AN2
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N3B | PB | sing | 1.68Å | 1.66Å | |
N3B | H3B1 | sing | 1.01Å | 1.00Å | |
N3B | H3B2 | sing | 1.01Å | 1.00Å | |
PB | O2B | sing | 1.61Å | 1.60Å | |
PB | O1B | doub | 1.48Å | 1.48Å | |
PB | O3A | sing | 1.61Å | 1.68Å | |
O2B | HO2B | sing | 0.97Å | 0.95Å | |
O3A | PA | sing | 1.61Å | 1.67Å | |
PA | O1A | doub | 1.48Å | 1.47Å | |
PA | O2A | sing | 1.61Å | 1.51Å | |
PA | O5' | sing | 1.61Å | 1.61Å | |
O2A | HO2A | sing | 0.97Å | 0.95Å | |
O5' | C5' | sing | 1.43Å | 1.48Å | |
C5' | C4' | sing | 1.53Å | 1.57Å | |
C5' | H5'1 | sing | 1.09Å | 1.10Å | |
C5' | H5'2 | sing | 1.09Å | 1.10Å | |
C4' | O4' | sing | 1.44Å | 1.47Å | |
C4' | C3' | sing | 1.55Å | 1.53Å | |
C4' | H4' | sing | 1.09Å | 1.10Å | |
O4' | C1' | sing | 1.44Å | 1.48Å | |
C3' | O3' | sing | 1.43Å | 1.45Å | |
C3' | C2' | sing | 1.55Å | 1.56Å | |
C3' | H3' | sing | 1.09Å | 1.10Å | |
O3' | HA | sing | 0.97Å | 0.95Å | |
C2' | O2' | sing | 1.43Å | 1.46Å | |
C2' | C1' | sing | 1.54Å | 1.57Å | |
C2' | H2' | sing | 1.09Å | 1.10Å | |
O2' | HB | sing | 0.97Å | 0.95Å | |
C1' | N9 | sing | 1.47Å | 1.57Å | |
C1' | H1' | sing | 1.09Å | 1.10Å | |
N9 | C8 | sing | 1.36Å | 1.34Å | Aromatic |
N9 | C4 | sing | 1.37Å | 1.37Å | Aromatic |
C8 | N7 | doub | 1.30Å | 1.35Å | Aromatic |
C8 | H8 | sing | 1.08Å | 1.08Å | |
N7 | C5 | sing | 1.35Å | 1.33Å | Aromatic |
C5 | C4 | doub | 1.40Å | 1.39Å | Aromatic |
C5 | C6 | sing | 1.40Å | 1.40Å | Aromatic |
C4 | N3 | sing | 1.33Å | 1.36Å | Aromatic |
N3 | C2 | doub | 1.32Å | 1.33Å | Aromatic |
C2 | N1 | sing | 1.32Å | 1.38Å | Aromatic |
C2 | H2 | sing | 1.08Å | 1.08Å | |
N1 | C6 | doub | 1.33Å | 1.40Å | Aromatic |
C6 | N6 | sing | 1.38Å | 1.32Å | |
N6 | H6N1 | sing | 0.97Å | 1.00Å | |
N6 | H6N2 | sing | 0.97Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
PB | N3B | H3B1 | 109.4° | 106.7° |
PB | N3B | H3B2 | 109.5° | 106.7° |
N3B | PB | O2B | 104.0° | 109.4° |
N3B | PB | O1B | 112.0° | 109.5° |
N3B | PB | O3A | 101.8° | 109.5° |
H3B1 | N3B | H3B2 | 109.4° | 106.7° |
O2B | PB | O1B | 110.1° | 109.5° |
O2B | PB | O3A | 106.6° | 109.5° |
PB | O2B | HO2B | 109.5° | 106.8° |
O1B | PB | O3A | 120.8° | 109.5° |
PB | O3A | PA | 136.1° | 106.8° |
O3A | PA | O1A | 109.0° | 109.5° |
O3A | PA | O2A | 115.6° | 109.5° |
O3A | PA | O5' | 89.5° | 109.5° |
O1A | PA | O2A | 117.5° | 109.5° |
O1A | PA | O5' | 106.0° | 109.5° |
O2A | PA | O5' | 115.7° | 109.5° |
PA | O2A | HO2A | 109.5° | 106.8° |
PA | O5' | C5' | 118.6° | 106.8° |
O5' | C5' | C4' | 111.6° | 109.5° |
O5' | C5' | H5'1 | 108.3° | 109.5° |
