AH0
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | C2 | sing | 1.54Å | 1.57Å | |
C1 | O5 | sing | 1.45Å | 1.43Å | |
C1 | O6 | sing | 1.44Å | 1.44Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C2 | N2 | sing | 1.47Å | 1.46Å | |
C2 | C3 | sing | 1.53Å | 1.57Å | |
C2 | H2 | sing | 1.09Å | 1.10Å | |
N2 | C7 | sing | 1.35Å | 1.33Å | |
N2 | HN2 | sing | 0.97Å | 1.00Å | |
C7 | O7 | doub | 1.21Å | 1.24Å | |
C7 | C8 | sing | 1.51Å | 1.54Å | |
C8 | H81 | sing | 1.09Å | 1.10Å | |
C8 | H82 | sing | 1.09Å | 1.10Å | |
C8 | H83 | sing | 1.09Å | 1.10Å | |
C3 | O3 | sing | 1.43Å | 1.42Å | |
C3 | C4 | sing | 1.53Å | 1.55Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
O3 | CA | sing | 1.43Å | 1.43Å | |
C4 | O4 | sing | 1.43Å | 1.43Å | |
C4 | C5 | sing | 1.54Å | 1.55Å | |
C4 | H4 | sing | 1.09Å | 1.10Å | |
O4 | HO4 | sing | 0.97Å | 0.95Å | |
C5 | O5 | sing | 1.45Å | 1.43Å | |
C5 | C6 | sing | 1.55Å | 1.51Å | |
C5 | H5 | sing | 1.09Å | 1.10Å | |
C6 | O6 | sing | 1.44Å | 1.44Å | |
C6 | H61 | sing | 1.09Å | 1.10Å | |
C6 | H62 | sing | 1.09Å | 1.10Å | |
CA | CB | sing | 1.53Å | 1.53Å | |
CA | C | sing | 1.51Å | 1.53Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | HB1 | sing | 1.09Å | 1.10Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
C | O | doub | 1.21Å | 1.23Å | |
C | OXT | sing | 1.34Å | 1.33Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | C1 | O5 | 111.2° | 107.5° |
C2 | C1 | O6 | 110.8° | 108.2° |
C2 | C1 | H1 | 105.9° | 111.4° |
C1 | C2 | N2 | 108.7° | 109.6° |
C1 | C2 | C3 | 110.4° | 108.9° |
C1 | C2 | H2 | 109.5° | 109.6° |
O5 | C1 | O6 | 104.2° | 105.8° |
O5 | C1 | H1 | 112.3° | 111.4° |
C1 | O5 | C5 | 100.0° | 102.7° |
O6 | C1 | H1 | 112.7° | 112.2° |
C1 | O6 | C6 | 107.7° | 107.0° |
N2 | C2 | C3 | 109.8° | 109.5° |
N2 | C2 | H2 | 110.1° | 109.6° |
C2 | N2 | C7 | 130.5° | 120.0° |
C2 | N2 | HN2 | 114.8° | 120.1° |
C3 | C2 | H2 | 108.3° | 109.7° |
C2 | C3 | O3 | 111.7° | 109.5° |
C2 | C3 | C4 | 112.3° | 109.3° |
C2 | C3 | H3 | 105.4° | 109.5° |
C7 | N2 | HN2 | 114.8° | 119.9° |
N2 | C7 | O7 | 123.3° | 120.0° |
N2 | C7 | C8 | 114.6° | 120.0° |
O7 | C7 | C8 | 122.1° | 120.0° |
C7 | C8 | H81 | 109.5° | 109.5° |
C7 | C8 | H82 | 109.5° | 109.4° |
C7 | C8 | H83 | 109.5° | 109.5° |
H81 | C8 | H82 | 109.5° | 109.5° |
H81 | C8 | H83 | 109.5° | 109.5° |
H82 | C8 | H83 | 109.5° | 109.4° |
O3 | C3 | C4 | 107.7° | 109.5° |
O3 | C3 | H3 | 110.2° | 109.5° |
C3 | O3 | CA | 114.8° | 114.0° |
C4 | C3 | H3 | 109.6° | 109.5° |
C3 | C4 | O4 | 109.0° | 109.6° |
C3 | C4 | C5 | 110.5° | 108.5° |
C3 | C4 | H4 | 108.9° | 109.7° |
O3 | CA | CB | 111.3° | 109.4° |
O3 | CA | C | 109.1° | 109.5° |
O3 | CA | HA | 109.0° | 109.5° |
O4 | C4 | C5 | 108.7° | 109.6° |
O4 | C4 | H4 | 110.7° | 109.6° |
C4 | O4 | HO4 | 109.5° | 114.0° |
C5 | C4 | H4 | 109.1° | 109.8° |
C4 | C5 | O5 | 111.0° | 107.2° |
C4 | C5 | C6 | 115.7° | 107.7° |
C4 | C5 | H5 | 102.1° | 112.6° |
O5 | C5 | C6 | 102.5° | 102.6° |
O5 | C5 | H5 | 115.4° | 112.7° |
C6 | C5 | H5 | 110.7° | 113.3° |
C5 | C6 | O6 | 101.9° | 104.9° |
C5 | C6 | H61 | 112.1° | 110.4° |
C5 | C6 | H62 | 113.7° | 110.3° |
O6 | C6 | H61 | 112.1° | 110.4° |
O6 | C6 | H62 | 113.7° | 110.3° |
H61 | C6 | H62 | 103.8° | 110.4° |
CB | CA | C | 111.0° | 109.4° |
CB | CA | HA | 107.1° | 109.5° |
CA | CB | HB1 | 109.5° | 109.5° |
CA | CB | HB2 | 109.5° | 109.5° |
CA | CB | HB3 | 109.5° | 109.5° |
C | CA | HA | 109.3° | 109.5° |
CA | C | O | 120.5° | 120.0° |
CA | C | OXT | 116.2° | 120.0° |
HB1 | CB | HB2 | 109.5° | 109.4° |
HB1 | CB | HB3 | 109.5° | 109.4° |
HB2 | CB | HB3 | 109.5° | 109.5° |
O | C | OXT | 123.3° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | C1 | O5 | O6 | 119.4° | 115.5° |
C2 | C1 | O5 | H1 | 118.4° | 122.3° |
C2 | C1 | O6 | H1 | 118.4° | 123.2° |
C1 | C2 | N2 | C3 | 120.9° | 119.3° |
C1 | C2 | N2 | H2 | 119.9° | 120.3° |
C1 | C2 | C3 | H2 | 119.9° | 119.9° |
C1 | C2 | N2 | C7 | 126.6° | 85.0° |
C1 | C2 | N2 | HN2 | 53.4° | 95.0° |
C1 | C2 | C3 | O3 | 85.3° | 68.4° |
C1 | C2 | C3 | C4 | 35.9° | 51.5° |
C1 | C2 | C3 | H3 | 155.1° | 171.5° |
C2 | C1 | O5 | C5 | 75.0° | 74.7° |
C2 | C1 | O6 | C6 | 95.8° | 89.0° |
O5 | C1 | O6 | H1 | 121.9° | 121.7° |
O5 | C1 | C2 | N2 | 63.5° | 55.9° |
O5 | C1 | C2 | C3 | 57.1° | 63.9° |
O5 | C1 | C2 | H2 | 176.2° | 176.2° |
C1 | O5 | C5 | C4 | 76.6° | 75.2° |
C1 | O5 | C5 | C6 | 47.5° | 38.2° |
C1 | O5 | C5 | H5 | 167.9° | 160.5° |
