UC6UC1D172.2°179.8°
N1UC2UO2UN3U178.0°179.5°
N1UC2UN3UC4U0.6°0.5°
N1UC2UN3UH3U179.4°179.7°
C2UN1UC6UC5U2.6°0.2°
C2UN1UC6UH6U177.3°179.8°
C2UN1UC1DC2D126.6°55.9°
C2UN1UC1DO4D117.9°58.3°
C2UN1UC1DH1D7.4°178.9°
C6UN1UC2UO2U180.0°180.0°
C6UN1UC2UN3U2.0°0.5°
N1UC6UC5UC4U0.7°0.0°
N1UC6UC5UH6U180.0°180.0°
N1UC6UC5UH5U179.3°180.0°
C6UN1UC1DC2D60.9°124.4°
C6UN1UC1DO4D54.6°121.5°
C6UN1UC1DH1D179.9°1.4°
C1DN1UC2UO2U6.9°0.2°
C1DN1UC2UN3U171.1°179.8°
C1DN1UC6UC5U169.6°180.0°
C1DN1UC6UH6U10.5°0.0°
N1UC1DC2DO4D117.6°118.6°
N1UC1DC2DH1D117.2°123.0°
N1UC1DO4DH1D117.0°122.8°
N1UC1DC2DO2D88.6°86.1°
N1UC1DC2DC3D153.6°155.7°
N1UC1DC2DH2D30.2°37.3°
N1UC1DO4DC4D149.9°158.8°
O2UC2UN3UC4U177.5°180.0°
O2UC2UN3UH3U2.6°0.2°
C2UN3UC4UH3U179.9°179.8°
C2UN3UC4UO4U175.7°179.7°
C2UN3UC4UC5U2.3°0.3°
N3UC4UO4UC5U177.7°180.0°
N3UC4UC5UC6U1.6°0.1°
N3UC4UC5UH5U178.3°180.0°
H3UN3UC4UO4U4.3°0.0°
H3UN3UC4UC5U177.6°180.0°
O4UC4UC5UC6U176.2°180.0°
O4UC4UC5UH5U3.8°0.0°
C4UC5UC6UH5U180.0°179.9°
C4UC5UC6UH6U179.3°180.0°
H5UC5UC6UH6U0.7°0.0°
C2DC1DO4DH1D118.9°118.5°
C1DC2DO2DC3D116.1°112.8°
C1DC2DO2DH2D120.5°123.6°
C1DC2DC3DH2D120.3°118.3°
C1DC2DO2DHO2'180.0°61.4°
C1DC2DC3DO3D88.0°98.0°
C1DC2DC3DC4D32.2°21.0°
C1DC2DC3DH3D156.1°139.6°
C2DC1DO4DC4D25.9°40.1°
O4DC1DC2DO2D153.8°155.3°
O4DC1DC2DC3D36.0°37.1°
O4DC1DC2DH2D87.4°81.2°
C1DO4DC4DC3D5.7°26.5°
C1DO4DC4DC5D130.9°145.9°
C1DO4DC4DH4D114.6°93.0°
H1DC1DC2DO2D28.5°36.8°
H1DC1DC2DC3D89.3°81.4°
H1DC1DC2DH2D147.4°160.3°
H1DC1DO4DC4D93.1°78.4°
O2DC2DC3DH2D118.8°123.5°
O2DC2DC3DO3D33.0°20.3°
O2DC2DC3DC4D153.2°139.2°
O2DC2DC3DH3D83.0°102.2°
C3DC2DO2DHO2'63.9°174.1°
C2DC3DO3DC4D116.0°114.7°
C2DC3DO3DH3D120.1°122.5°
C2DC3DC4DH3D120.1°118.6°
C2DC3DO3DPU153.2°121.5°
C2DC3DC4DO4D16.3°2.0°
C2DC3DC4DC5D108.4°121.4°
C2DC3DC4DH4D137.2°117.6°
H2DC2DO2DHO2'59.5°62.2°
H2DC2DC3DO3D151.8°143.8°
H2DC2DC3DC4D88.1°97.3°
H2DC2DC3DH3D35.8°21.3°
O3DC3DC4DH3D116.0°122.7°
O3DC3DC4DO4D107.5°120.7°
O3DC3DC4DC5D127.8°119.9°
O3DC3DC4DH4D13.4°1.1°
C3DO3DPUO1X33.0°60.0°
C3DO3DPUO2X71.9°180.0°
C3DO3DPUO3X158.7°60.0°
C4DC3DO3DPU90.8°123.8°
C3DC4DO4DC5D125.2°119.5°
C3DC4DO4DH4D120.3°119.5°
C3DC4DC5DH4D119.7°121.0°
C3DC4DC5DO5D56.6°179.7°
C3DC4DC5DH51U178.1°59.7°
C3DC4DC5DH52U68.6°60.4°
H3DC3DO3DPU33.1°1.0°
H3DC3DC4DO4D136.5°116.6°
H3DC3DC4DC5D11.7°2.8°
H3DC3DC4DH4D102.7°123.8°
O3DPUO1XO2X109.3°120.1°
O3DPUO1XO3X119.7°120.0°
O3DPUO2XO3X122.3°120.0°
O3DPUO2XHO2U180.0°180.0°
O3DPUO3XHO3U179.9°60.0°
O4DC4DC5DH4D120.3°121.0°
O4DC4DC5DO5D63.3°61.8°
O4DC4DC5DH51U61.9°58.3°
O4DC4DC5DH52U171.4°178.3°
C4DC5DO5DH51U125.2°120.1°
C4DC5DO5DH52U125.2°119.9°
C4DC5DH51UH52U118.8°120.0°
H4DC4DC5DO5D176.3°59.3°
H4DC4DC5DH51U58.4°179.3°
H4DC4DC5DH52U51.1°60.6°
O5DC5DH51UH52U118.8°120.0°
O1XPUO2XO3X129.4°120.0°
O1XPUO2XHO2U71.7°60.0°
O1XPUO3XHO3U62.2°180.0°
O2XPUO3XHO3U58.8°60.1°
O3XPUO2XHO2U57.6°60.0°

219869

PDB entries from 2024-05-15

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