AMN
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | C2 | sing | 1.51Å | 1.55Å | |
C1 | O1A | doub | 1.21Å | 1.23Å | |
C1 | O1B | sing | 1.34Å | 1.24Å | |
C2 | C3 | sing | 1.53Å | 1.55Å | |
C2 | O2 | sing | 1.43Å | 1.44Å | |
C2 | O6 | sing | 1.43Å | 1.44Å | |
C3 | C4 | sing | 1.53Å | 1.52Å | |
C3 | H32 | sing | 1.09Å | 1.11Å | |
C3 | H31 | sing | 1.09Å | 1.11Å | |
C4 | C5 | sing | 1.53Å | 1.55Å | |
C4 | O4 | sing | 1.43Å | 1.43Å | |
C4 | H4 | sing | 1.09Å | 1.11Å | |
C5 | C6 | sing | 1.53Å | 1.53Å | |
C5 | N5 | sing | 1.46Å | 1.45Å | |
C5 | H5 | sing | 1.09Å | 1.11Å | |
C6 | C7 | sing | 1.53Å | 1.52Å | |
C6 | O6 | sing | 1.43Å | 1.42Å | |
C6 | H6 | sing | 1.09Å | 1.12Å | |
C7 | C8 | sing | 1.53Å | 1.54Å | |
C7 | O7 | sing | 1.43Å | 1.41Å | |
C7 | H7 | sing | 1.09Å | 1.12Å | |
C8 | C9 | sing | 1.53Å | 1.52Å | |
C8 | O8 | sing | 1.43Å | 1.40Å | |
C8 | H8 | sing | 1.09Å | 1.11Å | |
C9 | N9 | sing | 1.47Å | 1.48Å | |
C9 | H92 | sing | 1.09Å | 1.11Å | |
C9 | H91 | sing | 1.09Å | 1.12Å | |
C10 | C11 | sing | 1.51Å | 1.52Å | |
C10 | N5 | sing | 1.35Å | 1.32Å | |
C10 | O10 | doub | 1.21Å | 1.23Å | |
C11 | H111 | sing | 1.09Å | 1.12Å | |
C11 | H113 | sing | 1.09Å | 1.11Å | |
C11 | H112 | sing | 1.09Å | 1.12Å | |
C12 | O2 | sing | 1.43Å | 1.44Å | |
C12 | H121 | sing | 1.09Å | 1.11Å | |
C12 | H122 | sing | 1.09Å | 1.12Å | |
C12 | H123 | sing | 1.09Å | 1.12Å | |
N5 | HN5 | sing | 0.97Å | 1.02Å | |
N9 | HN91 | sing | 1.01Å | 1.02Å | |
N9 | HN92 | sing | 1.01Å | 1.02Å | |
O1B | HO1B | sing | 0.97Å | 0.95Å | |
O4 | HO4 | sing | 0.97Å | 0.95Å | |
O7 | HO7 | sing | 0.97Å | 0.95Å | |
O8 | HO8 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | C1 | O1A | 118.3° | 120.0° |
C2 | C1 | O1B | 121.4° | 120.0° |
C1 | C2 | C3 | 110.1° | 109.4° |
C1 | C2 | O2 | 107.7° | 109.4° |
C1 | C2 | O6 | 111.5° | 109.3° |
O1A | C1 | O1B | 120.3° | 120.0° |
C1 | O1B | HO1B | 121.4° | 120.0° |
C3 | C2 | O2 | 109.8° | 109.4° |
C3 | C2 | O6 | 109.0° | 109.8° |
C2 | C3 | C4 | 112.1° | 109.0° |
C2 | C3 | H32 | 111.2° | 109.6° |
C2 | C3 | H31 | 111.2° | 109.5° |
O2 | C2 | O6 | 108.6° | 109.4° |
