Obsolete: AMA

AMA was replaced with PLA on

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N1	C2	doub	1.32Å	1.33Å	Aromatic
N1	C6	sing	1.32Å	1.35Å	Aromatic
C2	C2A	sing	1.51Å	1.49Å
C2	C3	sing	1.39Å	1.41Å	Aromatic
C2A	H2A1	sing	1.09Å	1.11Å
C2A	H2A2	sing	1.09Å	1.11Å
C2A	H2A3	sing	1.09Å	1.12Å
C3	O3	sing	1.36Å	1.31Å
C3	C4	doub	1.39Å	1.40Å	Aromatic
O3	HO3	sing	0.97Å	0.95Å
C4	C4A	sing	1.51Å	1.44Å
C4	C5	sing	1.39Å	1.37Å	Aromatic
C4A	N	sing	1.47Å	1.40Å
C4A	H4A1	sing	1.09Å	1.12Å
C4A	H4A2	sing	1.09Å	1.12Å
C5	C6	doub	1.38Å	1.40Å	Aromatic
C5	C5A	sing	1.51Å	1.49Å
C6	H6	sing	1.08Å	1.10Å
C5A	OP4	sing	1.43Å	1.44Å
C5A	H5A1	sing	1.09Å	1.12Å
C5A	H5A2	sing	1.09Å	1.12Å
OP4	P	sing	1.61Å	1.56Å
P	OP1	doub	1.48Å	1.50Å
P	OP2	sing	1.61Å	1.58Å
P	OP3	sing	1.61Å	1.48Å
OP2	HOP2	sing	0.97Å	0.95Å
OP3	HOP3	sing	0.97Å	0.95Å
N	CA	sing	1.47Å	1.47Å
N	HN	sing	1.01Å	1.02Å
CA	C	sing	1.51Å	1.53Å
CA	CB2	sing	1.53Å	1.51Å
CA	CB1	sing	1.53Å	1.51Å
C	O	doub	1.21Å	1.23Å
C	OXT	sing	1.34Å	1.24Å
CB2	HB21	sing	1.09Å	1.12Å
CB2	HB22	sing	1.09Å	1.11Å
CB2	HB23	sing	1.09Å	1.12Å
CB1	CG	sing	1.51Å	1.52Å
CB1	HB11	sing	1.09Å	1.12Å
CB1	HB12	sing	1.09Å	1.12Å
CG	OD1	doub	1.21Å	1.25Å
CG	OD2	sing	1.34Å	1.26Å
OD2	HD2	sing	0.97Å	0.95Å
OXT	HXT	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C2	N1	C6	125.8°	121.8°
N1	C2	C2A	119.6°	119.7°
N1	C2	C3	117.0°	120.7°
N1	C6	C5	118.4°	120.8°
N1	C6	H6	119.3°	119.6°
C2A	C2	C3	123.4°	119.6°
C2	C2A	H2A1	119.6°	109.5°
C2	C2A	H2A2	108.5°	109.5°
C2	C2A	H2A3	108.5°	109.4°
C2	C3	O3	118.4°	120.4°
C2	C3	C4	118.9°	119.1°
H2A1	C2A	H2A2	108.6°	109.5°
H2A1	C2A	H2A3	108.6°	109.5°
H2A2	C2A	H2A3	101.5°	109.4°
O3	C3	C4	122.7°	120.5°
C3	O3	HO3	118.3°	106.8°
C3	C4	C4A	117.1°	120.9°
C3	C4	C5	121.6°	118.4°
C4A	C4	C5	121.2°	120.8°
C4	C4A	N	119.9°	109.5°
C4	C4A	H4A1	108.4°	109.4°
C4	C4A	H4A2	108.5°	109.5°
C4	C5	C6	118.3°	119.2°
C4	C5	C5A	126.5°	120.4°
N	C4A	H4A1	108.5°	109.5°
N	C4A	H4A2	108.5°	109.5°
C4A	N	CA	120.9°	106.7°
C4A	N	HN	108.1°	106.7°
H4A1	C4A	H4A2	101.4°	109.5°
C6	C5	C5A	115.3°	120.4°
C5	C6	H6	122.3°	119.5°
C5	C5A	OP4	115.5°	109.5°
C5	C5A	H5A1	110.1°	109.5°
C5	C5A	H5A2	110.1°	109.4°
OP4	C5A	H5A1	110.0°	109.5°
OP4	C5A	H5A2	110.0°	109.4°
C5A	OP4	P	119.4°	106.9°
H5A1	C5A	H5A2	100.2°	109.4°
OP4	P	OP1	103.2°	109.4°
OP4	P	OP2	109.7°	109.5°
OP4	P	OP3	108.6°	109.5°
OP1	P	OP2	112.1°	109.5°
