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SummaryGeometryRelated PDB entries

AG1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O41C31doub1.22Å1.21Å
C31C30sing1.49Å1.41Å
C31N20sing1.38Å1.37Å
C30C29sing1.40Å1.39ÅAromatic
C30C33doub1.41Å1.41ÅAromatic
C29C28sing1.45Å1.44ÅAromatic
C29C22doub1.38Å1.37ÅAromatic
C28C23sing1.42Å1.41ÅAromatic
C28C27doub1.39Å1.40ÅAromatic
C23C24doub1.39Å1.40ÅAromatic
C23N19sing1.40Å1.29ÅAromatic
C27C26sing1.38Å1.40ÅAromatic
C26C25doub1.40Å1.43ÅAromatic
C26O2sing1.37Å1.37Å
C25C24sing1.37Å1.43ÅAromatic
C33C32sing1.49Å1.41Å
C33C34sing1.43Å1.42ÅAromatic
C32N20sing1.39Å1.38Å
C32O1doub1.22Å1.21Å
C34C40doub1.40Å1.41ÅAromatic
C34C36sing1.41Å1.40ÅAromatic
C40C22sing1.42Å1.36ÅAromatic
C40N21sing1.36Å1.37ÅAromatic
C22N19sing1.37Å1.27ÅAromatic
N19RUsing2.22Å2.06Å
N21C38doub1.32Å1.35ÅAromatic
N21RUsing2.28Å2.05Å
C38C37sing1.40Å1.42ÅAromatic
C37C36doub1.36Å1.39ÅAromatic
C37F5sing1.35Å1.36Å
RUC12sing1.85Å1.99Å
RUC14sing2.19Å2.16Å
C15C16doub1.38Å1.39Å
C15C14sing1.37Å1.40Å
C16C17sing1.43Å1.40Å
C17C18doub1.37Å1.39Å
C18C14sing1.37Å1.40Å
C12O13trip1.22Å1.09Å
C14C3sing1.42Å1.48Å
C3O9doub1.24Å1.23Å
C3N4sing1.34Å1.40Å
N4C6sing1.46Å1.49Å
C6C10sing1.53Å1.54Å
C6C7sing1.54Å1.54Å
C7O8sing1.25Å1.36Å
C7O11doub1.25Å1.22Å
N20H20sing0.88Å1.00Å
C27H27sing0.94Å1.08Å
C24H24sing0.94Å1.08Å
C25H25sing0.95Å1.08Å
O2H2sing0.86Å0.95Å
C36H36sing0.93Å1.08Å
C38H38sing0.94Å1.08Å
C15H151sing0.94Å1.10Å
C16RUsing2.18Å2.25Å
C17H171sing0.95Å1.10Å
C18H18sing0.94Å1.10Å
N4H4sing0.87Å1.00Å
C6H6sing1.01Å1.10Å
C10H101sing0.97Å1.10Å
C10H102sing0.97Å1.10Å
C10H103sing0.97Å1.10Å
O8H8sing10.53Å0.95Å
RUC15sing2.18Å2.20Å
RUC17sing2.18Å2.23Å
RUC18sing2.17Å2.19Å
H1C16sing0.95Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O41C31C30129.2°129.0°
O41C31N20121.5°124.0°
C30C31N20109.2°107.0°
C31C30C29133.5°132.2°
C31C30C33107.9°107.0°
C31N20C32107.1°111.8°
C31N20H20126.4°124.5°
C29C30C33118.5°120.7°
C30C29C28139.4°136.7°
C30C29C22119.1°117.8°
C30C33C32105.3°107.4°
C30C33C34121.5°120.9°
C28C29C22101.5°105.5°
C29C28C23105.4°106.4°
C29C28C27131.0°134.1°
C29C22C40123.8°123.2°
C29C22N19114.6°112.9°
C23C28C27123.6°119.5°
C28C23C24117.8°121.1°
C28C23N19109.6°109.1°
C28C27C26119.2°119.0°
C28C27H27120.4°120.4°
C24C23N19132.5°129.8°
C23C24C25119.6°118.4°
C23C24H24120.2°120.8°
C23N19C22108.9°106.2°
C23N19RU138.1°142.0°
C27C26C25118.5°120.9°
C27C26O2119.7°116.6°
C26C27H27120.4°120.6°
C25C26O2121.8°122.4°
