Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

AL5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C3S1sing1.76Å1.73Å
C3C4doub1.36Å1.38ÅAromatic
C3S2sing1.78Å1.73ÅAromatic
C9C10sing1.51Å1.51Å
C9N8sing1.46Å1.46Å
C9H91sing1.09Å1.12Å
C9H92sing1.09Å1.11Å
C10C11doub1.38Å1.41ÅAromatic
C10C15sing1.38Å1.39ÅAromatic
C11C12sing1.38Å1.40ÅAromatic
C11H11sing1.08Å1.10Å
C12C13doub1.38Å1.40ÅAromatic
C12H12sing1.08Å1.10Å
C13C14sing1.38Å1.39ÅAromatic
C13C16sing1.51Å1.54Å
C14C15doub1.38Å1.39ÅAromatic
C14H14sing1.08Å1.10Å
C15H15sing1.08Å1.10Å
C16H161sing1.09Å1.11Å
C16H162sing1.09Å1.11Å
C16H163sing1.09Å1.11Å
O2AS1doub1.42Å1.44Å
O1AS1doub1.42Å1.42Å
N21S1sing1.66Å1.58Å
N21HNL1sing0.97Å1.02Å
N21HNL2sing0.97Å1.02Å
C4C5sing1.38Å1.38ÅAromatic
C4H4sing1.08Å1.10Å
C5C6doub1.36Å1.38ÅAromatic
C5H5sing1.08Å1.10Å
C6S2sing1.78Å1.71ÅAromatic
C6S7sing1.76Å1.73Å
S7O3Bdoub1.42Å1.43Å
S7O4Bdoub1.42Å1.43Å
S7N8sing1.66Å1.49Å
N8HN8sing0.97Å1.02Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
S1C3C4122.7°129.0°
S1C3S2122.5°129.1°
C3S1O2A103.8°105.8°
C3S1O1A108.4°105.8°
C3S1N21104.5°107.4°
C4C3S2114.7°102.0°
C3C4C5110.9°119.0°
C3C4H4124.6°120.5°
C3S2C687.6°98.1°
C10C9N8112.9°109.5°
C10C9H91111.0°109.5°
C10C9H92111.0°109.5°
C9C10C11121.7°120.0°
C9C10C15118.7°120.0°
N8C9H91110.9°109.4°
N8C9H92110.9°109.4°
C9N8S7113.8°120.1°
C9N8HN8110.6°119.9°
H91C9H9299.4°109.4°
C11C10C15119.6°120.0°
C10C11C12119.8°120.0°
C10C11H11120.5°120.0°
C10C15C14120.5°120.0°
C10C15H15119.8°120.0°
C12C11H11119.7°120.0°
C11C12C13120.1°119.9°
C11C12H12119.6°120.0°
C13C12H12120.2°120.0°
C12C13C14119.8°120.0°
C12C13C16121.4°120.0°
C14C13C16118.8°120.0°
C13C14C15120.1°120.0°
C13C14H14119.9°120.1°
C13C16H161121.4°109.5°
C13C16H162107.9°109.5°
C13C16H163107.9°109.5°
C15C14H14119.9°119.9°
C14C15H15119.7°120.0°
H161C16H162107.9°109.5°
H161C16H163108.0°109.5°
H162C16H163101.9°109.5°
O2AS1O1A110.6°125.4°
O2AS1N21114.9°105.7°
O1AS1N21113.8°105.8°
S1N21HNL1104.5°120.0°
S1N21HNL2114.1°120.0°
HNL1N21HNL2114.1°120.0°
C5C4H4124.4°120.5°
C4C5C6111.6°119.0°
C4C5H5123.9°120.5°
C6C5H5124.4°120.5°
C5C6S2115.0°102.0°
C5C6S7129.8°129.0°
S2C6S7115.1°129.0°
C6S7O3B109.2°105.8°
C6S7O4B106.0°105.8°
C6S7N8111.3°107.3°
O3BS7O4B103.5°125.4°
O3BS7N8113.9°105.8°
O4BS7N8112.5°105.8°
S7N8HN8110.6°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
S1C3C4S2177.2°179.9°
C3S1O2AO1A116.1°123.2°
C3S1O2AN21113.4°113.7°
C3S1O1AN21115.8°113.7°
