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APG

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2doub1.38Å1.41ÅAromatic
C1C6sing1.38Å1.40ÅAromatic
C1H1sing1.08Å1.10Å
C2C3sing1.38Å1.39ÅAromatic
C2H2sing1.08Å1.10Å
C3C4doub1.38Å1.40ÅAromatic
C3C12sing1.51Å1.55Å
C4C5sing1.38Å1.40ÅAromatic
C4H4sing1.08Å1.10Å
C5C6doub1.38Å1.39ÅAromatic
C5H5sing1.08Å1.10Å
C6H6sing1.08Å1.10Å
C12O17sing1.43Å1.43Å
C12C13sing1.51Å1.55Å
C12C14sing1.53Å1.54Å
O17HO17sing0.97Å0.95Å
C13O14doub1.21Å1.23Å
C13O15sing1.34Å1.23Å
C14H141sing1.09Å1.12Å
C14H142sing1.09Å1.11Å
C14H143sing1.09Å1.11Å
O15HO15sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C6119.7°120.0°
C2C1H1120.4°120.0°
C1C2C3120.5°120.0°
C1C2H2120.2°120.0°
C6C1H1119.9°120.0°
C1C6C5119.9°120.0°
C1C6H6120.1°120.0°
C3C2H2119.3°120.0°
C2C3C4119.5°120.0°
C2C3C12118.0°120.0°
C4C3C12122.4°120.0°
C3C4C5120.0°120.0°
C3C4H4120.3°120.0°
C3C12O17115.2°109.5°
C3C12C13116.1°109.5°
C3C12C1499.5°109.5°
C5C4H4119.7°120.0°
C4C5C6120.4°120.0°
C4C5H5119.8°120.0°
C6C5H5119.7°120.0°
C5C6H6120.0°120.0°
O17C12C13110.1°109.4°
O17C12C14108.9°109.4°
C12O17HO17115.3°106.8°
C13C12C14105.8°109.5°
C12C13O14121.3°120.1°
C12C13O15117.6°120.0°
C12C14H14199.5°109.4°
C12C14H142116.0°109.5°
C12C14H143116.1°109.5°
O14C13O15121.0°119.9°
C13O15HO15117.7°120.1°
H141C14H142116.0°109.5°
H141C14H143116.1°109.4°
H142C14H14394.4°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C6H1180.0°180.0°
C1C2C3H2180.0°179.9°
C1C2C3C40.4°0.2°
C1C2C3C12176.1°180.0°
C2C1C6C50.1°0.1°
C2C1C6H6179.9°180.0°
C6C1C2C30.3°0.0°
C6C1C2H2179.7°180.0°
C1C6C5C40.0°0.1°
C1C6C5H6180.0°179.9°
C1C6C5H5180.0°180.0°
H1C1C2C3179.7°180.0°
H1C1C2H20.4°0.0°
H1C1C6C5179.8°179.9°
H1C1C6H60.2°0.0°
C2C3C4C12175.6°179.8°
C2C3C4C50.3°0.4°
C2C3C4H4179.8°180.0°
C2C3C12O1712.2°29.9°
C2C3C12C13143.1°90.0°
C2C3C12C14104.0°149.9°
H2C2C3C4179.6°179.7°
H2C2C3C123.8°0.1°
C3C4C5H4180.0°179.5°
C3C4C5C60.1°0.4°
C3C4C5H5179.9°179.7°
C4C3C12O17172.1°150.3°
C4C3C12C1341.3°89.8°
C4C3C12C1471.6°30.3°
C12C3C4C5175.8°179.8°
C12C3C4H44.2°0.2°
C3C12O17C13133.7°120.0°
C3C12O17C14110.8°120.0°
C3C12C13C14109.3°120.1°
C3C12O17HO17180.0°60.0°
C3C12C13O1445.4°120.0°
C3C12C13O15137.1°60.1°
C3C12C14H141180.0°60.0°
C3C12C14H14254.8°180.0°
C3C12C14H14354.7°60.0°
C4C5C6H5180.0°179.9°
C4C5C6H6180.0°179.8°
H4C4C5C6179.9°179.9°
H4C4C5H50.1°0.2°
H5C5C6H60.0°0.1°
O17C12C13C14117.5°119.9°
O17C12C13O14178.7°0.0°
O17C12C13O153.9°180.0°
O17C12C14H14159.0°180.0°
O17C12C14H14266.2°60.0°
O17C12C14H143175.7°60.1°
C13C12O17HO1746.3°60.0°
C12C13O14O15177.3°179.9°
C13C12C14H14159.3°60.1°
C13C12C14H142175.6°60.0°
C13C12C14H14366.0°180.0°
C12C13O15HO15180.0°180.0°
C14C12O17HO1769.2°180.0°
C14C12C13O1463.8°119.9°
C14C12C13O15113.6°60.0°
C12C14H141H142125.2°120.1°
C12C14H141H143125.3°120.0°
C12C14H142H143121.9°120.1°
O14C13O15HO152.6°0.1°
H141C14H142H143121.9°119.9°

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PDB entries from 2024-07-10

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