OP1	P	OP3	118.3°	109.4°
OP2	P	OP3	104.8°	109.5°
P	OP2	HOP2	109.6°	106.8°
P	OP3	HOP3	108.6°	106.7°
CA	N	HN	108.1°	106.8°
N	CA	C	108.5°	109.5°
N	CA	CB2	117.6°	109.4°
N	CA	CB1	111.8°	109.5°
C	CA	CB2	110.4°	109.6°
C	CA	CB1	112.2°	109.4°
CA	C	O	122.7°	120.0°
CA	C	OXT	119.7°	120.0°
CB2	CA	CB1	95.9°	109.4°
CA	CB2	HB21	117.6°	109.6°
CA	CB2	HB22	109.3°	109.4°
CA	CB2	HB23	109.3°	109.5°
CA	CB1	CG	117.7°	109.5°
CA	CB1	HB11	109.3°	109.4°
CA	CB1	HB12	109.3°	109.5°
O	C	OXT	117.5°	120.0°
C	OXT	HXT	119.7°	120.0°
HB21	CB2	HB22	109.3°	109.4°
HB21	CB2	HB23	109.2°	109.4°
HB22	CB2	HB23	100.8°	109.5°
CG	CB1	HB11	109.2°	109.5°
CG	CB1	HB12	109.2°	109.5°
CB1	CG	OD1	124.3°	120.0°
CB1	CG	OD2	114.7°	120.0°
HB11	CB1	HB12	100.8°	109.4°
OD1	CG	OD2	121.0°	120.0°
CG	OD2	HD2	114.7°	120.1°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
N1	C2	C2A	C3	179.9°	179.7°
N1	C2	C2A	H2A1	180.0°	89.9°
N1	C2	C2A	H2A2	54.7°	150.0°
N1	C2	C2A	H2A3	54.8°	30.1°
N1	C2	C3	O3	179.3°	180.0°
N1	C2	C3	C4	0.3°	0.5°
C2	N1	C6	C5	0.4°	0.1°
C2	N1	C6	H6	179.6°	180.0°
C6	N1	C2	C2A	179.7°	180.0°
C6	N1	C2	C3	0.4°	0.3°
N1	C6	C5	C4	0.3°	0.1°
N1	C6	C5	H6	180.0°	179.9°
N1	C6	C5	C5A	179.7°	180.0°
C2	C2A	H2A1	H2A2	125.2°	120.0°
C2	C2A	H2A1	H2A3	125.2°	120.0°
C2	C2A	H2A2	H2A3	114.2°	119.9°
C2A	C2	C3	O3	0.6°	0.3°
C2A	C2	C3	C4	179.6°	179.8°
C3	C2	C2A	H2A1	0.1°	90.3°
C3	C2	C2A	H2A2	125.3°	29.7°
C3	C2	C2A	H2A3	125.2°	149.6°
C2	C3	O3	C4	179.0°	179.5°
C2	C3	O3	HO3	180.0°	90.6°
C2	C3	C4	C4A	178.6°	179.7°
C2	C3	C4	C5	0.9°	0.5°
H2A1	C2A	H2A2	H2A3	114.3°	120.0°
O3	C3	C4	C4A	2.4°	0.2°
O3	C3	C4	C5	179.9°	179.9°
C4	C3	O3	HO3	1.0°	89.9°
C3	C4	C4A	C5	177.6°	179.9°
C3	C4	C4A	N	8.5°	89.8°
C3	C4	C4A	H4A1	116.8°	30.2°
C3	C4	C4A	H4A2	133.8°	150.2°
C3	C4	C5	C6	0.9°	0.2°
C3	C4	C5	C5A	179.0°	179.7°
C4	C4A	N	H4A1	125.3°	120.0°
C4	C4A	N	H4A2	125.3°	120.0°
C4	C4A	H4A1	H4A2	114.1°	120.0°
C4A	C4	C5	C6	178.5°	180.0°
C4A	C4	C5	C5A	1.5°	0.2°
C4	C4A	N	CA	178.3°	179.9°
C4	C4A	N	HN	56.5°	66.2°
C5	C4	C4A	N	169.2°	90.1°
C5	C4	C4A	H4A1	65.5°	149.9°
C5	C4	C4A	H4A2	43.8°	29.9°
C4	C5	C6	C5A	179.9°	179.8°
C4	C5	C6	H6	179.7°	180.0°
C4	C5	C5A	OP4	42.6°	179.9°
C4	C5	C5A	H5A1	167.8°	59.8°
C4	C5	C5A	H5A2	82.7°	60.1°
N	C4A	H4A1	H4A2	114.2°	120.0°
C4A	N	CA	HN	125.2°	113.8°
C4A	N	CA	C	153.9°	60.1°
C4A	N	CA	CB2	79.9°	60.1°
C4A	N	CA	CB1	29.6°	180.0°
