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AIS

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2'C2'sing1.43Å1.43Å
O2'H1sing0.97Å0.95Å
C2'C3'sing1.55Å1.53Å
C2'C1'sing1.55Å1.53Å
C2'H2'sing1.09Å1.11Å
C3'O3'sing1.43Å1.43Å
C3'C4'sing1.55Å1.53Å
C3'H3'sing1.09Å1.12Å
O3'H3sing0.97Å0.95Å
C4'C5'sing1.53Å1.53Å
C4'O4'sing1.44Å1.44Å
C4'H4'sing1.09Å1.11Å
C5'O5'sing1.43Å1.43Å
C5'H5'1sing1.09Å1.12Å
C5'H5'2sing1.09Å1.11Å
O5'H5'sing0.97Å0.95Å
O4'C1'sing1.44Å1.43Å
C1'N1sing1.46Å1.48Å
C1'H1'sing1.09Å1.12Å
N1C2sing1.36Å1.33ÅAromatic
N1C5sing1.37Å1.33ÅAromatic
C2N3doub1.30Å1.33ÅAromatic
C2H2sing1.08Å1.10Å
N3C4sing1.34Å1.33ÅAromatic
C4C5doub1.35Å1.33ÅAromatic
C4H4sing1.08Å1.10Å
C5N6sing1.40Å1.33Å
N6HN61sing0.97Å1.02Å
N6HN62sing0.97Å1.02Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2'O2'H1111.8°106.8°
O2'C2'C3'111.8°110.5°
O2'C2'C1'112.4°110.8°
O2'C2'H2'103.9°110.5°
C3'C2'C1'102.4°104.0°
C3'C2'H2'113.7°110.5°
C2'C3'O3'109.2°110.5°
C2'C3'C4'103.4°104.1°
C2'C3'H3'113.8°110.6°
C1'C2'H2'113.0°110.4°
C2'C1'O4'101.0°104.9°
C2'C1'N1113.6°110.4°
C2'C1'H1'114.1°110.4°
O3'C3'C4'110.2°110.5°
O3'C3'H3'107.4°110.5°
C3'O3'H3109.1°106.8°
C4'C3'H3'112.9°110.5°
C3'C4'C5'110.3°110.4°
C3'C4'O4'103.7°104.8°
C3'C4'H4'112.8°110.4°
C5'C4'O4'109.9°110.4°
C5'C4'H4'107.0°110.3°
C4'C5'O5'109.9°109.5°
C4'C5'H5'1112.1°109.5°
C4'C5'H5'2112.1°109.5°
O4'C4'H4'113.2°110.4°
C4'O4'C1'101.8°105.3°
O5'C5'H5'1112.0°109.5°
O5'C5'H5'2112.1°109.5°
C5'O5'H5'109.9°106.8°
H5'1C5'H5'298.4°109.5°
O4'C1'N1113.9°110.3°
O4'C1'H1'113.7°110.4°
N1C1'H1'101.1°110.4°
C1'N1C2126.5°126.5°
C1'N1C5127.1°126.4°
C2N1C5106.4°107.1°
N1C2N3108.6°108.7°
N1C2H2125.7°125.6°
N1C5C4110.0°106.7°
N1C5N6125.4°126.6°
N3C2H2125.7°125.7°
C2N3C4108.5°109.4°
N3C4C5106.5°108.1°
N3C4H4126.8°126.0°
C5C4H4126.7°125.9°
C4C5N6124.6°126.7°
C5N6HN61106.6°119.9°
C5N6HN62125.4°120.0°
HN61N6HN62106.6°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2'C2'C3'C1'120.6°118.9°
O2'C2'C3'H2'117.2°122.6°
O2'C2'C1'H2'117.2°122.7°
O2'C2'C3'O3'13.8°0.1°
O2'C2'C3'C4'131.0°118.8°
O2'C2'C3'H3'106.2°122.6°
O2'C2'C1'O4'158.4°142.6°
O2'C2'C1'N179.2°98.6°
O2'C2'C1'H1'36.0°23.7°
H1O2'C2'C3'180.0°61.5°
H1O2'C2'C1'65.5°176.2°
H1O2'C2'H2'57.0°61.2°