C2 | O2 | C12 | 115.9° | 106.8° |
C2 | O6 | C6 | 118.5° | 107.6° |
C4 | C3 | H32 | 111.3° | 109.5° |
C4 | C3 | H31 | 111.2° | 109.5° |
C3 | C4 | C5 | 108.6° | 108.7° |
C3 | C4 | O4 | 113.2° | 109.6° |
C3 | C4 | H4 | 107.9° | 109.6° |
H32 | C3 | H31 | 99.2° | 109.6° |
C5 | C4 | O4 | 110.7° | 109.8° |
C5 | C4 | H4 | 110.6° | 109.6° |
C4 | C5 | C6 | 108.5° | 109.0° |
C4 | C5 | N5 | 106.4° | 109.6° |
C4 | C5 | H5 | 113.1° | 109.5° |
O4 | C4 | H4 | 105.8° | 109.6° |
C4 | O4 | HO4 | 113.2° | 106.8° |
C6 | C5 | N5 | 112.1° | 109.6° |
C6 | C5 | H5 | 107.4° | 109.5° |
C5 | C6 | C7 | 118.9° | 109.5° |
C5 | C6 | O6 | 109.1° | 109.9° |
C5 | C6 | H6 | 101.9° | 109.4° |
N5 | C5 | H5 | 109.5° | 109.5° |
C5 | N5 | C10 | 123.1° | 120.0° |
C5 | N5 | HN5 | 123.3° | 120.0° |
C7 | C6 | O6 | 105.5° | 109.4° |
C7 | C6 | H6 | 105.7° | 109.3° |
C6 | C7 | C8 | 110.5° | 109.5° |
C6 | C7 | O7 | 109.5° | 109.4° |
C6 | C7 | H7 | 108.6° | 109.5° |
O6 | C6 | H6 | 116.2° | 109.4° |
C8 | C7 | O7 | 108.8° | 109.4° |
C8 | C7 | H7 | 109.2° | 109.6° |
C7 | C8 | C9 | 111.4° | 109.5° |
C7 | C8 | O8 | 113.4° | 109.4° |
C7 | C8 | H8 | 104.9° | 109.6° |
O7 | C7 | H7 | 110.2° | 109.4° |
C7 | O7 | HO7 | 109.5° | 106.8° |
C9 | C8 | O8 | 107.7° | 109.4° |
C9 | C8 | H8 | 110.8° | 109.5° |
C8 | C9 | N9 | 103.1° | 109.5° |
C8 | C9 | H92 | 114.6° | 109.4° |
C8 | C9 | H91 | 114.6° | 109.5° |
O8 | C8 | H8 | 108.7° | 109.4° |
C8 | O8 | HO8 | 113.4° | 106.8° |
N9 | C9 | H92 | 114.6° | 109.5° |
N9 | C9 | H91 | 114.6° | 109.5° |
C9 | N9 | HN91 | 103.2° | 106.7° |
C9 | N9 | HN92 | 114.6° | 106.7° |
H92 | C9 | H91 | 95.9° | 109.4° |
C11 | C10 | N5 | 118.0° | 120.0° |
C11 | C10 | O10 | 121.8° | 120.0° |
C10 | C11 | H111 | 118.1° | 109.4° |
C10 | C11 | H113 | 109.1° | 109.5° |
C10 | C11 | H112 | 109.1° | 109.4° |
N5 | C10 | O10 | 120.1° | 120.0° |
C10 | N5 | HN5 | 113.6° | 120.0° |
H111 | C11 | H113 | 109.1° | 109.5° |
H111 | C11 | H112 | 109.1° | 109.5° |
H113 | C11 | H112 | 101.0° | 109.5° |
O2 | C12 | H121 | 115.9° | 109.5° |
O2 | C12 | H122 | 109.9° | 109.5° |
O2 | C12 | H123 | 109.9° | 109.5° |
