ANZ
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
CB | CG | sing | 1.51Å | 1.51Å | |
CG | CD1 | sing | 1.38Å | 1.39Å | Aromatic |
CG | CD2 | doub | 1.39Å | 1.38Å | Aromatic |
CD1 | CE1 | doub | 1.39Å | 1.41Å | Aromatic |
CD2 | CE2 | sing | 1.38Å | 1.41Å | Aromatic |
CE1 | CZ | sing | 1.38Å | 1.40Å | Aromatic |
CE2 | CZ | doub | 1.38Å | 1.41Å | Aromatic |
P | O1P | sing | 1.61Å | 1.53Å | |
P | O2P | sing | 1.61Å | 1.53Å | |
P | O3P | doub | 1.48Å | 1.52Å | |
N9 | C8 | sing | 1.36Å | 1.36Å | Aromatic |
C8 | N7 | doub | 1.30Å | 1.35Å | Aromatic |
N7 | C5 | sing | 1.36Å | 1.35Å | Aromatic |
C5 | C6 | doub | 1.40Å | 1.38Å | Aromatic |
C6 | N6 | sing | 1.38Å | 1.36Å | |
C6 | N1 | sing | 1.33Å | 1.37Å | Aromatic |
N1 | C2 | doub | 1.32Å | 1.37Å | Aromatic |
C2 | N3 | sing | 1.32Å | 1.35Å | Aromatic |
N9 | C4 | sing | 1.37Å | 1.33Å | Aromatic |
C5 | C4 | sing | 1.40Å | 1.39Å | Aromatic |
N3 | C4 | doub | 1.33Å | 1.37Å | Aromatic |
P | O5' | sing | 1.61Å | 1.63Å | |
O5' | C5' | sing | 1.43Å | 1.43Å | |
C5' | C4' | sing | 1.53Å | 1.52Å | |
C4' | O4' | sing | 1.44Å | 1.44Å | |
C4' | C3' | sing | 1.54Å | 1.53Å | |
C3' | O3' | sing | 1.44Å | 1.41Å | |
C3' | C2' | sing | 1.56Å | 1.51Å | |
C2' | O2' | sing | 1.44Å | 1.42Å | |
N9 | C1' | sing | 1.46Å | 1.48Å | |
O4' | C1' | sing | 1.44Å | 1.41Å | |
C2' | C1' | sing | 1.54Å | 1.52Å | |
CE1 | F | sing | 1.35Å | 1.35Å | |
CB | O1 | sing | 1.44Å | 1.45Å | |
CD2 | B | sing | 1.55Å | 1.51Å | |
O3' | B | sing | 1.37Å | 1.51Å | |
O2' | B | sing | 1.37Å | 1.51Å | |
O1 | B | sing | 1.37Å | 1.57Å | |
CB | HBC1 | sing | 1.09Å | 1.10Å | |
CB | HBC2 | sing | 1.09Å | 1.10Å | |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
CE2 | HE2 | sing | 1.08Å | 1.08Å | |
CZ | HZ | sing | 1.08Å | 1.08Å | |
O1P | H1P | sing | 0.97Å | 0.95Å | |
O2P | H2P | sing | 0.97Å | 0.95Å | |
C8 | H8 | sing | 1.08Å | 1.08Å | |
C1' | H1' | sing | 1.09Å | 1.10Å | |
N6 | H6N1 | sing | 0.97Å | 1.00Å | |
N6 | H6N2 | sing | 0.97Å | 1.00Å | |
C2 | H2 | sing | 1.08Å | 1.08Å | |
C5' | H5'1 | sing | 1.09Å | 1.10Å | |
C5' | H5'2 | sing | 1.09Å | 1.10Å | |
C4' | H4' | sing | 1.09Å | 1.10Å | |
C3' | H3' | sing | 1.09Å | 1.10Å | |