O5' | C5' | H5'2 | 108.8° | 109.5° |
C4' | C5' | H5'1 | 108.3° | 109.5° |
C4' | C5' | H5'2 | 108.8° | 109.4° |
C5' | C4' | O4' | 100.9° | 110.3° |
C5' | C4' | C3' | 120.1° | 110.5° |
C5' | C4' | H4' | 107.1° | 110.3° |
H5'1 | C5' | H5'2 | 111.1° | 109.4° |
O4' | C4' | C3' | 104.6° | 104.8° |
O4' | C4' | H4' | 121.9° | 110.4° |
C4' | O4' | C1' | 112.3° | 105.2° |
C3' | C4' | H4' | 103.5° | 110.4° |
C4' | C3' | O3' | 112.9° | 110.5° |
C4' | C3' | C2' | 101.9° | 104.1° |
C4' | C3' | H3' | 113.3° | 110.5° |
O4' | C1' | C2' | 102.6° | 104.9° |
O4' | C1' | N9 | 115.6° | 110.4° |
O4' | C1' | H1' | 109.9° | 110.4° |
O3' | C3' | C2' | 112.3° | 110.6° |
O3' | C3' | H3' | 103.0° | 110.5° |
C3' | O3' | HA | 109.5° | 106.8° |
C2' | C3' | H3' | 113.8° | 110.6° |
C3' | C2' | O2' | 113.9° | 110.5° |
C3' | C2' | C1' | 103.5° | 104.0° |
C3' | C2' | H2' | 111.8° | 110.5° |
O2' | C2' | C1' | 112.8° | 110.8° |
O2' | C2' | H2' | 102.3° | 110.4° |
C2' | O2' | HB | 109.5° | 106.9° |
C1' | C2' | H2' | 112.9° | 110.4° |
C2' | C1' | N9 | 108.8° | 110.4° |
C2' | C1' | H1' | 116.6° | 110.4° |
N9 | C1' | H1' | 103.8° | 110.3° |
C1' | N9 | C8 | 123.5° | 126.3° |
C1' | N9 | C4 | 129.5° | 126.3° |
C8 | N9 | C4 | 107.0° | 107.4° |
N9 | C8 | N7 | 108.8° | 110.0° |
N9 | C8 | H8 | 125.6° | 125.0° |
N9 | C4 | C5 | 108.1° | 106.0° |
N9 | C4 | N3 | 134.3° | 134.9° |
N7 | C8 | H8 | 125.6° | 125.0° |
C8 | N7 | C5 | 109.9° | 109.4° |
N7 | C5 | C4 | 106.2° | 107.2° |
N7 | C5 | C6 | 133.0° | 134.7° |
C4 | C5 | C6 | 120.7° | 118.2° |
C5 | C4 | N3 | 117.6° | 119.1° |
C5 | C6 | N1 | 119.0° | 118.5° |
C5 | C6 | N6 | 120.8° | 120.8° |
C4 | N3 | C2 | 123.2° | 120.6° |
N3 | C2 | N1 | 121.1° | 122.5° |
N3 | C2 | H2 | 119.5° | 118.8° |
N1 | C2 | H2 | 119.4° | 118.7° |
C2 | N1 | C6 | 118.3° | 121.2° |
N1 | C6 | N6 | 120.1° | 120.7° |
C6 | N6 | H6N1 | 109.5° | 120.0° |
C6 | N6 | H6N2 | 109.5° | 120.0° |
H6N1 | N6 | H6N2 | 109.5° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
PB | N3B | H3B1 | H3B2 | 120.0° | 113.8° |
N3B | PB | O2B | O1B | 120.2° | 120.0° |
N3B | PB | O2B | O3A | 107.1° | 120.0° |
N3B | PB | O1B | O3A | 119.9° | 120.0° |
N3B | PB | O2B | HO2B | 16.5° | 60.0° |
N3B | PB | O3A | PA | 176.3° | 180.0° |
H3B1 | N3B | PB | O2B | 69.2° | 60.0° |
H3B1 | N3B | PB | O1B | 49.7° | 60.0° |
H3B1 | N3B | PB | O3A | 179.8° | 180.0° |
H3B2 | N3B | PB | O2B | 170.9° | 53.8° |
H3B2 | N3B | PB | O1B | 70.2° | 173.8° |
H3B2 | N3B | PB | O3A | 60.2° | 66.2° |
O2B | PB | O1B | O3A | 124.9° | 120.0° |
O2B | PB | O3A | PA | 75.0° | 60.0° |
O1B | PB | O2B | HO2B | 103.7° | 180.0° |
O1B | PB | O3A | PA | 51.5° | 60.0° |
O3A | PB | O2B | HO2B | 123.6° | 59.9° |
PB | O3A | PA | O1A | 108.6° | 40.0° |
PB | O3A | PA | O2A | 26.3° | 80.0° |
PB | O3A | PA | O5' | 144.7° | 160.0° |
O3A | PA | O1A | O2A | 133.9° | 120.0° |
O3A | PA | O1A | O5' | 95.1° | 120.0° |
O3A | PA | O2A | O5' | 102.7° | 120.0° |
O3A | PA | O2A | HO2A | 164.2° | 60.0° |
O3A | PA | O5' | C5' | 52.1° | 175.1° |
O1A | PA | O2A | O5' | 126.4° | 120.0° |
O1A | PA | O2A | HO2A | 64.9° | 180.0° |
O1A | PA | O5' | C5' | 161.7° | 55.0° |
O2A | PA | O5' | C5' | 66.2° | 65.0° |
O5' | PA | O2A | HO2A | 61.6° | 60.0° |
PA | O5' | C5' | C4' | 136.0° | 180.0° |
PA | O5' | C5' | H5'1 | 104.9° | 60.0° |
PA | O5' | C5' | H5'2 | 16.0° | 60.0° |
O5' | C5' | C4' | H5'1 | 119.1° | 120.1° |
O5' | C5' | C4' | H5'2 | 120.0° | 120.0° |
O5' | C5' | H5'1 | H5'2 | 119.4° | 120.0° |
O5' | C5' | C4' | O4' | 67.9° | 66.4° |
O5' | C5' | C4' | C3' | 46.2° | 178.2° |
O5' | C5' | C4' | H4' | 163.6° | 55.8° |
C4' | C5' | H5'1 | H5'2 | 119.4° | 119.9° |
C5' | C4' | O4' | C3' | 125.3° | 118.9° |
C5' | C4' | O4' | H4' | 118.2° | 122.2° |
C5' | C4' | C3' | H4' | 119.2° | 122.3° |
C5' | C4' | O4' | C1' | 141.4° | 159.5° |
C5' | C4' | C3' | O3' | 93.6° | 98.4° |
C5' | C4' | C3' | C2' | 145.7° | 142.9° |
C5' | C4' | C3' | H3' | 23.0° | 24.2° |
H5'1 | C5' | C4' | O4' | 51.2° | 173.5° |
H5'1 | C5' | C4' | C3' | 165.3° | 58.1° |
H5'1 | C5' | C4' | H4' | 77.3° | 64.3° |
H5'2 | C5' | C4' | O4' | 172.1° | 53.5° |
H5'2 | C5' | C4' | C3' | 73.8° | 61.8° |
H5'2 | C5' | C4' | H4' | 43.6° | 175.8° |
O4' | C4' | C3' | H4' | 128.6° | 118.9° |
O4' | C4' | C3' | O3' | 154.2° | 142.8° |
O4' | C4' | C3' | C2' | 33.5° | 24.1° |
O4' | C4' | C3' | H3' | 89.2° | 94.7° |
C4' | O4' | C1' | C2' | 8.5° | 40.5° |
C4' | O4' | C1' | N9 | 109.7° | 159.4° |
C4' | O4' | C1' | H1' | 133.2° | 78.4° |
C3' | C4' | O4' | C1' | 16.1° | 40.6° |
C4' | C3' | O3' | C2' | 114.5° | 114.7° |
C4' | C3' | O3' | H3' | 122.6° | 122.6° |
C4' | C3' | C2' | H3' | 122.3° | 118.7° |
C4' | C3' | O3' | HA | 156.3° | 180.0° |
C4' | C3' | C2' | O2' | 84.1° | 118.8° |
C4' | C3' | C2' | C1' | 38.8° | 0.2° |
C4' | C3' | C2' | H2' | 160.6° | 118.7° |
H4' | C4' | O4' | C1' | 100.5° | 78.3° |
H4' | C4' | C3' | O3' | 25.6° | 23.9° |
H4' | C4' | C3' | C2' | 95.1° | 94.8° |
H4' | C4' | C3' | H3' | 142.2° | 146.5° |
O4' | C1' | C2' | C3' | 29.2° | 23.9° |
O4' | C1' | C2' | O2' | 94.4° | 142.6° |
O4' | C1' | C2' | N9 | 122.9° | 118.9° |
O4' | C1' | C2' | H1' | 120.1° | 118.9° |
O4' | C1' | C2' | H2' | 150.2° | 94.7° |
O4' | C1' | N9 | H1' | 120.5° | 122.3° |
O4' | C1' | N9 | C8 | 22.9° | 22.0° |
