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AFG

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OP3Psing1.61Å0.00Å
OP3HOP3sing0.97Å0.00Å
POP1doub1.48Å0.00Å
POP2sing1.61Å0.00Å
PO5'sing1.61Å0.00Å
OP2HOP2sing0.97Å0.00Å
O5'C5'sing1.43Å0.00Å
N9C4sing1.37Å0.00ÅAromatic
N9C8sing1.37Å0.00ÅAromatic
N9C1'sing1.46Å0.00Å
C4N3sing1.34Å0.00ÅAromatic
C4C5doub1.40Å0.00ÅAromatic
N3C2doub1.31Å0.00ÅAromatic
C2N2sing1.37Å0.00Å
C2N1sing1.36Å0.00ÅAromatic
N2HN21sing0.97Å0.00Å
N2HN22sing0.97Å0.00Å
N1C6sing1.35Å0.00ÅAromatic
N1HN1sing0.97Å0.00Å
C6O6doub1.22Å0.00Å
C6C5sing1.41Å0.00ÅAromatic
C5N7sing1.36Å0.00ÅAromatic
N7C8doub1.31Å0.00ÅAromatic
C8N29sing1.38Å0.00Å
C31C32doub1.39Å0.00ÅAromatic
C31C36sing1.38Å0.00ÅAromatic
C31H31sing1.08Å0.00Å
C32C33sing1.39Å0.00ÅAromatic
C32N29sing1.40Å0.00Å
C33C34doub1.38Å0.00ÅAromatic
C33H33sing1.08Å0.00Å
C34C35sing1.39Å0.00ÅAromatic
C34C37sing1.51Å0.00Å
C35C36doub1.40Å0.00ÅAromatic
C35C39sing1.48Å0.00ÅAromatic
C36H36sing1.08Å0.00Å
C37C38sing1.51Å0.00Å
C37H371sing1.09Å0.00Å
C37H372sing1.09Å0.00Å
C38C39doub1.39Å0.00ÅAromatic
C38C40sing1.38Å0.00ÅAromatic
C39C43sing1.40Å0.00ÅAromatic
C40C41doub1.38Å0.00ÅAromatic
C40H40sing1.08Å0.00Å
C41C42sing1.38Å0.00ÅAromatic
C41H41sing1.08Å0.00Å
C42C43doub1.38Å0.00ÅAromatic
C42H42sing1.08Å0.00Å
C43H43sing1.08Å0.00Å
N29H29sing0.97Å0.00Å
C2'C1'sing1.55Å0.00Å
C2'C3'sing1.54Å0.00Å
C2'H2'sing1.09Å0.00Å
C2'H2''sing1.09Å0.00Å
C5'C4'sing1.53Å0.00Å
C5'H5'sing1.09Å0.00Å
C5'H5''sing1.09Å0.00Å
C4'O4'sing1.44Å0.00Å
C4'C3'sing1.54Å0.00Å
C4'H4'sing1.09Å0.00Å
O4'C1'sing1.44Å0.00Å
C1'H1'sing1.09Å0.00Å
C3'O3'sing1.43Å0.00Å
C3'H3'sing1.09Å0.00Å
O3'HO3'sing0.97Å0.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
POP3HOP390.0°114.0°
OP3POP190.0°109.5°
OP3POP290.0°109.5°
OP3PO5'90.0°109.5°
OP1POP290.0°109.5°
OP1PO5'90.0°109.5°
OP2PO5'90.0°109.5°
POP2HOP290.0°114.0°
PO5'C5'90.0°123.0°
O5'C5'C4'90.0°109.4°
O5'C5'H5'90.0°109.5°
O5'C5'H5''90.0°109.5°
C4N9C890.0°107.5°
C4N9C1'90.0°126.2°
N9C4N390.0°134.1°
N9C4C590.0°106.2°
C8N9C1'90.0°126.3°
