AN6
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O' | C' | doub | 1.21Å | 1.25Å | |
C' | O5' | sing | 1.34Å | 1.25Å | |
C' | CA' | sing | 1.51Å | 1.53Å | |
N' | CA' | sing | 1.47Å | 1.47Å | |
N' | HN' | sing | 1.01Å | 1.00Å | |
N' | HN'A | sing | 1.01Å | 1.00Å | |
C1 | C3 | sing | 1.53Å | 1.52Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C1 | H1A | sing | 1.09Å | 1.10Å | |
C1 | H1B | sing | 1.09Å | 1.10Å | |
C6 | N1 | doub | 1.33Å | 1.35Å | Aromatic |
N1 | C2 | sing | 1.32Å | 1.33Å | Aromatic |
N3 | C2 | doub | 1.32Å | 1.32Å | Aromatic |
C2 | H2 | sing | 1.08Å | 1.08Å | |
C3 | N10 | sing | 1.47Å | 1.46Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
C3 | H3A | sing | 1.09Å | 1.10Å | |
C4 | N3 | sing | 1.33Å | 1.34Å | Aromatic |
N9 | C4 | sing | 1.37Å | 1.33Å | Aromatic |
C5 | C4 | doub | 1.40Å | 1.38Å | Aromatic |
N7 | C5 | sing | 1.36Å | 1.33Å | Aromatic |
C5 | C6 | sing | 1.40Å | 1.38Å | Aromatic |
N6 | C6 | sing | 1.38Å | 1.33Å | |
N6 | HN6 | sing | 0.97Å | 1.00Å | |
N6 | HN6A | sing | 0.97Å | 1.00Å | |
C8 | N7 | doub | 1.30Å | 1.34Å | Aromatic |
C8 | N9 | sing | 1.36Å | 1.34Å | Aromatic |
C8 | H8 | sing | 1.08Å | 1.08Å | |
N9 | C1' | sing | 1.47Å | 1.47Å | |
O4' | C1' | sing | 1.44Å | 1.42Å | |
C2' | C1' | sing | 1.55Å | 1.52Å | |
C1' | H1' | sing | 1.09Å | 1.10Å | |
CG' | N10 | sing | 1.47Å | 1.47Å | |
N10 | C5' | sing | 1.47Å | 1.46Å | |
C3' | C2' | sing | 1.55Å | 1.53Å | |
C2' | O2' | sing | 1.43Å | 1.42Å | |
C2' | H2' | sing | 1.09Å | 1.10Å | |
O2' | HO2' | sing | 0.97Å | 0.95Å | |
C4' | C3' | sing | 1.54Å | 1.54Å | |
C3' | O3' | sing | 1.43Å | 1.43Å | |
C3' | H3' | sing | 1.09Å | 1.10Å | |
O3' | HO3' | sing | 0.97Å | 0.95Å | |
C5' | C4' | sing | 1.53Å | 1.51Å | |
O4' | C4' | sing | 1.44Å | 1.44Å | |
C4' | H4' | sing | 1.09Å | 1.10Å | |
C5' | H5' | sing | 1.09Å | 1.10Å | |
C5' | H5'A | sing | 1.09Å | 1.10Å | |
O5' | HO5' | sing | 0.97Å | 0.95Å | |
CB' | CA' | sing | 1.53Å | 1.53Å | |
CA' | HA' | sing | 1.09Å | 1.10Å | |
CG' | CB' | sing | 1.53Å | 1.52Å | |
CB' | HB' | sing | 1.09Å | 1.10Å | |
CB' | HB'A | sing | 1.09Å | 1.10Å | |
CG' | HG' | sing | 1.09Å | 1.10Å | |
CG' | HG'A | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O' | C' | O5' | 125.9° | 120.0° |