C3'C2'C1'H2'122.7°118.6°
C2'C3'O3'C4'112.8°114.6°
C2'C3'O3'H3'123.8°122.8°
C2'C3'C4'H3'123.4°118.8°
C2'C3'O3'H3180.0°176.2°
C2'C3'C4'C5'138.4°143.0°
C2'C3'C4'O4'20.8°24.1°
C2'C3'C4'H4'102.0°94.8°
C3'C2'C1'O4'38.3°23.8°
C3'C2'C1'N1160.7°142.7°
C3'C2'C1'H1'84.1°95.0°
C1'C2'C3'O3'106.7°118.8°
C1'C2'C3'C4'10.5°0.1°
C1'C2'C3'H3'133.3°118.5°
C2'C1'O4'C4'53.0°40.5°
C2'C1'O4'N1122.2°118.9°
C2'C1'O4'H1'122.6°118.9°
C2'C1'N1H1'122.6°122.3°
C2'C1'N1C284.6°93.5°
C2'C1'N1C596.8°86.1°
H2'C2'C3'O3'131.0°122.7°
H2'C2'C3'C4'111.8°118.7°
H2'C2'C3'H3'11.0°0.0°
H2'C2'C1'O4'84.4°94.7°
H2'C2'C1'N138.0°24.1°
H2'C2'C1'H1'153.2°146.4°
O3'C3'C4'H3'120.1°122.6°
O3'C3'C4'C5'105.1°98.3°
O3'C3'C4'O4'137.3°142.8°
O3'C3'C4'H4'14.5°23.9°
C4'C3'O3'H367.2°61.5°
C3'C4'C5'O4'113.7°115.4°
C3'C4'C5'H4'123.1°122.3°
C3'C4'O4'H4'122.6°118.8°
C3'C4'C5'O5'179.3°178.1°
C3'C4'C5'H5'155.4°58.1°
C3'C4'C5'H5'254.1°61.9°
C3'C4'O4'C1'46.3°40.5°
H3'C3'O3'H356.1°61.1°
H3'C3'C4'C5'15.0°24.2°
H3'C3'C4'O4'102.6°94.7°
H3'C3'C4'H4'134.6°146.5°
C5'C4'O4'H4'119.5°122.3°
C4'C5'O5'H5'1125.3°120.0°
C4'C5'O5'H5'2125.3°120.0°
C4'C5'H5'1H5'2118.0°120.0°
C4'C5'O5'H5'180.0°180.0°
C5'C4'O4'C1'164.2°159.5°
O4'C4'C5'O5'66.9°66.4°
O4'C4'C5'H5'158.3°173.5°
O4'C4'C5'H5'2167.8°53.6°
C4'O4'C1'N1175.2°159.3°
C4'O4'C1'H1'69.6°78.4°
H4'C4'C5'O5'56.3°55.9°
H4'C4'C5'H5'1178.5°64.2°
H4'C4'C5'H5'269.0°175.8°
H4'C4'O4'C1'76.3°78.3°
O5'C5'H5'1H5'2118.0°120.0°
H5'1C5'O5'H5'54.7°60.0°
H5'2C5'O5'H5'54.8°60.0°
O4'C1'N1H1'122.4°122.3°
O4'C1'N1C230.4°22.0°
O4'C1'N1C5148.3°158.4°
C1'N1C2C5178.9°179.7°
C1'N1C2N3178.8°179.9°
C1'N1C2H21.2°0.3°
C1'N1C5C4178.8°180.0°
C1'N1C5N60.9°0.3°
H1'C1'N1C2152.8°144.3°
H1'C1'N1C525.9°36.2°
N1C2N3H2180.0°179.7°
N1C2N3C40.1°0.3°
C2N1C5C40.1°0.3°
C2N1C5N6179.7°179.9°
C5N1C2N30.1°0.4°
C5N1C2H2179.9°179.9°
N1C5C4N30.0°0.2°
N1C5C4N6179.7°179.7°
N1C5C4H4179.9°179.8°
N1C5N6HN6154.8°179.7°
N1C5N6HN62180.0°0.6°
C2N3C4C50.0°0.1°
C2N3C4H4180.0°180.0°
H2C2N3C4179.9°180.0°
N3C4C5H4180.0°179.9°
N3C4C5N6179.7°179.9°
C4C5N6HN61124.8°0.0°
C4C5N6HN620.4°179.7°
H4C4C5N60.3°0.0°
C5N6HN61HN62136.0°179.7°

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PDB entries from 2024-07-17

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