N9C8N790.0°109.6°
N9C8N2990.0°125.2°
N9C1'C2'90.0°110.4°
N9C1'O4'90.0°110.4°
N9C1'H1'90.0°110.4°
N3C4C590.0°119.7°
C4N3C290.0°121.1°
C4C5C690.0°118.7°
C4C5N790.0°107.4°
N3C2N290.0°119.1°
N3C2N190.0°121.8°
N2C2N190.0°119.1°
C2N2HN2190.0°120.0°
C2N2HN2290.0°120.0°
C2N1C690.0°120.4°
C2N1HN190.0°119.8°
HN21N2HN2290.0°120.0°
C6N1HN190.0°119.8°
N1C6O690.0°120.8°
N1C6C590.0°118.3°
O6C6C590.0°120.9°
C6C5N790.0°133.9°
C5N7C890.0°109.2°
N7C8N2990.0°125.2°
C8N29C3290.0°120.0°
C8N29H2990.0°120.0°
C32C31C3690.0°120.2°
C32C31H3190.0°119.9°
C31C32C3390.0°119.9°
C31C32N2990.0°120.0°
C36C31H3190.0°119.9°
C31C36C3590.0°120.1°
C31C36H3690.0°120.0°
C33C32N2990.0°120.1°
C32C33C3490.0°120.0°
C32C33H3390.0°120.0°
C32N29H2990.0°120.0°
C34C33H3390.0°120.0°
C33C34C3590.0°120.4°
C33C34C3790.0°132.1°
C35C34C3790.0°107.5°
C34C35C3690.0°119.5°
C34C35C3990.0°109.4°
C34C37C3890.0°106.0°
C34C37H37190.0°110.1°
C34C37H37290.0°110.1°
C36C35C3990.0°131.1°
C35C36H3690.0°119.9°
C35C39C3890.0°109.5°
C35C39C4390.0°131.1°
C38C37H37190.0°110.2°
C38C37H37290.0°110.2°
C37C38C3990.0°107.6°
C37C38C4090.0°132.1°
H371C37H37290.0°110.2°
C39C38C4090.0°120.3°
C38C39C4390.0°119.4°
C38C40C4190.0°120.0°
C38C40H4090.0°120.0°
C39C43C4290.0°119.9°
C39C43H4390.0°120.1°
C41C40H4090.0°120.0°
C40C41C4290.0°120.1°
C40C41H4190.0°120.0°
C42C41H4190.0°119.9°
C41C42C4390.0°120.2°
C41C42H4290.0°119.9°
C43C42H4290.0°119.9°
C42C43H4390.0°120.0°
C1'C2'C3'90.0°104.1°
C1'C2'H2'90.0°110.5°
C1'C2'H2''90.0°110.4°
C2'C1'O4'90.0°104.8°
C2'C1'H1'90.0°110.4°
C3'C2'H2'90.0°110.6°
C3'C2'H2''90.0°110.5°
C2'C3'C4'90.0°104.1°
C2'C3'O3'90.0°110.4°
C2'C3'H3'90.0°110.5°
H2'C2'H2''90.0°110.6°
C4'C5'H5'90.0°109.5°
C4'C5'H5''90.0°109.5°
C5'C4'O4'90.0°110.4°
C5'C4'C3'90.0°110.4°
C5'C4'H4'90.0°110.4°
H5'C5'H5''90.0°109.5°
O4'C4'C3'90.0°104.8°
O4'C4'H4'90.0°110.3°
C4'O4'C1'90.0°105.3°
C3'C4'H4'90.0°110.4°
C4'C3'O3'90.0°110.5°
C4'C3'H3'90.0°110.6°
O4'C1'H1'90.0°110.4°
O3'C3'H3'90.0°110.5°
C3'O3'HO3'90.0°114.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OP3POP1OP290.0°120.0°
OP3POP1O5'90.0°120.0°
OP3POP2O5'90.0°120.0°
OP3POP2HOP290.0°60.0°
OP3PO5'C5'90.0°175.0°
HOP3OP3POP190.0°60.1°
HOP3OP3POP290.0°59.9°
HOP3OP3PO5'90.0°179.9°
OP1POP2O5'90.0°120.0°
OP1POP2HOP290.0°180.0°
OP1PO5'C5'90.0°55.0°
OP2PO5'C5'90.0°65.0°
O5'POP2HOP290.0°60.0°
PO5'C5'C4'90.0°180.0°
PO5'C5'H5'90.0°60.0°
PO5'C5'H5''90.0°60.0°
O5'C5'C4'H5'90.0°120.0°
O5'C5'C4'H5''90.0°120.0°
O5'C5'H5'H5''90.0°120.0°
O5'C5'C4'O4'90.0°66.5°
O5'C5'C4'C3'90.0°178.2°
O5'C5'C4'H4'90.0°55.8°
C4N9C8C1'90.0°179.7°
N9C4N3C590.0°179.9°
N9C4N3C290.0°180.0°
N9C4C5C690.0°180.0°
N9C4C5N790.0°0.1°
C4N9C8N790.0°0.0°
C4N9C8N2990.0°179.9°
C4N9C1'C2'90.0°105.1°
C4N9C1'O4'90.0°139.5°
C4N9C1'H1'90.0°17.2°
C8N9C4N390.0°180.0°
C8N9C4C590.0°0.1°
N9C8N7C590.0°0.0°
N9C8N7N2990.0°179.9°
N9C8N29C3290.0°174.8°
N9C8N29H2990.0°5.2°
C8N9C1'C2'90.0°75.3°
C8N9C1'O4'90.0°40.1°
C8N9C1'H1'90.0°162.4°
C1'N9C4N390.0°0.3°
C1'N9C4C590.0°179.7°
C1'N9C8N790.0°179.7°
C1'N9C8N2990.0°0.2°
N9C1'C2'O4'90.0°118.8°
N9C1'C2'H1'90.0°122.3°
N9C1'C2'C3'90.0°142.8°
N9C1'C2'H2'90.0°98.5°
N9C1'C2'H2''90.0°24.1°
N9C1'O4'C4'90.0°159.3°
N9C1'O4'H1'90.0°122.3°
C4N3C2N290.0°180.0°
C4N3C2N190.0°0.0°
N3C4C5C690.0°0.0°
N3C4C5N790.0°180.0°
C5C4N3C290.0°0.0°
C4C5C6N190.0°0.0°
C4C5C6O690.0°180.0°
C4C5C6N790.0°180.0°
C4C5N7C890.0°0.0°
N3C2N2N190.0°180.0°
N3C2N2HN2190.0°0.0°
N3C2N2HN2290.0°180.0°
N3C2N1C690.0°0.0°
N3C2N1HN190.0°180.0°
C2N2HN21HN2290.0°180.0°
N2C2N1C690.0°179.9°
N2C2N1HN190.0°0.0°
N1C2N2HN2190.0°180.0°
N1C2N2HN2290.0°0.0°
C2N1C6HN190.0°179.9°
C2N1C6O690.0°180.0°
C2N1C6C590.0°0.1°
N1C6O6C590.0°179.9°
N1C6C5N790.0°179.9°
HN1N1C6O690.0°0.1°
HN1N1C6C590.0°180.0°
O6C6C5N790.0°0.0°
C6C5N7C890.0°180.0°
C5N7C8N2990.0°179.9°
N7C8N29C3290.0°5.1°
N7C8N29H2990.0°174.8°
C8N29C32C3190.0°150.0°
C8N29C32C3390.0°30.0°
C8N29C32H2990.0°180.0°
C32C31C36H3190.0°179.7°
C31C32C33N2990.0°180.0°
C31C32C33C3490.0°0.1°
C31C32C33H3390.0°179.9°
C32C31C36C3590.0°0.0°
C32C31C36H3690.0°180.0°
C31C32N29H2990.0°30.0°
C36C31C32C3390.0°0.0°
C36C31C32N2990.0°180.0°
C31C36C35C3490.0°0.0°