H121 | C12 | H122 | 109.9° | 109.4° |
H121 | C12 | H123 | 109.9° | 109.4° |
H122 | C12 | H123 | 100.3° | 109.5° |
HN91 | N9 | HN92 | 114.6° | 106.7° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | C1 | O1A | O1B | 179.5° | 180.0° |
C1 | C2 | C3 | O2 | 118.4° | 119.9° |
C1 | C2 | C3 | O6 | 122.6° | 120.0° |
C1 | C2 | O2 | O6 | 120.9° | 119.8° |
C1 | C2 | C3 | C4 | 72.5° | 58.8° |
C1 | C2 | C3 | H32 | 162.3° | 178.6° |
C1 | C2 | C3 | H31 | 52.8° | 61.1° |
C1 | C2 | O6 | C6 | 68.2° | 52.5° |
C1 | C2 | O2 | C12 | 61.7° | 62.8° |
C2 | C1 | O1B | HO1B | 180.0° | 180.0° |
O1A | C1 | C2 | C3 | 46.5° | 143.4° |
O1A | C1 | C2 | O2 | 73.3° | 96.7° |
O1A | C1 | C2 | O6 | 167.7° | 23.2° |
O1A | C1 | O1B | HO1B | 0.5° | 0.1° |
O1B | C1 | C2 | C3 | 133.1° | 36.6° |
O1B | C1 | C2 | O2 | 107.2° | 83.3° |
O1B | C1 | C2 | O6 | 11.9° | 156.9° |
C3 | C2 | O2 | O6 | 119.2° | 120.3° |
C2 | C3 | C4 | H32 | 125.2° | 119.9° |
C2 | C3 | C4 | H31 | 125.2° | 119.9° |
C2 | C3 | H32 | H31 | 117.1° | 120.3° |
C2 | C3 | C4 | C5 | 55.3° | 53.7° |
C2 | C3 | C4 | O4 | 178.7° | 173.7° |
C2 | C3 | C4 | H4 | 64.6° | 66.0° |
C3 | C2 | O6 | C6 | 53.6° | 67.5° |
C3 | C2 | O2 | C12 | 178.4° | 177.3° |
O2 | C2 | C3 | C4 | 169.1° | 178.6° |
O2 | C2 | C3 | H32 | 43.9° | 61.5° |
O2 | C2 | C3 | H31 | 65.6° | 58.8° |
O2 | C2 | O6 | C6 | 173.3° | 172.4° |
C2 | O2 | C12 | H121 | 180.0° | 174.4° |
C2 | O2 | C12 | H122 | 54.7° | 54.4° |
C2 | O2 | C12 | H123 | 54.7° | 65.6° |
O6 | C2 | C3 | C4 | 50.2° | 61.3° |
O6 | C2 | C3 | H32 | 75.1° | 58.6° |
O6 | C2 | C3 | H31 | 175.4° | 178.9° |
C2 | O6 | C6 | C5 | 59.1° | 67.5° |
C2 | O6 | C6 | C7 | 172.0° | 172.3° |
C2 | O6 | C6 | H6 | 55.3° | 52.6° |
O6 | C2 | O2 | C12 | 59.2° | 57.0° |
C4 | C3 | H32 | H31 | 117.2° | 120.2° |
C3 | C4 | C5 | O4 | 124.9° | 119.9° |
C3 | C4 | C5 | H4 | 118.3° | 119.7° |
C3 | C4 | O4 | H4 | 118.0° | 120.3° |
C3 | C4 | C5 | C6 | 58.8° | 53.7° |
C3 | C4 | C5 | N5 | 179.6° | 173.7° |
C3 | C4 | C5 | H5 | 60.2° | 66.2° |
C3 | C4 | O4 | HO4 | 180.0° | 60.0° |
H32 | C3 | C4 | C5 | 69.9° | 66.2° |
H32 | C3 | C4 | O4 | 53.4° | 53.7° |
H32 | C3 | C4 | H4 | 170.2° | 174.0° |
H31 | C3 | C4 | C5 | 179.4° | 173.6° |
H31 | C3 | C4 | O4 | 56.1° | 66.5° |
H31 | C3 | C4 | H4 | 60.7° | 53.8° |
C5 | C4 | O4 | H4 | 119.8° | 120.4° |
C4 | C5 | C6 | N5 | 117.2° | 120.0° |
C4 | C5 | C6 | H5 | 122.5° | 119.8° |
C4 | C5 | N5 | H5 | 122.5° | 120.2° |
C4 | C5 | C6 | C7 | 179.8° | 178.7° |
C4 | C5 | C6 | O6 | 58.8° | 61.2° |
C4 | C5 | C6 | H6 | 64.6° | 58.9° |
C4 | C5 | N5 | C10 | 139.9° | 90.0° |
C4 | C5 | N5 | HN5 | 40.2° | 90.0° |
C5 | C4 | O4 | HO4 | 57.8° | 179.3° |
O4 | C4 | C5 | C6 | 176.3° | 173.5° |
O4 | C4 | C5 | N5 | 55.5° | 66.5° |
O4 | C4 | C5 | H5 | 64.7° | 53.7° |
H4 | C4 | C5 | C6 | 59.4° | 66.1° |
H4 | C4 | C5 | N5 | 61.4° | 53.9° |
H4 | C4 | C5 | H5 | 178.4° | 174.1° |
H4 | C4 | O4 | HO4 | 62.0° | 60.3° |
C6 | C5 | N5 | H5 | 119.0° | 120.2° |
C5 | C6 | C7 | O6 | 122.8° | 120.4° |
C5 | C6 | C7 | H6 | 113.6° | 119.8° |
C5 | C6 | O6 | H6 | 114.4° | 120.1° |
C5 | C6 | C7 | C8 | 170.4° | 180.0° |
C5 | C6 | C7 | O7 | 50.6° | 60.0° |
C5 | C6 | C7 | H7 | 69.8° | 59.9° |
C6 | C5 | N5 | C10 | 101.7° | 150.4° |
C6 | C5 | N5 | HN5 | 78.3° | 29.6° |
N5 | C5 | C6 | C7 | 63.0° | 58.7° |
N5 | C5 | C6 | O6 | 176.0° | 178.8° |
N5 | C5 | C6 | H6 | 52.6° | 61.0° |
C5 | N5 | C10 | C11 | 174.4° | 180.0° |
C5 | N5 | C10 | HN5 | 180.0° | 180.0° |
C5 | N5 | C10 | O10 | 8.5° | 0.0° |
H5 | C5 | C6 | C7 | 57.2° | 61.5° |
H5 | C5 | C6 | O6 | 63.7° | 58.6° |
H5 | C5 | C6 | H6 | 172.9° | 178.7° |
H5 | C5 | N5 | C10 | 17.3° | 30.2° |
H5 | C5 | N5 | HN5 | 162.7° | 149.8° |
C7 | C6 | O6 | H6 | 116.7° | 119.7° |
C6 | C7 | C8 | O7 | 120.2° | 119.9° |
C6 | C7 | C8 | H7 | 119.4° | 120.1° |
C6 | C7 | O7 | H7 | 119.4° | 120.0° |
C6 | C7 | C8 | C9 | 177.8° | 180.0° |
C6 | C7 | C8 | O8 | 56.1° | 60.1° |
C6 | C7 | C8 | H8 | 62.3° | 59.9° |
C6 | C7 | O7 | HO7 | 180.0° | 60.0° |
O6 | C6 | C7 | C8 | 47.6° | 59.5° |
O6 | C6 | C7 | O7 | 72.2° | 60.4° |
O6 | C6 | C7 | H7 | 167.4° | 179.7° |
H6 | C6 | C7 | C8 | 76.0° | 60.2° |
H6 | C6 | C7 | O7 | 164.2° | 179.8° |
H6 | C6 | C7 | H7 | 43.8° | 59.9° |