O5 | C1 | O6 | C6 | 23.9° | 26.0° |
O6 | C1 | C2 | N2 | 178.9° | 169.8° |
O6 | C1 | C2 | C3 | 58.3° | 50.0° |
O6 | C1 | C2 | H2 | 60.8° | 69.9° |
O6 | C1 | O5 | C5 | 44.4° | 40.8° |
C1 | O6 | C6 | C5 | 5.5° | 1.7° |
C1 | O6 | C6 | H61 | 114.4° | 120.6° |
C1 | O6 | C6 | H62 | 128.2° | 117.2° |
H1 | C1 | C2 | N2 | 58.7° | 66.5° |
H1 | C1 | C2 | C3 | 179.2° | 173.8° |
H1 | C1 | C2 | H2 | 61.6° | 53.8° |
H1 | C1 | O5 | C5 | 166.6° | 163.0° |
H1 | C1 | O6 | C6 | 145.8° | 147.8° |
N2 | C2 | C3 | H2 | 120.2° | 120.3° |
C2 | N2 | C7 | HN2 | 180.0° | 180.0° |
C2 | N2 | C7 | O7 | 0.4° | 0.1° |
C2 | N2 | C7 | C8 | 180.0° | 180.0° |
N2 | C2 | C3 | O3 | 154.8° | 171.8° |
N2 | C2 | C3 | C4 | 84.0° | 68.2° |
N2 | C2 | C3 | H3 | 35.2° | 51.8° |
C3 | C2 | N2 | C7 | 112.5° | 155.7° |
C3 | C2 | N2 | HN2 | 67.5° | 24.3° |
C2 | C3 | O3 | C4 | 123.8° | 119.9° |
C2 | C3 | O3 | H3 | 116.7° | 120.1° |
C2 | C3 | C4 | H3 | 116.7° | 120.0° |
C2 | C3 | O3 | CA | 69.6° | 89.5° |
C2 | C3 | C4 | O4 | 82.3° | 67.7° |
C2 | C3 | C4 | C5 | 37.1° | 52.0° |
C2 | C3 | C4 | H4 | 156.9° | 171.9° |
H2 | C2 | N2 | C7 | 6.7° | 35.3° |
H2 | C2 | N2 | HN2 | 173.3° | 144.7° |
H2 | C2 | C3 | O3 | 34.6° | 51.5° |
H2 | C2 | C3 | C4 | 155.8° | 171.4° |
H2 | C2 | C3 | H3 | 85.0° | 68.6° |
N2 | C7 | O7 | C8 | 179.5° | 179.9° |
N2 | C7 | C8 | H81 | 79.1° | 0.0° |
N2 | C7 | C8 | H82 | 40.9° | 120.1° |
N2 | C7 | C8 | H83 | 160.9° | 120.0° |
HN2 | N2 | C7 | O7 | 179.5° | 180.0° |
HN2 | N2 | C7 | C8 | 0.0° | 0.0° |
O7 | C7 | C8 | H81 | 100.4° | 180.0° |
O7 | C7 | C8 | H82 | 139.6° | 60.0° |
O7 | C7 | C8 | H83 | 19.6° | 59.9° |
C7 | C8 | H81 | H82 | 120.0° | 120.0° |
C7 | C8 | H81 | H83 | 120.0° | 120.1° |
C7 | C8 | H82 | H83 | 120.0° | 120.0° |
H81 | C8 | H82 | H83 | 120.0° | 120.0° |
O3 | C3 | C4 | H3 | 119.8° | 120.0° |
O3 | C3 | C4 | O4 | 154.3° | 172.3° |
O3 | C3 | C4 | C5 | 86.3° | 68.0° |
O3 | C3 | C4 | H4 | 33.5° | 51.9° |
C3 | O3 | CA | CB | 110.2° | 87.9° |
C3 | O3 | CA | C | 127.0° | 152.1° |
C3 | O3 | CA | HA | 7.7° | 32.1° |
C4 | C3 | O3 | CA | 166.6° | 150.6° |
C3 | C4 | O4 | C5 | 120.5° | 119.0° |
C3 | C4 | O4 | H4 | 119.7° | 120.4° |
C3 | C4 | C5 | H4 | 119.7° | 119.8° |
C3 | C4 | O4 | HO4 | 102.4° | 179.9° |