C2' | H2' | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CB | CG | CD1 | 125.3° | 133.6° |
CB | CG | CD2 | 112.0° | 106.4° |
CG | CB | O1 | 100.7° | 106.6° |
CG | CB | HBC1 | 112.5° | 110.0° |
CG | CB | HBC2 | 114.3° | 110.0° |
CD1 | CG | CD2 | 122.6° | 120.1° |
CG | CD1 | CE1 | 118.3° | 119.8° |
CG | CD1 | HD1 | 120.8° | 120.1° |
CG | CD2 | CE2 | 119.4° | 120.1° |
CG | CD2 | B | 114.1° | 106.0° |
CD1 | CE1 | CZ | 119.8° | 120.0° |
CD1 | CE1 | F | 117.9° | 120.0° |
CE1 | CD1 | HD1 | 120.8° | 120.0° |
CD2 | CE2 | CZ | 119.1° | 119.9° |
CE2 | CD2 | B | 126.4° | 133.9° |
CD2 | CE2 | HE2 | 120.5° | 120.1° |
CE1 | CZ | CE2 | 120.8° | 120.1° |
CZ | CE1 | F | 122.3° | 120.0° |
CE1 | CZ | HZ | 119.6° | 120.0° |
CZ | CE2 | HE2 | 120.5° | 120.1° |
CE2 | CZ | HZ | 119.6° | 120.0° |
O1P | P | O2P | 110.9° | 109.4° |
O1P | P | O3P | 113.3° | 109.5° |
O1P | P | O5' | 102.1° | 109.5° |
P | O1P | H1P | 109.5° | 114.0° |
O2P | P | O3P | 120.0° | 109.5° |
O2P | P | O5' | 102.3° | 109.5° |
P | O2P | H2P | 109.5° | 114.0° |
O3P | P | O5' | 105.7° | 109.5° |
N9 | C8 | N7 | 109.2° | 110.0° |
C8 | N9 | C4 | 108.9° | 107.4° |
C8 | N9 | C1' | 128.0° | 126.3° |
N9 | C8 | H8 | 125.4° | 125.0° |
C8 | N7 | C5 | 106.3° | 109.4° |
N7 | C8 | H8 | 125.4° | 125.0° |
N7 | C5 | C6 | 132.2° | 134.7° |
N7 | C5 | C4 | 109.3° | 107.1° |
C5 | C6 | N6 | 117.2° | 120.9° |
C5 | C6 | N1 | 120.0° | 118.4° |
C6 | C5 | C4 | 118.6° | 118.2° |
N6 | C6 | N1 | 122.8° | 120.7° |
C6 | N6 | H6N1 | 109.5° | 119.9° |
C6 | N6 | H6N2 | 109.5° | 120.0° |
C6 | N1 | C2 | 120.1° | 121.2° |
N1 | C2 | N3 | 121.0° | 122.5° |
N1 | C2 | H2 | 119.5° | 118.7° |
C2 | N3 | C4 | 119.8° | 120.6° |
N3 | C2 | H2 | 119.5° | 118.8° |
N9 | C4 | C5 | 106.4° | 106.1° |
N9 | C4 | N3 | 133.1° | 134.9° |
C4 | N9 | C1' | 123.1° | 126.3° |
C5 | C4 | N3 | 120.5° | 119.1° |
P | O5' | C5' | 118.9° | 123.0° |
O5' | C5' | C4' | 110.7° | 109.5° |
O5' | C5' | H5'1 | 109.1° | 109.5° |
O5' | C5' | H5'2 | 108.8° | 109.5° |
C5' | C4' | O4' | 108.2° | 110.3° |
C5' | C4' | C3' | 112.0° | 110.3° |
C4' | C5' | H5'1 | 109.1° | 109.5° |
C4' | C5' | H5'2 | 108.8° | 109.5° |
C5' | C4' | H4' | 108.5° | 110.3° |
O4' | C4' | C3' | 109.2° | 104.9° |