O4' | C1' | N9 | C4 | 160.7° | 158.0° |
O3' | C3' | C2' | H3' | 116.6° | 122.7° |
O3' | C3' | C2' | O2' | 37.0° | 0.2° |
O3' | C3' | C2' | C1' | 159.9° | 118.8° |
O3' | C3' | C2' | H2' | 78.3° | 122.7° |
C2' | C3' | O3' | HA | 41.8° | 65.4° |
C3' | C2' | O2' | C1' | 117.6° | 114.8° |
C3' | C2' | O2' | H2' | 120.8° | 122.6° |
C3' | C2' | C1' | H2' | 121.1° | 118.6° |
C3' | C2' | O2' | HB | 107.7° | 61.4° |
C3' | C2' | C1' | N9 | 93.8° | 142.7° |
C3' | C2' | C1' | H1' | 149.3° | 95.0° |
H3' | C3' | O3' | HA | 81.1° | 57.4° |
H3' | C3' | C2' | O2' | 153.6° | 122.5° |
H3' | C3' | C2' | C1' | 83.5° | 118.5° |
H3' | C3' | C2' | H2' | 38.3° | 0.0° |
O2' | C2' | C1' | H2' | 115.4° | 122.7° |
O2' | C2' | C1' | N9 | 142.7° | 98.5° |
O2' | C2' | C1' | H1' | 25.7° | 23.7° |
C1' | C2' | O2' | HB | 134.7° | 176.1° |
C2' | C1' | N9 | H1' | 124.8° | 122.2° |
C2' | C1' | N9 | C8 | 91.8° | 93.5° |
C2' | C1' | N9 | C4 | 84.6° | 86.5° |
H2' | C2' | O2' | HB | 13.1° | 61.2° |
H2' | C2' | C1' | N9 | 27.3° | 24.2° |
H2' | C2' | C1' | H1' | 89.6° | 146.4° |
C1' | N9 | C8 | C4 | 177.1° | 180.0° |
C1' | N9 | C8 | N7 | 177.4° | 180.0° |
C1' | N9 | C8 | H8 | 2.6° | 0.0° |
C1' | N9 | C4 | C5 | 176.6° | 179.8° |
C1' | N9 | C4 | N3 | 1.4° | 0.0° |
H1' | C1' | N9 | C8 | 143.4° | 144.3° |
H1' | C1' | N9 | C4 | 40.2° | 35.7° |
N9 | C8 | N7 | H8 | 180.0° | 180.0° |
N9 | C8 | N7 | C5 | 0.8° | 0.2° |
C8 | N9 | C4 | C5 | 0.3° | 0.2° |
C8 | N9 | C4 | N3 | 178.3° | 179.9° |
C4 | N9 | C8 | N7 | 0.2° | 0.0° |
C4 | N9 | C8 | H8 | 179.7° | 180.0° |
N9 | C4 | C5 | N7 | 0.8° | 0.4° |
N9 | C4 | C5 | N3 | 178.3° | 179.9° |
N9 | C4 | C5 | C6 | 179.4° | 179.7° |
N9 | C4 | N3 | C2 | 179.0° | 180.0° |
C8 | N7 | C5 | C4 | 0.9° | 0.4° |
C8 | N7 | C5 | C6 | 179.3° | 179.5° |
H8 | C8 | N7 | C5 | 179.2° | 179.8° |
N7 | C5 | C4 | C6 | 179.8° | 179.3° |
N7 | C5 | C4 | N3 | 179.1° | 179.8° |
N7 | C5 | C6 | N1 | 179.5° | 179.5° |
N7 | C5 | C6 | N6 | 0.4° | 0.7° |
C5 | C4 | N3 | C2 | 1.2° | 0.2° |
C4 | C5 | C6 | N1 | 0.2° | 0.5° |
C4 | C5 | C6 | N6 | 179.3° | 179.7° |
C6 | C5 | C4 | N3 | 1.1° | 0.5° |
C5 | C6 | N1 | C2 | 1.4° | 0.3° |
C5 | C6 | N1 | N6 | 179.1° | 179.8° |
C5 | C6 | N6 | H6N1 | 74.4° | 179.8° |
C5 | C6 | N6 | H6N2 | 45.7° | 0.6° |
C4 | N3 | C2 | N1 | 0.0° | 0.0° |
C4 | N3 | C2 | H2 | 180.0° | 180.0° |
N3 | C2 | N1 | H2 | 180.0° | 180.0° |
N3 | C2 | N1 | C6 | 1.3° | 0.0° |
C2 | N1 | C6 | N6 | 179.5° | 180.0° |
H2 | C2 | N1 | C6 | 178.7° | 180.0° |
N1 | C6 | N6 | H6N1 | 106.5° | 0.0° |
N1 | C6 | N6 | H6N2 | 133.4° | 179.7° |
C6 | N6 | H6N1 | H6N2 | 120.0° | 179.6° |