O' | C' | CA' | 117.1° | 120.0° |
O5' | C' | CA' | 117.0° | 120.0° |
C' | O5' | HO5' | 109.5° | 117.0° |
C' | CA' | N' | 111.8° | 109.5° |
C' | CA' | CB' | 109.6° | 109.5° |
C' | CA' | HA' | 108.4° | 109.5° |
CA' | N' | HN' | 109.5° | 111.0° |
CA' | N' | HN'A | 109.5° | 111.0° |
N' | CA' | CB' | 111.0° | 109.4° |
N' | CA' | HA' | 106.8° | 109.5° |
HN' | N' | HN'A | 109.5° | 111.0° |
C3 | C1 | H1 | 109.5° | 109.5° |
C3 | C1 | H1A | 109.5° | 109.5° |
C3 | C1 | H1B | 109.4° | 109.5° |
C1 | C3 | N10 | 108.6° | 109.4° |
C1 | C3 | H3 | 109.8° | 109.5° |
C1 | C3 | H3A | 109.8° | 109.4° |
H1 | C1 | H1A | 109.5° | 109.5° |
H1 | C1 | H1B | 109.5° | 109.4° |
H1A | C1 | H1B | 109.5° | 109.4° |
C6 | N1 | C2 | 121.4° | 121.2° |
N1 | C6 | C5 | 118.5° | 118.5° |
N1 | C6 | N6 | 120.6° | 120.7° |
N1 | C2 | N3 | 121.3° | 122.5° |
N1 | C2 | H2 | 119.3° | 118.7° |
N3 | C2 | H2 | 119.4° | 118.8° |
C2 | N3 | C4 | 120.3° | 120.7° |
N10 | C3 | H3 | 109.8° | 109.5° |
N10 | C3 | H3A | 109.8° | 109.5° |
C3 | N10 | CG' | 108.9° | 111.0° |
C3 | N10 | C5' | 103.1° | 111.0° |
H3 | C3 | H3A | 109.2° | 109.5° |
N3 | C4 | N9 | 133.0° | 135.0° |
N3 | C4 | C5 | 119.9° | 119.0° |
N9 | C4 | C5 | 107.2° | 106.0° |
C4 | N9 | C8 | 108.4° | 107.5° |
C4 | N9 | C1' | 125.0° | 126.3° |
C4 | C5 | N7 | 107.4° | 107.1° |
C4 | C5 | C6 | 118.6° | 118.2° |
N7 | C5 | C6 | 134.0° | 134.7° |
C5 | N7 | C8 | 108.2° | 109.4° |
C5 | C6 | N6 | 120.9° | 120.8° |
C6 | N6 | HN6 | 109.5° | 120.0° |
C6 | N6 | HN6A | 109.5° | 120.0° |
HN6 | N6 | HN6A | 109.4° | 120.0° |
N7 | C8 | N9 | 108.9° | 110.0° |
N7 | C8 | H8 | 125.5° | 125.0° |
N9 | C8 | H8 | 125.6° | 125.0° |
C8 | N9 | C1' | 126.6° | 126.3° |
N9 | C1' | O4' | 109.1° | 110.6° |
N9 | C1' | C2' | 109.8° | 110.6° |
N9 | C1' | H1' | 107.6° | 110.5° |
O4' | C1' | C2' | 103.0° | 103.6° |
O4' | C1' | H1' | 114.0° | 110.6° |
C1' | O4' | C4' | 105.3° | 106.9° |
C2' | C1' | H1' | 113.3° | 110.6° |
C1' | C2' | C3' | 101.0° | 102.1° |
C1' | C2' | O2' | 109.4° | 110.9° |
C1' | C2' | H2' | 115.7° | 110.9° |
CG' | N10 | C5' | 110.6° | 111.1° |
N10 | CG' | CB' | 108.3° | 109.5° |
N10 | CG' | HG' | 109.9° | 109.5° |
N10 | CG' | HG'A | 109.9° | 109.4° |
N10 | C5' | C4' | 111.0° | 109.5° |
N10 | C5' | H5' | 109.0° | 109.5° |