C3S1N21HNL1180.0°180.0°
C3S1N21HNL254.7°0.1°
S1C3C4C5177.0°179.7°
S1C3C4H43.0°0.1°
S1C3S2C6176.8°179.9°
C4C3S1O2A167.5°157.4°
C4C3S1O1A74.9°22.5°
C4C3S1N2146.8°90.1°
C3C4C5H4180.0°179.9°
C3C4C5C60.1°0.4°
C3C4C5H5179.9°180.0°
C4C3S2C60.4°0.1°
S2C3S1O2A15.5°22.5°
S2C3S1O1A102.1°157.3°
S2C3S1N21136.2°90.0°
S2C3C4C50.2°0.2°
S2C3C4H4179.8°180.0°
C3S2C6C50.4°0.2°
C3S2C6S7177.1°179.9°
C10C9N8H91125.3°120.0°
C10C9N8H92125.3°120.1°
C10C9H91H92116.8°120.1°
C9C10C11C15180.0°180.0°
C9C10C11C12179.8°180.0°
C9C10C11H110.2°0.0°
C9C10C15C14180.0°179.8°
C9C10C15H150.0°0.0°
C10C9N8S7113.4°180.0°
C10C9N8HN8121.3°0.0°
N8C9H91H92116.8°119.9°
N8C9C10C1138.3°90.0°
N8C9C10C15141.7°90.0°
C9N8S7C666.4°60.0°
C9N8S7O3B169.7°172.6°
C9N8S7O4B52.3°52.6°
C9N8S7HN8125.3°180.0°
H91C9C10C1186.9°150.0°
H91C9C10C1593.1°30.0°
H91C9N8S7121.3°59.9°
H91C9N8HN84.0°120.0°
H92C9C10C11163.6°30.0°
H92C9C10C1516.4°150.0°
H92C9N8S711.9°59.9°
H92C9N8HN8113.4°120.1°
C10C11C12H11180.0°180.0°
C10C11C12C130.2°0.0°
C10C11C12H12179.8°180.0°
C11C10C15C140.0°0.2°
C11C10C15H15180.0°180.0°
C15C10C11C120.1°0.0°
C15C10C11H11179.8°180.0°
C10C15C14C130.1°0.5°
C10C15C14H15180.0°179.8°
C10C15C14H14179.8°180.0°
C11C12C13H12180.0°180.0°
C11C12C13C140.2°0.3°
C11C12C13C16178.9°180.0°
H11C11C12C13179.7°180.0°
H11C11C12H120.2°0.0°
C12C13C14C16179.1°179.7°
C12C13C14C150.0°0.5°
C12C13C14H14179.9°179.9°
C12C13C16H161179.9°90.0°
C12C13C16H16254.7°150.0°
C12C13C16H16354.7°30.0°
H12C12C13C14179.9°179.7°
H12C12C13C161.0°0.0°
C13C14C15H14180.0°179.6°
C13C14C15H15179.9°179.7°
C14C13C16H1610.8°90.2°
C14C13C16H162124.4°29.7°
C14C13C16H163126.2°149.7°
C16C13C14C15179.2°179.8°
C16C13C14H140.8°0.2°
C13C16H161H162125.2°120.0°
C13C16H161H163125.3°120.0°
C13C16H162H163113.5°120.0°
H14C14C15H150.1°0.2°
H161C16H162H163113.6°120.0°
O2AS1O1AN21131.0°123.1°
O2AS1N21HNL167.0°67.4°
O2AS1N21HNL2167.8°112.6°
O1AS1N21HNL161.9°67.3°
O1AS1N21HNL263.3°112.6°
S1N21HNL1HNL2125.2°179.9°
C4C5C6H5180.0°179.6°
C4C5C6S20.4°0.4°
C4C5C6S7176.7°179.8°
H4C4C5C6179.9°179.7°
H4C4C5H50.1°0.2°
C5C6S2S7177.5°179.8°
C5C6S7O3B133.2°22.8°
C5C6S7O4B115.9°157.6°
C5C6S7N86.6°89.8°
H5C5C6S2179.6°179.9°
H5C5C6S73.3°0.2°
S2C6S7O3B49.7°157.4°
S2C6S7O4B61.2°22.6°
S2C6S7N8176.3°90.0°
C6S7O3BO4B112.6°123.2°
C6S7O3BN8125.0°113.7°
C6S7O4BN8121.8°113.7°
C6S7N8HN858.9°120.1°
O3BS7O4BN8123.4°123.1°
O3BS7N8HN865.0°7.5°
O4BS7N8HN8177.6°127.4°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon