Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

AK8

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C1doub1.32Å1.34ÅAromatic
N1C2sing1.33Å1.34ÅAromatic
N3C8doub1.32Å1.33ÅAromatic
N3C9sing1.32Å1.34ÅAromatic
C4N2doub1.32Å1.32ÅAromatic
C4C3sing1.38Å1.39ÅAromatic
C5C6sing1.40Å1.39ÅAromatic
C5C2sing1.48Å1.40ÅAromatic
C5C9doub1.40Å1.40ÅAromatic
C6C7doub1.38Å1.39ÅAromatic
C7C8sing1.38Å1.39ÅAromatic
C10N4sing1.47Å1.48Å
C13C12doub1.38Å1.40ÅAromatic
C13C14sing1.39Å1.40ÅAromatic
C15C16sing1.38Å1.40ÅAromatic
C15C14doub1.39Å1.40ÅAromatic
C17C16sing1.51Å1.54Å
C20C21doub1.38Å1.39ÅAromatic
C20C19sing1.39Å1.40ÅAromatic
C21C22sing1.38Å1.39ÅAromatic
C22C23doub1.38Å1.40ÅAromatic
C24C19doub1.39Å1.40ÅAromatic
C24C23sing1.38Å1.40ÅAromatic
N4C1sing1.38Å1.34Å
C1N2sing1.33Å1.35ÅAromatic
C3C2doub1.40Å1.40ÅAromatic
C9O1sing1.36Å1.37Å
O1C11sing1.36Å1.37Å
C11C16doub1.39Å1.40ÅAromatic
C11C12sing1.39Å1.40ÅAromatic
C14N5sing1.40Å1.35Å
N5C18sing1.35Å1.34Å
C18O2doub1.22Å1.23Å
C18N6sing1.35Å1.35Å
N6C19sing1.40Å1.35Å
C23C25sing1.51Å1.55Å
C25F2sing1.40Å1.33Å
C25F3sing1.40Å1.34Å
C25F1sing1.40Å1.34Å
C4H4sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C7H7sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
C10H10sing1.09Å1.10Å
C10H10Asing1.09Å1.10Å
C10H10Bsing1.09Å1.10Å
C13H13sing1.08Å1.08Å
C15H15sing1.08Å1.08Å
C17H17sing1.09Å1.10Å
C17H17Asing1.09Å1.10Å
C17H17Bsing1.09Å1.10Å
C20H20sing1.08Å1.08Å
C21H21sing1.08Å1.08Å
C22H22sing1.08Å1.08Å
C24H24sing1.08Å1.08Å
N4HN4sing0.97Å1.00Å
C3H3sing1.08Å1.08Å
C12H12sing1.08Å1.08Å
N5HN5sing0.97Å1.00Å
N6HN6sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1N1C2121.1°120.6°
N1C1N4120.0°119.1°
N1C1N2120.4°121.7°
N1C2C5119.1°120.5°
N1C2C3118.6°119.0°
C8N3C9121.8°121.8°
N3C8C7121.0°121.1°
N3C8H8119.5°119.5°
N3C9C5120.0°120.5°
N3C9O1120.4°119.8°
N2C4C3119.1°119.3°
C4N2C1121.7°121.0°
N2C4H4120.5°120.4°
C4C3C2119.2°118.4°
C3C4H4120.5°120.3°
C4C3H3120.4°120.8°
C6C5C2118.3°120.5°
C6C5C9119.1°118.9°
C5C6C7119.2°118.3°
C5C6H6120.4°120.8°
C2C5C9122.6°120.6°
C5C2C3122.3°120.5°
C5C9O1119.7°119.8°
C6C7C8118.9°119.4°
C7C6H6120.4°120.8°
C6C7H7120.5°120.3°
C8C7H7120.6°120.3°
C7C8H8119.5°119.4°
C10N4C1121.5°120.0°
N4C10H10109.5°109.5°
N4C10H10A109.4°109.4°
N4C10H10B109.5°109.5°
C10N4HN4105.6°120.0°
C12C13C14120.2°120.0°
C13C12C11120.7°120.0°
C12C13H13119.9°120.0°
C13C12H12119.6°120.0°
C13C14C15119.0°120.0°
C13C14N5121.9°120.0°
C14C13H13119.9°120.0°
C16C15C14121.2°120.0°
C15C16C17118.9°120.0°
C15C16C11119.5°120.0°
C16C15H15119.4°120.1°