N10 | C5' | H5'A | 109.0° | 109.5° |
C3' | C2' | O2' | 111.8° | 110.9° |
C3' | C2' | H2' | 113.5° | 110.9° |
C2' | C3' | C4' | 102.8° | 104.2° |
C2' | C3' | O3' | 110.5° | 110.5° |
C2' | C3' | H3' | 112.7° | 110.5° |
O2' | C2' | H2' | 105.6° | 110.8° |
C2' | O2' | HO2' | 109.5° | 114.0° |
C4' | C3' | O3' | 108.3° | 110.5° |
C4' | C3' | H3' | 114.8° | 110.6° |
C3' | C4' | C5' | 111.6° | 109.9° |
C3' | C4' | O4' | 107.1° | 107.4° |
C3' | C4' | H4' | 107.9° | 109.9° |
O3' | C3' | H3' | 107.6° | 110.5° |
C3' | O3' | HO3' | 109.5° | 114.0° |
C5' | C4' | O4' | 103.8° | 110.0° |
C5' | C4' | H4' | 111.1° | 109.9° |
C4' | C5' | H5' | 109.0° | 109.5° |
C4' | C5' | H5'A | 109.0° | 109.5° |
O4' | C4' | H4' | 115.3° | 109.7° |
H5' | C5' | H5'A | 110.0° | 109.4° |
CB' | CA' | HA' | 109.2° | 109.5° |
CA' | CB' | CG' | 113.7° | 109.5° |
CA' | CB' | HB' | 108.1° | 109.5° |
CA' | CB' | HB'A | 108.1° | 109.4° |
CG' | CB' | HB' | 108.1° | 109.5° |
CG' | CB' | HB'A | 108.1° | 109.5° |
CB' | CG' | HG' | 109.9° | 109.5° |
CB' | CG' | HG'A | 109.9° | 109.5° |
HB' | CB' | HB'A | 110.9° | 109.5° |
HG' | CG' | HG'A | 109.1° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O' | C' | O5' | CA' | 179.7° | 179.7° |
O' | C' | CA' | N' | 21.7° | 19.7° |
O' | C' | O5' | HO5' | 0.0° | 0.3° |
O' | C' | CA' | CB' | 101.9° | 100.2° |
O' | C' | CA' | HA' | 139.1° | 139.7° |
O5' | C' | CA' | N' | 158.6° | 160.0° |
O5' | C' | CA' | CB' | 77.9° | 80.0° |
O5' | C' | CA' | HA' | 41.2° | 40.0° |
C' | CA' | N' | CB' | 122.7° | 120.0° |
C' | CA' | N' | HA' | 118.4° | 120.1° |
C' | CA' | N' | HN' | 180.0° | 64.0° |
C' | CA' | N' | HN'A | 60.0° | 60.0° |
CA' | C' | O5' | HO5' | 179.7° | 180.0° |
C' | CA' | CB' | HA' | 118.5° | 120.0° |
C' | CA' | CB' | CG' | 67.8° | 175.0° |
C' | CA' | CB' | HB' | 52.1° | 65.0° |
C' | CA' | CB' | HB'A | 172.2° | 55.1° |
CA' | N' | HN' | HN'A | 120.0° | 123.9° |
N' | CA' | CB' | HA' | 117.5° | 120.0° |
N' | CA' | CB' | CG' | 56.2° | 65.0° |
N' | CA' | CB' | HB' | 176.2° | 55.0° |
N' | CA' | CB' | HB'A | 63.8° | 175.0° |
HN' | N' | CA' | CB' | 57.3° | 176.1° |
HN' | N' | CA' | HA' | 61.6° | 56.1° |
HN'A | N' | CA' | CB' | 177.3° | 60.0° |
HN'A | N' | CA' | HA' | 58.4° | 180.0° |
C3 | C1 | H1 | H1A | 120.0° | 120.1° |