H4A1	C4A	N	CA	56.5°	60.0°
H4A1	C4A	N	HN	68.7°	173.8°
H4A2	C4A	N	CA	52.9°	60.0°
H4A2	C4A	N	HN	178.2°	53.8°
C6	C5	C5A	OP4	137.5°	0.1°
C6	C5	C5A	H5A1	12.3°	120.0°
C6	C5	C5A	H5A2	97.2°	120.0°
C5A	C5	C6	H6	0.3°	0.1°
C5	C5A	OP4	H5A1	125.3°	120.1°
C5	C5A	OP4	H5A2	125.3°	119.9°
C5	C5A	H5A1	H5A2	115.9°	120.0°
C5	C5A	OP4	P	160.8°	180.0°
OP4	C5A	H5A1	H5A2	115.8°	119.9°
C5A	OP4	P	OP1	146.8°	60.0°
C5A	OP4	P	OP2	27.2°	180.0°
C5A	OP4	P	OP3	86.8°	59.9°
H5A1	C5A	OP4	P	35.5°	59.9°
H5A2	C5A	OP4	P	73.9°	60.0°
OP4	P	OP1	OP2	118.0°	120.0°
OP4	P	OP1	OP3	119.9°	120.0°
OP4	P	OP2	OP3	116.4°	120.1°
OP4	P	OP2	HOP2	180.0°	180.0°
OP4	P	OP3	HOP3	180.0°	60.1°
OP1	P	OP2	OP3	129.5°	120.0°
OP1	P	OP2	HOP2	65.9°	60.1°
OP1	P	OP3	HOP3	62.9°	180.0°
OP2	P	OP3	HOP3	62.9°	60.0°
OP3	P	OP2	HOP2	63.6°	60.0°
N	CA	C	CB2	130.3°	120.1°
N	CA	C	CB1	124.1°	120.0°
N	CA	CB2	CB1	118.4°	119.9°
N	CA	C	O	179.6°	150.0°
N	CA	C	OXT	1.0°	29.9°
N	CA	CB2	HB21	180.0°	60.0°
N	CA	CB2	HB22	54.7°	180.0°
N	CA	CB2	HB23	54.7°	60.1°
N	CA	CB1	CG	64.9°	180.0°
N	CA	CB1	HB11	169.8°	59.9°
N	CA	CB1	HB12	60.4°	60.0°
HN	N	CA	C	80.9°	173.8°
HN	N	CA	CB2	45.3°	53.7°
HN	N	CA	CB1	154.8°	66.2°
C	CA	CB2	CB1	116.3°	119.9°
CA	C	O	OXT	179.4°	179.9°
C	CA	CB2	HB21	54.7°	179.9°
C	CA	CB2	HB22	70.6°	59.9°
C	CA	CB2	HB23	180.0°	60.0°
C	CA	CB1	CG	57.3°	60.0°
C	CA	CB1	HB11	68.0°	180.0°
C	CA	CB1	HB12	177.4°	60.0°
CA	C	OXT	HXT	180.0°	179.9°
CB2	CA	C	O	49.3°	29.9°
CB2	CA	C	OXT	131.2°	150.0°
CA	CB2	HB21	HB22	125.3°	120.0°
CA	CB2	HB21	HB23	125.3°	120.1°
CA	CB2	HB22	HB23	115.0°	120.0°
CB2	CA	CB1	CG	172.2°	60.0°
CB2	CA	CB1	HB11	46.9°	60.0°
CB2	CA	CB1	HB12	62.5°	179.9°
CB1	CA	C	O	56.3°	90.0°
CB1	CA	C	OXT	123.1°	90.1°
CB1	CA	CB2	HB21	61.6°	60.0°
CB1	CA	CB2	HB22	173.1°	60.0°
CB1	CA	CB2	HB23	63.6°	180.0°
CA	CB1	CG	HB11	125.3°	120.0°
CA	CB1	CG	HB12	125.3°	120.0°
CA	CB1	HB11	HB12	115.0°	119.9°
CA	CB1	CG	OD1	40.1°	0.0°
CA	CB1	CG	OD2	138.4°	180.0°
O	C	OXT	HXT	0.5°	0.0°
HB21	CB2	HB22	HB23	115.0°	119.9°
CG	CB1	HB11	HB12	114.9°	120.0°
CB1	CG	OD1	OD2	178.4°	179.9°
CB1	CG	OD2	HD2	180.0°	179.9°
HB11	CB1	CG	OD1	85.2°	120.0°
HB11	CB1	CG	OD2	96.3°	60.0°
HB12	CB1	CG	OD1	165.4°	120.0°
HB12	CB1	CG	OD2	13.1°	60.0°
OD1	CG	OD2	HD2	1.5°	0.0°

Definition date:	1999-07-08
Last modified:	2008-10-14
Release status:	OBS
Processing site:	RCSB
Replaced by:	PLA
Derived from:	1AMA