C3 | C4 | C5 | O5 | 59.8° | 64.8° |
C3 | C4 | C5 | C6 | 56.4° | 45.1° |
C3 | C4 | C5 | H5 | 176.7° | 170.8° |
H3 | C3 | O3 | CA | 47.1° | 30.6° |
H3 | C3 | C4 | O4 | 34.5° | 52.3° |
H3 | C3 | C4 | C5 | 153.8° | 172.0° |
H3 | C3 | C4 | H4 | 86.3° | 68.1° |
O3 | CA | CB | C | 121.7° | 120.0° |
O3 | CA | CB | HA | 119.0° | 120.0° |
O3 | CA | C | HA | 119.1° | 120.1° |
O3 | CA | CB | HB1 | 88.9° | 55.5° |
O3 | CA | CB | HB2 | 31.1° | 64.5° |
O3 | CA | CB | HB3 | 151.1° | 175.5° |
O3 | CA | C | O | 173.1° | 4.9° |
O3 | CA | C | OXT | 6.1° | 175.0° |
O4 | C4 | C5 | H4 | 120.8° | 120.5° |
O4 | C4 | C5 | O5 | 59.7° | 54.9° |
O4 | C4 | C5 | C6 | 176.0° | 164.8° |
O4 | C4 | C5 | H5 | 63.8° | 69.5° |
C5 | C4 | O4 | HO4 | 137.1° | 60.9° |
C4 | C5 | O5 | C6 | 124.1° | 113.3° |
C4 | C5 | O5 | H5 | 115.5° | 124.4° |
C4 | C5 | C6 | H5 | 115.5° | 125.2° |
C4 | C5 | C6 | O6 | 88.0° | 90.1° |
C4 | C5 | C6 | H61 | 152.0° | 151.0° |
C4 | C5 | C6 | H62 | 34.7° | 28.8° |
H4 | C4 | O4 | HO4 | 17.3° | 59.6° |
H4 | C4 | C5 | O5 | 179.5° | 175.4° |
H4 | C4 | C5 | C6 | 63.3° | 74.7° |
H4 | C4 | C5 | H5 | 57.0° | 50.9° |
O5 | C5 | C6 | H5 | 123.6° | 121.9° |
O5 | C5 | C6 | O6 | 32.9° | 22.8° |
O5 | C5 | C6 | H61 | 87.0° | 96.1° |
O5 | C5 | C6 | H62 | 155.6° | 141.7° |
C5 | C6 | O6 | H61 | 120.0° | 118.9° |
C5 | C6 | O6 | H62 | 122.7° | 118.8° |
C5 | C6 | H61 | H62 | 123.1° | 122.2° |
H5 | C5 | C6 | O6 | 156.5° | 144.7° |
H5 | C5 | C6 | H61 | 36.5° | 25.8° |
H5 | C5 | C6 | H62 | 80.8° | 96.5° |
O6 | C6 | H61 | H62 | 123.1° | 122.2° |
CB | CA | C | HA | 117.9° | 120.0° |
CA | CB | HB1 | HB2 | 120.0° | 120.0° |
CA | CB | HB1 | HB3 | 120.0° | 120.1° |
CA | CB | HB2 | HB3 | 120.0° | 120.0° |
CB | CA | C | O | 50.2° | 115.0° |
CB | CA | C | OXT | 129.0° | 65.1° |
C | CA | CB | HB1 | 32.8° | 64.5° |
C | CA | CB | HB2 | 152.8° | 175.6° |
C | CA | CB | HB3 | 87.2° | 55.6° |
CA | C | O | OXT | 179.2° | 179.9° |
CA | C | OXT | HXT | 179.2° | 180.0° |
HA | CA | CB | HB1 | 152.0° | 175.5° |
HA | CA | CB | HB2 | 87.9° | 55.6° |
HA | CA | CB | HB3 | 32.0° | 64.4° |
HA | CA | C | O | 67.7° | 125.0° |
HA | CA | C | OXT | 113.1° | 54.9° |
HB1 | CB | HB2 | HB3 | 120.0° | 119.9° |
O | C | OXT | HXT | 0.0° | 0.1° |