C3 | C1 | H1 | H1B | 120.0° | 120.0° |
C3 | C1 | H1A | H1B | 120.0° | 120.0° |
C1 | C3 | N10 | H3 | 120.0° | 119.9° |
C1 | C3 | N10 | H3A | 120.0° | 120.0° |
C1 | C3 | H3 | H3A | 120.4° | 120.0° |
C1 | C3 | N10 | CG' | 69.7° | 71.8° |
C1 | C3 | N10 | C5' | 172.9° | 164.2° |
H1 | C1 | H1A | H1B | 120.0° | 119.9° |
H1 | C1 | C3 | N10 | 180.0° | 65.2° |
H1 | C1 | C3 | H3 | 60.0° | 54.7° |
H1 | C1 | C3 | H3A | 60.0° | 174.8° |
H1A | C1 | C3 | N10 | 60.0° | 54.8° |
H1A | C1 | C3 | H3 | 60.0° | 174.8° |
H1A | C1 | C3 | H3A | 180.0° | 65.2° |
H1B | C1 | C3 | N10 | 60.0° | 174.8° |
H1B | C1 | C3 | H3 | 180.0° | 65.2° |
H1B | C1 | C3 | H3A | 60.0° | 54.8° |
C6 | N1 | C2 | N3 | 0.3° | 0.0° |
C6 | N1 | C2 | H2 | 179.7° | 180.0° |
N1 | C6 | C5 | C4 | 0.1° | 0.0° |
N1 | C6 | C5 | N7 | 179.8° | 180.0° |
N1 | C6 | C5 | N6 | 179.5° | 180.0° |
N1 | C6 | N6 | HN6 | 0.0° | 180.0° |
N1 | C6 | N6 | HN6A | 120.0° | 0.1° |
N1 | C2 | N3 | H2 | 180.0° | 180.0° |
N1 | C2 | N3 | C4 | 0.4° | 0.0° |
C2 | N1 | C6 | C5 | 0.1° | 0.0° |
C2 | N1 | C6 | N6 | 179.4° | 180.0° |
C2 | N3 | C4 | N9 | 179.5° | 180.0° |
C2 | N3 | C4 | C5 | 0.4° | 0.0° |
H2 | C2 | N3 | C4 | 179.6° | 180.0° |
N10 | C3 | H3 | H3A | 120.4° | 120.1° |
C3 | N10 | CG' | C5' | 112.6° | 123.9° |
C3 | N10 | C5' | C4' | 147.0° | 66.0° |
C3 | N10 | C5' | H5' | 93.0° | 174.0° |
C3 | N10 | C5' | H5'A | 27.0° | 54.0° |
C3 | N10 | CG' | CB' | 134.9° | 164.1° |
C3 | N10 | CG' | HG' | 14.9° | 44.1° |
C3 | N10 | CG' | HG'A | 105.1° | 75.9° |
H3 | C3 | N10 | CG' | 50.3° | 48.2° |
H3 | C3 | N10 | C5' | 67.1° | 75.8° |
H3A | C3 | N10 | CG' | 170.3° | 168.3° |
H3A | C3 | N10 | C5' | 52.9° | 44.3° |
N3 | C4 | N9 | C5 | 179.9° | 179.9° |
N3 | C4 | C5 | N7 | 180.0° | 179.9° |
N3 | C4 | C5 | C6 | 0.2° | 0.0° |
N3 | C4 | N9 | C8 | 179.7° | 179.9° |
N3 | C4 | N9 | C1' | 0.2° | 0.0° |
N9 | C4 | C5 | N7 | 0.1° | 0.0° |
N9 | C4 | C5 | C6 | 179.7° | 180.0° |
C4 | N9 | C8 | N7 | 0.6° | 0.0° |
C4 | N9 | C8 | C1' | 179.5° | 180.0° |
C4 | N9 | C8 | H8 | 179.4° | 180.0° |
C4 | N9 | C1' | O4' | 127.6° | 158.6° |
C4 | N9 | C1' | C2' | 120.2° | 87.2° |
C4 | N9 | C1' | H1' | 3.5° | 35.7° |
C4 | C5 | N7 | C6 | 179.8° | 180.0° |
C4 | C5 | C6 | N6 | 179.4° | 180.0° |