C15C14N5119.1°120.0°
C14C15H15119.4°120.0°
C17C16C11121.5°120.0°
C16C17H17109.5°109.4°
C16C17H17A109.5°109.5°
C16C17H17B109.4°109.5°
C21C20C19120.4°119.9°
C20C21C22120.5°120.1°
C21C20H20119.8°120.0°
C20C21H21119.8°120.0°
C20C19C24118.6°119.9°
C20C19N6122.7°120.1°
C19C20H20119.8°120.0°
C21C22C23120.2°120.1°
C22C21H21119.7°119.9°
C21C22H22119.9°119.9°
C22C23C24118.8°120.1°
C22C23C25119.4°119.9°
C23C22H22119.9°120.0°
C19C24C23121.4°119.9°
C24C19N6118.7°120.1°
C19C24H24119.3°120.1°
C24C23C25121.8°120.0°
C23C24H24119.3°120.0°
N4C1N2119.6°119.2°
C1N4HN4105.6°120.0°
C2C3H3120.4°120.8°
C9O1C11118.5°117.9°
O1C11C16121.9°120.0°
O1C11C12118.7°120.0°
C16C11C12119.4°120.0°
C11C12H12119.7°120.0°
C14N5C18123.4°120.0°
C14N5HN5118.3°120.0°
N5C18O2121.4°120.0°
N5C18N6115.5°120.0°
C18N5HN5118.3°120.1°
O2C18N6123.1°120.0°
C18N6C19128.2°120.1°
C18N6HN6115.9°119.9°
C19N6HN6115.9°120.0°
C23C25F2111.8°109.5°
C23C25F3110.1°109.5°
C23C25F1109.0°109.5°
F2C25F3107.5°109.5°
F2C25F1108.8°109.5°
F3C25F1109.6°109.5°
H10C10H10A109.5°109.4°
H10C10H10B109.4°109.5°
H10AC10H10B109.5°109.5°
H17C17H17A109.5°109.5°
H17C17H17B109.5°109.5°
H17AC17H17B109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1C1N2C40.0°0.1°
C1N1C2C5179.7°180.0°
N1C1N4C1010.4°180.0°
N1C1N4N2179.8°180.0°
C1N1C2C31.0°0.0°
N1C1N4HN4109.6°0.0°
N1C2C3C40.7°0.1°
N1C2C5C636.3°180.0°
N1C2C5C3178.7°179.9°
N1C2C5C9143.9°0.0°
C2N1C1N4179.6°180.0°
C2N1C1N20.6°0.0°
N1C2C3H3179.3°180.0°
C8N3C9C50.3°0.0°
N3C8C7C60.2°0.0°
N3C8C7H8180.0°180.0°
C8N3C9O1179.6°180.0°
N3C8C7H7179.8°180.0°
N3C9C5C60.4°0.0°
N3C9C5C2179.9°179.9°
N3C9C5O1179.3°180.0°
C9N3C8C70.2°0.0°
N3C9O1C117.9°5.0°
C9N3C8H8179.8°180.0°
N2C4C3H4180.0°179.9°
C4N2C1N4179.7°180.0°
N2C4C3C20.1°0.1°
N2C4C3H3179.9°180.0°
C4C3C2C5179.4°180.0°
C3C4N2C10.3°0.1°
C4C3C2H3180.0°179.9°
C6C5C2C9179.7°180.0°
C5C6C7H6180.0°180.0°
C5C6C7C80.3°0.0°
C6C5C2C3142.4°0.0°
C6C5C9O1179.7°180.0°
C5C6C7H7179.7°180.0°
C2C5C6C7179.9°180.0°
C2C5C9O10.6°0.0°
C2C5C6H60.1°0.0°
C5C2C3H30.6°0.1°
C9C5C6C70.4°0.0°
C9C5C2C337.4°180.0°
C5C9O1C11172.8°175.0°
C9C5C6H6179.6°180.0°
C6C7C8H7180.0°180.0°
C6C7C8H8179.8°180.0°
C8C7C6H6179.7°180.0°
C10N4C1HN4120.0°180.0°
C10N4C1N2169.3°0.0°
N4C10H10H10A120.0°119.9°
N4C10H10H10B120.0°120.0°
N4C10H10AH10B120.0°120.0°
C12C13C14H13180.0°179.7°
C12C13C14C150.4°0.0°
C13C12C11O1179.3°180.0°
C13C12C11C160.7°0.0°
C13C12C11H12180.0°180.0°
C12C13C14N5179.9°180.0°
C13C14C15C160.1°0.0°
C13C14C15N5179.7°180.0°
C14C13C12C110.0°0.0°
C13C14N5C1863.9°35.1°