C4' | O4' | C1' | 110.0° | 105.3° |
O4' | C4' | H4' | 111.4° | 110.4° |
C4' | C3' | O3' | 112.6° | 108.6° |
C4' | C3' | C2' | 101.3° | 103.8° |
C3' | C4' | H4' | 107.6° | 110.5° |
C4' | C3' | H3' | 112.1° | 113.2° |
O3' | C3' | C2' | 107.0° | 103.1° |
C3' | O3' | B | 109.7° | 105.1° |
O3' | C3' | H3' | 106.8° | 113.2° |
C3' | C2' | O2' | 104.6° | 103.1° |
C3' | C2' | C1' | 106.6° | 103.8° |
C2' | C3' | H3' | 117.2° | 114.1° |
C3' | C2' | H2' | 115.1° | 113.4° |
O2' | C2' | C1' | 111.8° | 108.6° |
C2' | O2' | B | 110.1° | 105.1° |
O2' | C2' | H2' | 110.3° | 113.2° |
N9 | C1' | O4' | 114.5° | 110.4° |
N9 | C1' | C2' | 108.9° | 110.3° |
N9 | C1' | H1' | 105.4° | 110.3° |
O4' | C1' | C2' | 106.1° | 105.0° |
O4' | C1' | H1' | 108.3° | 110.4° |
C2' | C1' | H1' | 113.9° | 110.4° |
C1' | C2' | H2' | 108.4° | 113.8° |
CB | O1 | B | 116.3° | 106.0° |
O1 | CB | HBC1 | 112.5° | 110.1° |
O1 | CB | HBC2 | 114.3° | 110.1° |
CD2 | B | O3' | 122.3° | 110.6° |
CD2 | B | O2' | 121.8° | 110.8° |
CD2 | B | O1 | 96.8° | 106.6° |
O3' | B | O2' | 102.6° | 107.5° |
O3' | B | O1 | 106.4° | 110.6° |
O2' | B | O1 | 104.4° | 110.7° |
HBC1 | CB | HBC2 | 102.9° | 110.0° |
H6N1 | N6 | H6N2 | 109.5° | 120.1° |
H5'1 | C5' | H5'2 | 110.4° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CB | CG | CD1 | CD2 | 176.3° | 179.9° |
CB | CG | CD1 | CE1 | 179.6° | 179.9° |
CB | CG | CD2 | CE2 | 179.4° | 179.9° |
CG | CB | O1 | HBC1 | 120.0° | 119.3° |
CG | CB | O1 | HBC2 | 123.1° | 119.3° |
CB | CG | CD2 | B | 4.0° | 0.3° |
CG | CB | O1 | B | 1.1° | 28.8° |
CG | CB | HBC1 | HBC2 | 123.6° | 121.3° |
CB | CG | CD1 | HD1 | 0.4° | 0.2° |
CG | CD1 | CE1 | HD1 | 180.0° | 180.0° |
CD1 | CG | CD2 | CE2 | 3.9° | 0.0° |
CG | CD1 | CE1 | CZ | 1.8° | 0.0° |
CG | CD1 | CE1 | F | 179.5° | 180.0° |
CD1 | CG | CB | O1 | 178.3° | 162.8° |
CD1 | CG | CD2 | B | 179.3° | 179.7° |
CD1 | CG | CB | HBC1 | 58.3° | 77.9° |
CD1 | CG | CB | HBC2 | 58.7° | 43.4° |
CD2 | CG | CD1 | CE1 | 3.3° | 0.1° |
CG | CD2 | CE2 | B | 174.7° | 179.7° |
CG | CD2 | CE2 | CZ | 3.0° | 0.0° |
CD2 | CG | CB | O1 | 1.7° | 17.3° |
CG | CD2 | B | O3' | 118.4° | 102.8° |
CG | CD2 | B | O2' | 107.6° | 138.2° |
CG | CD2 | B | O1 | 4.1° | 17.6° |