C4 | C5 | N7 | C8 | 0.2° | 0.0° |
C5 | C4 | N9 | C8 | 0.4° | 0.0° |
C5 | C4 | N9 | C1' | 180.0° | 180.0° |
N7 | C5 | C6 | N6 | 0.3° | 0.0° |
C5 | N7 | C8 | N9 | 0.5° | 0.0° |
C5 | N7 | C8 | H8 | 179.5° | 180.0° |
C5 | C6 | N6 | HN6 | 179.5° | 0.0° |
C5 | C6 | N6 | HN6A | 60.5° | 180.0° |
C6 | C5 | N7 | C8 | 180.0° | 180.0° |
C6 | N6 | HN6 | HN6A | 120.0° | 179.9° |
N7 | C8 | N9 | H8 | 180.0° | 180.0° |
N7 | C8 | N9 | C1' | 179.9° | 180.0° |
C8 | N9 | C1' | O4' | 51.8° | 21.4° |
C8 | N9 | C1' | C2' | 60.3° | 92.8° |
C8 | N9 | C1' | H1' | 175.9° | 144.2° |
H8 | C8 | N9 | C1' | 0.1° | 0.1° |
N9 | C1' | O4' | C2' | 116.6° | 118.6° |
N9 | C1' | O4' | H1' | 120.3° | 122.8° |
N9 | C1' | C2' | H1' | 120.4° | 122.8° |
N9 | C1' | C2' | C3' | 160.3° | 155.5° |
N9 | C1' | C2' | O2' | 81.7° | 86.3° |
N9 | C1' | C2' | H2' | 37.4° | 37.3° |
N9 | C1' | O4' | C4' | 160.4° | 158.4° |
O4' | C1' | C2' | H1' | 123.6° | 118.6° |
O4' | C1' | C2' | C3' | 44.2° | 37.0° |
O4' | C1' | C2' | O2' | 162.2° | 155.2° |
O4' | C1' | C2' | H2' | 78.7° | 81.3° |
C1' | O4' | C4' | C3' | 25.6° | 26.3° |
C1' | O4' | C4' | C5' | 143.8° | 145.9° |
C1' | O4' | C4' | H4' | 94.6° | 93.1° |
C1' | C2' | C3' | O2' | 116.2° | 118.2° |
C1' | C2' | C3' | H2' | 124.4° | 118.2° |
C1' | C2' | O2' | H2' | 125.1° | 123.6° |
C1' | C2' | O2' | HO2' | 180.0° | 180.0° |
C1' | C2' | C3' | C4' | 27.5° | 20.9° |
C1' | C2' | C3' | O3' | 87.9° | 97.8° |
C1' | C2' | C3' | H3' | 151.6° | 139.6° |
C2' | C1' | O4' | C4' | 43.8° | 39.9° |
H1' | C1' | C2' | C3' | 79.3° | 81.6° |
H1' | C1' | C2' | O2' | 38.6° | 36.6° |
H1' | C1' | C2' | H2' | 157.7° | 160.1° |
H1' | C1' | O4' | C4' | 79.4° | 78.7° |
CG' | N10 | C5' | C4' | 96.7° | 170.0° |
CG' | N10 | C5' | H5' | 23.2° | 50.0° |
CG' | N10 | C5' | H5'A | 143.3° | 69.9° |
N10 | CG' | CB' | CA' | 177.4° | 174.9° |
N10 | CG' | CB' | HG' | 120.0° | 120.0° |
N10 | CG' | CB' | HG'A | 120.0° | 119.9° |
N10 | CG' | CB' | HB' | 62.7° | 54.9° |
N10 | CG' | CB' | HB'A | 57.4° | 65.2° |
N10 | CG' | HG' | HG'A | 120.5° | 120.0° |
N10 | C5' | C4' | C3' | 75.3° | 175.0° |
N10 | C5' | C4' | H5' | 120.0° | 120.0° |
N10 | C5' | C4' | H5'A | 120.0° | 120.0° |
N10 | C5' | C4' | O4' | 169.7° | 66.9° |
N10 | C5' | C4' | H4' | 45.3° | 54.0° |