C8 | C7 | O7 | H7 | 119.7° | 120.0° |
C7 | C8 | C9 | O8 | 124.9° | 119.9° |
C7 | C8 | C9 | H8 | 116.3° | 120.2° |
C7 | C8 | O8 | H8 | 116.2° | 120.1° |
C7 | C8 | C9 | N9 | 166.4° | 180.0° |
C7 | C8 | C9 | H92 | 68.3° | 60.1° |
C7 | C8 | C9 | H91 | 41.2° | 59.8° |
C8 | C7 | O7 | HO7 | 59.2° | 60.0° |
C7 | C8 | O8 | HO8 | 179.9° | 60.0° |
O7 | C7 | C8 | C9 | 62.0° | 60.1° |
O7 | C7 | C8 | O8 | 176.3° | 180.0° |
O7 | C7 | C8 | H8 | 57.9° | 60.1° |
H7 | C7 | C8 | C9 | 58.4° | 59.8° |
H7 | C7 | C8 | O8 | 63.3° | 60.1° |
H7 | C7 | C8 | H8 | 178.3° | 180.0° |
H7 | C7 | O7 | HO7 | 60.6° | 180.0° |
C9 | C8 | O8 | H8 | 120.1° | 120.0° |
C8 | C9 | N9 | H92 | 125.3° | 119.9° |
C8 | C9 | N9 | H91 | 125.3° | 120.1° |
C8 | C9 | H92 | H91 | 120.5° | 120.0° |
C8 | C9 | N9 | HN91 | 180.0° | 180.0° |
C8 | C9 | N9 | HN92 | 54.8° | 66.3° |
C9 | C8 | O8 | HO8 | 56.3° | 60.0° |
O8 | C8 | C9 | N9 | 41.5° | 60.1° |
O8 | C8 | C9 | H92 | 166.8° | 180.0° |
O8 | C8 | C9 | H91 | 83.7° | 60.1° |
H8 | C8 | C9 | N9 | 77.2° | 59.9° |
H8 | C8 | C9 | H92 | 48.0° | 60.1° |
H8 | C8 | C9 | H91 | 157.5° | 180.0° |
H8 | C8 | O8 | HO8 | 63.9° | 180.0° |
N9 | C9 | H92 | H91 | 120.5° | 120.0° |
C9 | N9 | HN91 | HN92 | 125.3° | 113.7° |
H92 | C9 | N9 | HN91 | 54.7° | 60.0° |
H92 | C9 | N9 | HN92 | 70.5° | 173.8° |
H91 | C9 | N9 | HN91 | 54.7° | 59.9° |
H91 | C9 | N9 | HN92 | 180.0° | 53.9° |
C11 | C10 | N5 | O10 | 177.1° | 180.0° |
C10 | C11 | H111 | H113 | 125.3° | 120.1° |
C10 | C11 | H111 | H112 | 125.2° | 119.9° |
C10 | C11 | H113 | H112 | 114.8° | 120.0° |
C11 | C10 | N5 | HN5 | 5.6° | 0.0° |
N5 | C10 | C11 | H111 | 180.0° | 180.0° |
N5 | C10 | C11 | H113 | 54.7° | 60.0° |
N5 | C10 | C11 | H112 | 54.7° | 60.0° |
O10 | C10 | C11 | H111 | 3.0° | 0.0° |
O10 | C10 | C11 | H113 | 128.3° | 120.0° |
O10 | C10 | C11 | H112 | 122.3° | 120.0° |
O10 | C10 | N5 | HN5 | 171.5° | 180.0° |
H111 | C11 | H113 | H112 | 114.8° | 120.0° |
O2 | C12 | H121 | H122 | 125.3° | 120.0° |
O2 | C12 | H121 | H123 | 125.3° | 120.0° |
O2 | C12 | H122 | H123 | 115.7° | 120.1° |
H121 | C12 | H122 | H123 | 115.6° | 120.0° |