CD2 | CG | CB | HBC1 | 118.3° | 102.1° |
CD2 | CG | CB | HBC2 | 124.7° | 136.6° |
CD2 | CG | CD1 | HD1 | 176.7° | 179.9° |
CG | CD2 | CE2 | HE2 | 177.0° | 180.0° |
CD1 | CE1 | CZ | F | 177.6° | 180.0° |
CD1 | CE1 | CZ | CE2 | 1.1° | 0.0° |
CD1 | CE1 | CZ | HZ | 178.9° | 180.0° |
CD2 | CE2 | CZ | CE1 | 1.7° | 0.0° |
CD2 | CE2 | CZ | HE2 | 180.0° | 179.9° |
CE2 | CD2 | B | O3' | 66.6° | 77.5° |
CE2 | CD2 | B | O2' | 67.4° | 41.5° |
CE2 | CD2 | B | O1 | 179.1° | 162.1° |
CD2 | CE2 | CZ | HZ | 178.3° | 180.0° |
CE1 | CZ | CE2 | HZ | 180.0° | 180.0° |
CZ | CE1 | CD1 | HD1 | 178.2° | 179.9° |
CE1 | CZ | CE2 | HE2 | 178.3° | 180.0° |
CE2 | CZ | CE1 | F | 178.7° | 179.9° |
CZ | CE2 | CD2 | B | 177.7° | 179.7° |
O1P | P | O2P | O3P | 135.2° | 120.0° |
O1P | P | O2P | O5' | 108.3° | 120.0° |
O1P | P | O3P | O5' | 111.0° | 120.0° |
O1P | P | O5' | C5' | 58.5° | 65.0° |
O1P | P | O2P | H2P | 22.8° | 60.0° |
O2P | P | O3P | O5' | 114.8° | 120.0° |
O2P | P | O5' | C5' | 56.4° | 175.0° |
O2P | P | O1P | H1P | 147.5° | 60.0° |
O3P | P | O5' | C5' | 177.2° | 55.0° |
O3P | P | O1P | H1P | 9.2° | 180.0° |
O3P | P | O2P | H2P | 158.0° | 60.0° |
N9 | C8 | N7 | H8 | 180.0° | 179.9° |
N9 | C8 | N7 | C5 | 0.0° | 0.0° |
C8 | N9 | C4 | C1' | 178.1° | 179.8° |
C8 | N9 | C4 | C5 | 0.5° | 0.0° |
C8 | N9 | C4 | N3 | 178.9° | 180.0° |
C8 | N9 | C1' | O4' | 86.8° | 23.5° |
C8 | N9 | C1' | C2' | 31.7° | 92.0° |
C8 | N9 | C1' | H1' | 154.3° | 145.7° |
C8 | N7 | C5 | C6 | 179.6° | 180.0° |
N7 | C8 | N9 | C4 | 0.3° | 0.1° |
C8 | N7 | C5 | C4 | 0.3° | 0.0° |
N7 | C8 | N9 | C1' | 177.6° | 179.7° |
N7 | C5 | C6 | C4 | 179.9° | 180.0° |
N7 | C5 | C6 | N6 | 0.0° | 0.0° |
N7 | C5 | C6 | N1 | 179.5° | 180.0° |
N7 | C5 | C4 | N9 | 0.5° | 0.0° |
N7 | C5 | C4 | N3 | 179.1° | 180.0° |
C5 | N7 | C8 | H8 | 180.0° | 180.0° |
C5 | C6 | N6 | N1 | 179.5° | 180.0° |
C5 | C6 | N1 | C2 | 0.2° | 0.0° |
C6 | C5 | C4 | N9 | 179.4° | 180.0° |
C6 | C5 | C4 | N3 | 0.8° | 0.0° |
C5 | C6 | N6 | H6N1 | 6.0° | 0.0° |
C5 | C6 | N6 | H6N2 | 114.0° | 180.0° |
N6 | C6 | N1 | C2 | 179.2° | 180.0° |
N6 | C6 | C5 | C4 | 179.9° | 180.0° |
C6 | N6 | H6N1 | H6N2 | 120.0° | 180.0° |
C6 | N1 | C2 | N3 | 0.5° | 0.1° |
N1 | C6 | C5 | C4 | 0.4° | 0.0° |
N1 | C6 | N6 | H6N1 | 174.5° | 180.0° |
N1 | C6 | N6 | H6N2 | 65.4° | 0.0° |
C6 | N1 | C2 | H2 | 179.4° | 180.0° |
N1 | C2 | N3 | H2 | 180.0° | 179.9° |
N1 | C2 | N3 | C4 | 0.2° | 0.1° |
C2 | N3 | C4 | N9 | 178.7° | 180.0° |
C2 | N3 | C4 | C5 | 0.5° | 0.1° |
N9 | C4 | C5 | N3 | 178.6° | 180.0° |
C4 | N9 | C1' | O4' | 95.5° | 156.7° |
C4 | N9 | C1' | C2' | 145.9° | 87.7° |
C4 | N9 | C8 | H8 | 179.7° | 180.0° |
C4 | N9 | C1' | H1' | 23.4° | 34.5° |
C5 | C4 | N9 | C1' | 177.6° | 179.8° |
N3 | C4 | N9 | C1' | 0.8° | 0.2° |
C4 | N3 | C2 | H2 | 179.8° | 180.0° |
P | O5' | C5' | C4' | 144.7° | 180.0° |
O5' | P | O1P | H1P | 104.0° | 60.0° |
O5' | P | O2P | H2P | 85.5° | 180.0° |
P | O5' | C5' | H5'1 | 95.3° | 60.0° |
P | O5' | C5' | H5'2 | 25.2° | 60.0° |
O5' | C5' | C4' | H5'1 | 120.0° | 120.0° |
O5' | C5' | C4' | H5'2 | 119.5° | 120.0° |
O5' | C5' | C4' | O4' | 52.8° | 66.5° |
O5' | C5' | C4' | C3' | 67.6° | 178.0° |
O5' | C5' | H5'1 | H5'2 | 119.5° | 120.0° |
O5' | C5' | C4' | H4' | 173.9° | 55.7° |
C5' | C4' | O4' | C3' | 122.2° | 118.8° |
C5' | C4' | O4' | H4' | 119.2° | 122.2° |
C5' | C4' | C3' | H4' | 119.1° | 122.2° |
C5' | C4' | C3' | O3' | 107.9° | 107.7° |
C5' | C4' | C3' | C2' | 138.2° | 143.1° |
C5' | C4' | O4' | C1' | 125.9° | 159.7° |
C4' | C5' | H5'1 | H5'2 | 119.5° | 120.0° |
C5' | C4' | C3' | H3' | 12.5° | 18.9° |
O4' | C4' | C3' | H4' | 121.0° | 118.9° |
O4' | C4' | C3' | O3' | 132.2° | 133.5° |
O4' | C4' | C3' | C2' | 18.3° | 24.3° |
C4' | O4' | C1' | N9 | 107.4° | 159.7° |
C4' | O4' | C1' | C2' | 12.7° | 40.8° |
C4' | O4' | C1' | H1' | 135.4° | 78.1° |
O4' | C4' | C5' | H5'1 | 172.9° | 53.6° |
O4' | C4' | C5' | H5'2 | 66.7° | 173.5° |
O4' | C4' | C3' | H3' | 107.4° | 100.0° |
C4' | C3' | O3' | C2' | 110.4° | 109.7° |
C4' | C3' | O3' | H3' | 123.4° | 126.6° |
C4' | C3' | C2' | H3' | 122.2° | 123.7° |
C4' | C3' | C2' | O2' | 93.1° | 113.1° |
C3' | C4' | O4' | C1' | 3.7° | 40.9° |
C4' | C3' | C2' | C1' | 25.4° | 0.1° |
C4' | C3' | O3' | B | 92.0° | 132.6° |
C3' | C4' | C5' | H5'1 | 52.5° | 61.9° |
C3' | C4' | C5' | H5'2 | 172.9° | 58.0° |
C4' | C3' | C2' | H2' | 145.7° | 124.2° |
O3' | C3' | C2' | H3' | 119.8° | 123.2° |
O3' | C3' | C2' | O2' | 24.9° | 0.1° |
O3' | C3' | C2' | C1' | 143.5° | 113.3° |
C3' | O3' | B | CD2 | 136.2° | 161.2° |
C3' | O3' | B | O2' | 5.0° | 40.1° |
C3' | O3' | B | O1 | 114.4° | 80.9° |
O3' | C3' | C4' | H4' | 11.2° | 14.5° |
O3' | C3' | C2' | H2' | 96.3° | 122.7° |
C3' | C2' | O2' | C1' | 115.0° | 109.7° |
C3' | C2' | O2' | H2' | 124.3° | 122.9° |
C3' | C2' | C1' | N9 | 99.1° | 142.9° |
C3' | C2' | C1' | O4' | 24.6° | 24.0° |
C3' | C2' | C1' | H2' | 124.5° | 123.7° |
C2' | C3' | O3' | B | 18.4° | 23.0° |
C3' | C2' | O2' | B | 22.1° | 23.1° |
C3' | C2' | C1' | H1' | 143.6° | 94.9° |
C2' | C3' | C4' | H4' | 102.7° | 94.7° |
O2' | C2' | C1' | N9 | 147.2° | 107.9° |
O2' | C2' | C1' | O4' | 89.1° | 133.3° |
O2' | C2' | C1' | H2' | 121.8° | 127.1° |
C2' | O2' | B | CD2 | 152.8° | 161.1° |
C2' | O2' | B | O3' | 11.3° | 40.1° |
C2' | O2' | B | O1 | 99.5° | 80.8° |
O2' | C2' | C1' | H1' | 29.9° | 14.3° |
O2' | C2' | C3' | H3' | 144.7° | 123.2° |
N9 | C1' | O4' | C2' | 120.1° | 118.8° |
N9 | C1' | O4' | H1' | 117.2° | 122.2° |
N9 | C1' | C2' | H1' | 117.3° | 122.2° |
C1' | N9 | C8 | H8 | 2.4° | 0.2° |
N9 | C1' | C2' | H2' | 25.4° | 19.2° |
O4' | C1' | C2' | H1' | 119.0° | 119.0° |
C1' | O4' | C4' | H4' | 114.9° | 78.1° |
O4' | C1' | C2' | H2' | 149.1° | 99.7° |
C1' | C2' | O2' | B | 137.1° | 132.8° |
C1' | C2' | C3' | H3' | 96.8° | 123.5° |
F | CE1 | CD1 | HD1 | 0.5° | 0.0° |
F | CE1 | CZ | HZ | 1.3° | 0.0° |
CB | O1 | B | CD2 | 3.1° | 28.3° |
CB | O1 | B | O3' | 129.6° | 92.0° |
CB | O1 | B | O2' | 122.2° | 148.9° |
O1 | CB | HBC1 | HBC2 | 123.5° | 121.6° |
CD2 | B | O3' | O2' | 141.2° | 121.1° |
CD2 | B | O3' | O1 | 109.4° | 117.9° |
CD2 | B | O2' | O1 | 107.7° | 118.1° |
B | CD2 | CE2 | HE2 | 2.2° | 0.3° |
O3' | B | O2' | O1 | 110.9° | 120.9° |
B | O3' | C3' | H3' | 144.6° | 100.8° |
B | O2' | C2' | H2' | 102.2° | 99.8° |
B | O1 | CB | HBC1 | 121.1° | 90.5° |
B | O1 | CB | HBC2 | 121.9° | 148.1° |
HE2 | CE2 | CZ | HZ | 1.7° | 0.0° |
H1' | C1' | C2' | H2' | 91.9° | 141.4° |
H5'1 | C5' | C4' | H4' | 66.1° | 175.8° |
H5'2 | C5' | C4' | H4' | 54.4° | 64.3° |
H4' | C4' | C3' | H3' | 131.6° | 141.1° |
H3' | C3' | C2' | H2' | 23.5° | 0.5° |