C13C14C15H15179.9°180.0°
C14C13C12H12180.0°180.0°
C13C14N5HN5116.1°144.8°
C16C15C14H15180.0°180.0°
C15C16C17C11179.3°180.0°
C15C16C11O1179.5°179.9°
C15C16C11C120.9°0.0°
C16C15C14N5179.8°180.0°
C15C16C17H17103.3°90.0°
C15C16C17H17A136.7°150.0°
C15C16C17H17B16.7°30.0°
C14C15C16C17179.8°180.0°
C14C15C16C110.5°0.0°
C15C14N5C18116.4°144.8°
C15C14C13H13179.6°179.7°
C15C14N5HN563.6°35.2°
C17C16C11O11.3°0.0°
C17C16C11C12179.8°180.0°
C17C16C15H150.2°0.0°
C16C17H17H17A120.0°120.0°
C16C17H17H17B120.0°120.0°
C16C17H17AH17B120.0°120.0°
C21C20C19H20180.0°179.7°
C20C21C22H21180.0°180.0°
C20C21C22C230.0°0.1°
C21C20C19C240.9°0.1°
C21C20C19N6179.2°180.0°
C20C21C22H22180.0°180.0°
C19C20C21C220.5°0.0°
C20C19C24N6178.4°179.9°
C20C19C24C230.9°0.1°
C20C19N6C180.9°34.4°
C19C20C21H21179.5°180.0°
C20C19C24H24179.1°180.0°
C20C19N6HN6179.0°145.6°
C21C22C23H22180.0°179.9°
C21C22C23C240.1°0.1°
C21C22C23C25179.8°179.9°
C22C21C20H20179.5°179.7°
C22C23C24C190.4°0.0°
C22C23C24C25179.7°180.0°
C22C23C25F2150.4°0.0°
C22C23C25F390.1°120.0°
C22C23C25F130.1°120.0°
C23C22C21H21180.0°180.0°
C22C23C24H24179.6°179.9°
C19C24C23H24180.0°179.9°
C24C19N6C18177.4°145.6°
C19C24C23C25179.3°180.0°
C24C19C20H20179.1°179.8°
C24C19N6HN62.7°34.5°
C23C24C19N6179.2°180.0°
C24C23C25F229.9°180.0°
C24C23C25F389.6°60.0°
C24C23C25F1150.2°60.0°
C24C23C22H22179.9°180.0°
C1N4C10H1026.1°180.0°
C1N4C10H10A93.9°60.0°
C1N4C10H10B146.1°60.0°
C1N2C4H4179.7°180.0°
N2C1N4HN470.7°180.0°
C2C3C4H4179.9°180.0°
C9O1C11C1683.8°87.6°
C9O1C11C1297.7°92.4°
O1C11C16C12178.5°180.0°
O1C11C12H120.7°0.0°
C11C16C15H15179.5°180.0°
C11C16C17H1776.0°90.0°
C11C16C17H17A44.0°30.0°
C11C16C17H17B164.0°150.0°
C16C11C12H12179.3°180.0°
C11C12C13H13180.0°179.7°
C14N5C18HN5180.0°179.9°
C14N5C18O20.9°4.2°
C14N5C18N6179.8°175.9°
N5C14C13H130.1°0.3°
N5C14C15H150.2°0.0°
N5C18O2N6179.2°180.0°
N5C18N6C19179.3°174.1°
N5C18N6HN60.7°5.8°
O2C18N6C191.5°5.9°
O2C18N5HN5179.1°175.8°
O2C18N6HN6178.5°174.2°
C18N6C19HN6180.0°179.9°
N6C18N5HN50.2°4.2°
N6C19C20H200.8°0.3°
N6C19C24H240.8°0.1°
C23C25F2F3121.0°120.0°
C23C25F2F1120.4°120.0°
C23C25F3F1119.9°120.0°
C25C23C22H220.2°0.0°
C25C23C24H240.7°0.1°
F2C25F3F1118.1°120.0°
H4C4C3H30.1°0.1°
H6C6C7H70.3°0.0°
H7C7C8H80.2°0.0°
H10C10H10AH10B120.0°120.0°
H10C10N4HN493.9°0.1°
H10AC10N4HN4146.1°120.0°
H10BC10N4HN426.0°120.0°
H13C13C12H120.0°0.3°
H17C17H17AH17B120.0°120.1°
H20C20C21H210.5°0.3°
H21C21C22H220.0°0.1°

247536

PDB entries from 2026-01-14

PDB statisticsPDBj update infoContact PDBjnumon