N10 | C5' | H5' | H5'A | 119.4° | 119.9° |
C5' | N10 | CG' | CB' | 112.5° | 71.9° |
C5' | N10 | CG' | HG' | 127.5° | 168.1° |
C5' | N10 | CG' | HG'A | 7.5° | 48.1° |
C3' | C2' | O2' | H2' | 123.9° | 123.7° |
C3' | C2' | O2' | HO2' | 69.0° | 67.3° |
C2' | C3' | C4' | O3' | 117.0° | 118.7° |
C2' | C3' | C4' | H3' | 122.7° | 118.7° |
C2' | C3' | O3' | H3' | 123.4° | 122.6° |
C2' | C3' | O3' | HO3' | 180.0° | 61.5° |
C2' | C3' | C4' | C5' | 110.2° | 121.6° |
C2' | C3' | C4' | O4' | 2.7° | 1.9° |
C2' | C3' | C4' | H4' | 127.5° | 117.4° |
O2' | C2' | C3' | C4' | 143.8° | 139.1° |
O2' | C2' | C3' | O3' | 28.3° | 20.4° |
O2' | C2' | C3' | H3' | 92.1° | 102.2° |
H2' | C2' | O2' | HO2' | 54.9° | 56.4° |
H2' | C2' | C3' | C4' | 96.9° | 97.3° |
H2' | C2' | C3' | O3' | 147.7° | 144.0° |
H2' | C2' | C3' | H3' | 27.2° | 21.5° |
C4' | C3' | O3' | H3' | 124.6° | 122.7° |
C4' | C3' | O3' | HO3' | 68.0° | 176.2° |
C3' | C4' | C5' | O4' | 115.0° | 118.0° |
C3' | C4' | C5' | H4' | 120.5° | 121.1° |
C3' | C4' | O4' | H4' | 120.1° | 119.4° |
C3' | C4' | C5' | H5' | 164.8° | 65.0° |
C3' | C4' | C5' | H5'A | 44.7° | 55.0° |
O3' | C3' | C4' | C5' | 132.8° | 119.7° |
O3' | C3' | C4' | O4' | 114.3° | 120.6° |
O3' | C3' | C4' | H4' | 10.4° | 1.3° |
H3' | C3' | O3' | HO3' | 56.6° | 61.1° |
H3' | C3' | C4' | C5' | 12.5° | 2.9° |
H3' | C3' | C4' | O4' | 125.5° | 116.8° |
H3' | C3' | C4' | H4' | 109.8° | 123.9° |
C5' | C4' | O4' | H4' | 121.7° | 121.0° |
C4' | C5' | H5' | H5'A | 119.4° | 120.0° |
O4' | C4' | C5' | H5' | 49.7° | 53.1° |
O4' | C4' | C5' | H5'A | 70.3° | 173.0° |
H4' | C4' | C5' | H5' | 74.7° | 174.0° |
H4' | C4' | C5' | H5'A | 165.2° | 66.1° |
CA' | CB' | CG' | HB' | 120.0° | 120.0° |
CA' | CB' | CG' | HB'A | 120.0° | 119.9° |
CA' | CB' | HB' | HB'A | 118.3° | 120.0° |
CA' | CB' | CG' | HG' | 62.6° | 54.9° |
CA' | CB' | CG' | HG'A | 57.4° | 65.2° |
HA' | CA' | CB' | CG' | 173.6° | 55.0° |
HA' | CA' | CB' | HB' | 66.4° | 175.0° |
HA' | CA' | CB' | HB'A | 53.7° | 65.0° |
CG' | CB' | HB' | HB'A | 118.3° | 120.0° |
CB' | CG' | HG' | HG'A | 120.5° | 120.0° |
HB' | CB' | CG' | HG' | 57.3° | 65.2° |
HB' | CB' | CG' | HG'A | 177.3° | 174.8° |
HB'A | CB' | CG' | HG' | 177.4° | 174.8° |
HB'A | CB' | CG' | HG'A | 62.6° | 54.8° |