C26C25C24121.2°121.1°
C26C25H25119.4°119.5°
C26O2H2109.5°110.5°
C25C24H24120.2°120.8°
C24C25H25119.4°119.4°
C32C33C34133.1°131.7°
C33C32N20110.4°106.8°
C33C32O1128.1°129.0°
C33C34C40117.6°117.6°
C33C34C36125.9°125.0°
N20C32O1121.5°124.2°
C32N20H20126.5°123.7°
C40C34C36116.5°117.4°
C34C40C22119.4°119.7°
C34C40N21126.5°122.5°
C34C36C37117.3°119.6°
C34C36H36121.4°119.9°
C22C40N21114.1°117.8°
C40C22N19121.6°123.9°
C40N21C38116.8°118.5°
C40N21RU113.4°106.4°
C22N19RU112.9°105.0°
N19RUN2177.9°77.3°
N19RUC1296.4°88.0°
N19RUC14118.7°104.7°
N19RUC16153.9°159.9°
N19RUC15155.7°136.7°
N19RUC17118.5°124.1°
N19RUC18102.0°96.9°
C38N21RU129.6°130.4°
N21C38C37119.6°122.5°
N21C38H38120.2°118.5°
N21RUC1295.9°100.6°
N21RUC14153.2°138.0°
N21RUC1694.0°104.6°
N21RUC15125.8°141.4°
N21RUC1792.5°83.6°
N21RUC18122.8°101.3°
C38C37C36123.2°119.6°
C38C37F5119.5°119.2°
C37C38H38120.2°119.0°
C36C37F5117.3°121.3°
C37C36H36121.4°120.6°
C12RUC14102.4°121.4°
RUC12O13178.0°180.0°
C12RUC16109.1°110.9°
C12RUC1587.3°98.6°
C12RUC17145.0°147.5°
C12RUC18139.7°158.1°
RUC14C1572.7°71.4°
RUC14C1872.5°70.8°
RUC14C3121.6°115.9°
C14RUC1661.6°60.2°
C14RUC1537.6°36.7°
C14RUC1761.4°60.1°
C14RUC1837.4°36.8°
C16C15C14108.4°105.3°
C15C16C17107.3°108.2°
C16C15H151125.4°126.3°
C15C16RU69.8°71.6°
C16C15RU74.0°71.5°
C15C16H1125.4°125.6°
C15C14C18108.0°112.6°
C15C14C3124.8°124.5°
C14C15H151124.8°128.4°
C14C15RU69.7°71.9°
C16C17C18109.2°108.2°
C17C16RU71.1°70.9°
C16C17H171124.3°126.4°
C16C17RU72.6°70.9°
C17C16H1125.0°126.3°
C17C18C14107.1°105.5°
C18C17H171124.4°125.4°
C17C18H18125.9°126.2°
C18C17RU70.0°71.1°
C17C18RU73.3°72.1°
C18C14C3127.2°121.8°
C14C18H18125.8°128.3°
C14C18RU70.1°72.4°
C14C3O9116.8°117.3°
C14C3N4114.8°120.5°
O9C3N4128.2°122.3°
C3N4C6132.2°125.5°
C3N4H4113.9°119.0°
N4C6C10123.3°112.3°
N4C6C7106.3°111.6°
C6N4H4113.9°115.4°
N4C6H6104.1°108.5°
C10C6C7113.8°108.8°
C10C6H6103.6°108.1°
C6C10H101109.5°109.6°
C6C10H102109.5°109.6°
C6C10H103109.5°109.6°
C6C7O8115.5°118.5°
C6C7O11121.3°116.6°
C7C6H6103.6°107.5°
O8C7O11123.1°125.0°
C7O8H8109.5°73.6°
H151C15RU111.4°121.2°
C16RUC1536.2°36.9°
C16RUC1736.3°38.3°
C16RUC1861.5°63.0°
RUC16H1110.8°123.2°
H171C17RU110.6°124.4°
H18C18RU111.9°120.2°
H101C10H102109.5°109.4°
H101C10H103109.4°109.3°
H102C10H103109.5°109.3°
C15RUC1760.7°62.9°
C15RUC1862.2°63.5°
C17RUC1836.7°36.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O41C31C30N20178.0°179.7°
O41C31C30C294.7°0.2°
O41C31C30C33176.9°180.0°
O41C31N20C32177.4°179.7°
O41C31N20H202.6°0.3°
C31C30C29C33178.3°179.8°
C31C30C29C281.0°0.4°
C31C30C29C22178.1°179.8°
C31C30C33C321.0°0.0°
C31C30C33C34177.7°179.9°
C30C31N20C320.7°0.6°
C30C31N20H20179.3°179.4°
N20C31C30C29177.3°179.5°
N20C31C30C331.1°0.4°
C31N20C32C330.1°0.6°
C31N20C32H20180.0°180.0°
C31N20C32O1179.7°179.7°
C30C29C28C22179.2°179.5°
C30C29C28C23179.3°179.6°
C30C29C28C270.1°0.0°
C29C30C33C32177.6°179.9°
C29C30C33C341.0°0.1°
C30C29C22C400.0°0.4°
C30C29C22N19178.3°179.5°
C33C30C29C28179.3°179.7°
C33C30C29C220.2°0.3°
C30C33C32C34176.1°179.9°
C30C33C32N200.6°0.4°
C30C33C32O1179.0°180.0°
C30C33C34C401.6°0.1°
C30C33C34C36179.6°180.0°
C29C28C23C27179.5°179.7°
C29C28C23C24179.1°179.9°
C29C28C23N191.9°0.6°
C29C28C27C26179.9°179.6°
C28C29C22C40179.4°180.0°
C28C29C22N192.3°0.9°
C29C28C27H270.1°0.1°
C22C29C28C230.2°0.2°
C22C29C28C27179.3°179.4°
C29C22N19C233.7°1.3°
C29C22C40C340.6°0.2°
C29C22C40N19178.1°179.0°
C29C22C40N21178.4°179.5°
C29C22N19RU179.8°156.7°
C28C23C24N19176.4°179.4°
C23C28C27C260.7°0.0°
C28C23C24C250.5°0.3°
C28C23N19C223.4°1.1°
C28C23N19RU178.6°142.8°
C23C28C27H27179.3°179.7°
C28C23C24H24179.5°179.9°
C27C28C23C241.3°0.2°
C27C28C23N19178.5°179.8°
C28C27C26H27180.0°179.7°
C28C27C26C250.7°0.1°
C28C27C26O2179.8°180.0°
C23C24C25C260.9°0.2°
C23C24C25H24180.0°179.6°
C24C23N19C22179.9°179.4°
C24C23N19RU4.8°36.6°
C23C24C25H25179.1°179.9°
N19C23C24C25176.9°179.7°
C23N19C22C40178.0°179.6°
C23N19C22RU176.5°157.9°
C23N19RUN21176.6°168.4°
C23N19RUC1288.8°90.3°
C23N19RUC1419.2°31.7°
N19C23C24H243.1°0.7°
C23N19RUC16102.6°70.5°
C23N19RUC158.9°10.2°
C23N19RUC1790.3°95.3°
C23N19RUC1855.2°68.3°
C27C26C25O2179.4°180.0°
C27C26C25C241.5°0.0°
C27C26C25H25178.5°179.9°
C27C26O2H2180.0°180.0°
C26C25C24H25180.0°179.8°
C25C26C27H27179.3°179.8°
C26C25C24H24179.0°179.8°
C25C26O2H20.5°0.1°
O2C26C25C24179.0°179.9°
O2C26C27H270.2°0.2°
O2C26C25H251.0°0.1°
C33C32N20O1179.6°179.7°
C32C33C34C40177.1°179.9°
C32C33C34C364.0°0.1°
C33C32N20H20179.9°179.4°
C34C33C32N20176.7°179.6°
C34C33C32O12.9°0.1°
C33C34C40C36179.0°179.9°
C33C34C40C221.4°0.1°
C33C34C40N21177.5°179.7°
C33C34C36C37179.0°179.8°
C33C34C36H361.0°0.0°
O1C32N20H200.3°0.3°
C34C40C22N21179.0°179.7°
C34C40C22N19178.8°179.2°
C34C40N21C383.1°1.1°
C34C40N21RU179.9°157.0°
C40C34C36C370.1°0.0°
C40C34C36H36179.9°179.9°
C36C34C40C22179.7°179.9°
C36C34C40N211.4°0.4°
C34C36C37C380.1°0.2°
C34C36C37H36180.0°179.9°
C34C36C37F5179.2°180.0°
C40C22N19RU1.5°22.4°
C22C40N21C38177.9°179.3°
C22C40N21RU1.1°22.6°
N21C40C22N190.3°0.5°
C40N21RUN191.4°25.6°
C40N21C38RU176.2°152.0°
C40N21C38C373.1°1.3°
C40N21RUC1296.7°111.1°
C40N21RUC14130.2°72.4°
C40N21C38H38176.9°180.0°
C40N21RUC16153.5°133.8°
C40N21RUC15172.4°130.4°
C40N21RUC17117.2°101.5°
C40N21RUC1895.1°69.0°
C22N19RUN211.5°24.3°
C22N19RUC1296.2°125.5°
C22N19RUC14155.8°112.5°
C22N19RUC1672.4°73.6°
C22N19RUC15166.2°134.0°
C22N19RUC1784.8°48.9°
C22N19RUC18119.9°75.8°
N19RUN21C38177.7°179.9°
N19RUN21C1295.3°85.6°
N19RUN21C14131.6°97.9°
N19RUN21C16154.9°159.4°
N19RUN21C15173.8°156.0°
N19RUN21C17118.6°127.1°
N19RUN21C1896.5°94.6°
N19RUC12C14121.3°106.0°
N19RUC12C16174.7°173.0°
N19RUC12C15155.9°137.0°
N19RUC12C17178.5°171.4°
N19RUC12C18117.1°103.7°
N19RUC14C16150.2°165.6°
N19RUC14C15173.0°155.1°
N19RUC14C17108.8°121.2°
N19RUC14C1871.0°81.7°
N19RUC16C15136.0°83.5°
N19RUC17C16170.9°166.5°
N19RUC18C17122.2°141.2°
N19RUC12O1334.3°158.5°
N19RUC14C352.4°35.1°
N19RUC15H151105.6°88.1°
N19RUC16C1855.1°2.4°
N19RUC17H17150.0°71.9°
N19RUC18H180.4°19.2°
N19RUC15C1795.1°112.0°
N19RUC15C1853.1°70.5°
N19RUC16H1102.7°155.5°
N21C38C37H38180.0°178.7°
N21C38C37C361.8°0.9°
N21C38C37F5177.5°179.3°
C38N21RUC1287.0°94.3°
C38N21RUC1446.1°82.1°
C38N21RUC1622.8°20.7°
C38N21RUC153.9°24.1°
C38N21RUC1759.1°53.0°
C38N21RUC1881.2°85.5°
RUN21C38C37179.3°150.7°
N21RUC12C14160.3°177.3°
N21RUC12C1696.3°110.3°
N21RUC12C15125.7°146.3°
N21RUC12C17103.0°94.7°
N21RUC12C18164.5°179.6°
N21RUC14C1626.7°78.4°
N21RUC14C1563.4°117.6°
N21RUC14C1714.8°33.9°
N21RUC14C1852.6°5.5°
N21RUC16C15153.7°176.5°
N21RUC17C1693.3°123.5°
N21RUC18C1739.0°62.9°
N21RUC12O1344.1°124.8°
N21RUC14C3175.9°122.3°
RUN21C38H380.7°28.0°
N21RUC15H15189.2°127.3°
N21RUC16C18125.5°95.4°
N21RUC17H17127.6°2.0°
N21RUC18H1883.6°59.2°
N21RUC15C1770.1°32.6°
N21RUC15C18112.0°74.1°
N21RUC16H132.3°62.5°
C38C37C36F5179.3°179.7°
C38C37C36H36179.9°179.6°
C36C37C38H38178.2°179.6°
F5C37C36H360.8°0.1°
F5C37C38H382.5°0.7°
C12RUC14C16105.2°97.6°
C12RUC14C1568.5°58.3°
C12RUC14C17146.7°142.0°
C12RUC14C18175.5°178.5°
C12RUC15C16128.3°113.6°
C12RUC16C17173.5°166.5°
C12RUC17C18107.9°141.8°
C12RUC14C352.2°61.7°
C12RUC15H1516.1°8.2°
C12RUC16C18136.9°157.0°
C12RUC17H171131.7°97.6°
C12RUC18H18114.8°121.3°
C12RUC15C17165.3°151.7°
C12RUC15C18152.7°166.8°
C12RUC16H165.3°45.1°
C14RUC15C16117.1°113.7°
RUC14C15C1864.3°59.0°
RUC14C15C3116.9°109.1°
C14RUC16C1779.4°78.5°
C14RUC17C1838.6°39.4°
RUC14C18C3116.8°109.1°
C14RUC12O13155.6°52.5°
RUC14C3O990.0°55.4°
RUC14C3N486.2°122.8°
C14RUC15H151120.6°124.4°
C14RUC16C1842.8°42.0°
C14RUC17H171159.0°159.9°
C14RUC18H18121.6°124.6°
C14RUC15C1780.1°75.6°
C14RUC16H1159.4°160.1°
C16C15C14H151166.9°180.0°
C15C16C17RU60.7°62.3°
C15C16C17H1163.4°179.9°
C15C16C17C180.0°0.7°
C16C15C14C180.0°5.2°
C16C15C14C3178.7°173.3°
C16C15H151RU85.1°89.1°
C15C16RUH1121.3°121.0°
C15C16C17H171164.2°178.5°
C16C15RUC1879.0°79.6°
C14C15C16C170.0°2.6°
C15C14C18C170.0°5.7°
C15C14C18C3178.7°168.4°
C15C14C3O9179.9°29.1°
C15C14C3N43.9°152.8°
C15C14C18H18167.6°174.3°
C14C15C16H1163.4°177.5°
C16C17C18H171164.2°179.3°
C16C17C18RU62.4°61.5°
C16C17C18C140.0°3.7°
C17C16C15H151166.7°177.4°
C17C16RUH1121.2°121.4°
C16C17H171RU82.5°90.6°
C16C17C18H18167.6°176.2°
C17C18C14H18167.6°179.9°
C17C18C14C3178.7°174.1°
C18C17H171RU79.3°90.3°
C17C18H18RU84.8°89.1°
C18C17RUC1581.7°81.2°
C18C17C16H1163.4°179.2°
C18C14C3O91.4°138.0°
C18C14C3N4177.6°40.2°
C18C14C15H151166.8°174.8°
C14C18C17H171164.2°175.5°
O13C12RUC16140.4°14.5°
O13C12RUC15169.8°21.5°
O13C12RUC17147.1°30.1°
O13C12RUC18151.4°54.8°
C14C3O9N4175.6°178.1°
C14C3N4C6175.4°167.3°
C3C14C15H15114.4°6.7°
C3C14RUC16157.4°159.3°
C3C14C18H1813.6°5.8°
C14C3N4H44.6°16.2°
C3C14RUC17161.1°156.2°
O9C3N4C68.9°10.8°
O9C3N4H4171.1°165.7°
C3N4C6H4180.0°176.6°
C3N4C6C10134.1°150.0°
C3N4C6C70.1°87.5°
C3N4C6H6108.9°30.6°
N4C6C10C7131.0°124.0°
N4C6C10H6117.3°119.6°
N4C6C7H6109.3°118.8°
N4C6C7O877.5°40.1°
N4C6C7O11100.1°140.0°
N4C6C10H101180.0°179.7°
N4C6C10H10260.0°60.2°
N4C6C10H10360.0°59.8°
C10C6C7H6111.7°116.8°
C10C6C7O861.4°84.3°
C10C6C7O11120.9°95.6°
C10C6N4H445.9°33.4°
C6C10H101H102120.0°120.2°
C6C10H101H103120.0°120.1°
C6C10H102H103120.0°120.1°
C6C7O8O11177.6°179.9°
C7C6N4H4179.9°89.0°
C7C6C10H10149.0°56.3°
C7C6C10H102169.0°63.8°
C7C6C10H10371.0°176.2°
C6C7O8H8177.6°3.4°
O8C7C6H6173.1°158.9°
O11C7C6H69.2°21.2°
O11C7O8H80.0°176.5°
H24C24C25H251.0°0.3°
H151C15RUC17159.3°160.0°
H151C15RUC18158.8°158.5°
H151C15C16H13.4°2.6°
C16RUC18H18158.8°159.9°
H171C17C18H183.4°4.5°
H171C17RUC15157.9°158.2°
H171C17C16H10.8°1.5°
H18C18RUC15159.9°158.6°
H4N4C6H671.1°152.8°
H6C6C10H10162.8°60.1°
H6C6C10H10257.3°179.8°
H6C6C10H103177.3°59.8°
H101C10H102H103120.0°119.7°
C18RUC16H1157.8°157.9°

258222

PDB entries from 2026-08-19

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