C31C36C35H3690.0°180.0°
C31C36C35C3990.0°180.0°
H31C31C32C3390.0°179.7°
H31C31C32N2990.0°0.3°
H31C31C36C3590.0°179.7°
H31C31C36H3690.0°0.3°
C32C33C34H3390.0°179.9°
C32C33C34C3590.0°0.1°
C32C33C34C3790.0°180.0°
C33C32N29H2990.0°150.0°
N29C32C33C3490.0°179.9°
N29C32C33H3390.0°0.1°
C33C34C35C3790.0°179.9°
C33C34C35C3690.0°0.0°
C33C34C35C3990.0°180.0°
C33C34C37C3890.0°180.0°
C33C34C37H37190.0°60.9°
C33C34C37H37290.0°60.8°
H33C33C34C3590.0°179.9°
H33C33C34C3790.0°0.1°
C34C35C36C3990.0°180.0°
C34C35C36H3690.0°180.0°
C35C34C37C3890.0°0.0°
C35C34C37H37190.0°119.2°
C35C34C37H37290.0°119.1°
C34C35C39C3890.0°0.0°
C34C35C39C4390.0°180.0°
C37C34C35C3690.0°180.0°
C37C34C35C3990.0°0.0°
C34C37C38H37190.0°119.1°
C34C37C38H37290.0°119.1°
C34C37H371H37290.0°121.7°
C34C37C38C3990.0°0.1°
C34C37C38C4090.0°180.0°
C36C35C39C3890.0°180.0°
C36C35C39C4390.0°0.0°
C39C35C36H3690.0°0.0°
C35C39C38C3790.0°0.0°
C35C39C38C4390.0°180.0°
C35C39C38C4090.0°180.0°
C35C39C43C4290.0°179.9°
C35C39C43H4390.0°0.0°
C38C37H371H37290.0°121.8°
C37C38C39C4090.0°179.9°
C37C38C39C4390.0°180.0°
C37C38C40C4190.0°180.0°
C37C38C40H4090.0°0.1°
H371C37C38C3990.0°119.1°
H371C37C38C4090.0°61.0°
H372C37C38C3990.0°119.1°
H372C37C38C4090.0°60.8°
C39C38C40C4190.0°0.1°
C39C38C40H4090.0°180.0°
C38C39C43C4290.0°0.0°
C38C39C43H4390.0°180.0°
C40C38C39C4390.0°0.1°
C38C40C41H4090.0°179.9°
C38C40C41C4290.0°0.0°
C38C40C41H4190.0°180.0°
C39C43C42C4190.0°0.1°
C39C43C42H4390.0°179.9°
C39C43C42H4290.0°180.0°
C40C41C42H4190.0°180.0°
C40C41C42C4390.0°0.1°
C40C41C42H4290.0°180.0°
H40C40C41C4290.0°179.9°
H40C40C41H4190.0°0.0°
C41C42C43H4290.0°179.9°
C41C42C43H4390.0°179.9°
H41C41C42C4390.0°179.9°
H41C41C42H4290.0°0.0°
H42C42C43H4390.0°0.0°
C1'C2'C3'H2'90.0°118.6°
C1'C2'C3'H2''90.0°118.6°
C1'C2'H2'H2''90.0°122.6°
C2'C1'O4'C4'90.0°40.5°
C1'C2'C3'C4'90.0°0.0°
C2'C1'O4'H1'90.0°118.8°
C1'C2'C3'O3'90.0°118.7°
C1'C2'C3'H3'90.0°118.7°
C3'C2'H2'H2''90.0°122.8°
C2'C3'C4'C5'90.0°142.8°
C2'C3'C4'O4'90.0°24.0°
C2'C3'C4'O3'90.0°118.6°
C2'C3'C4'H3'90.0°118.7°
C2'C3'C4'H4'90.0°94.8°
C3'C2'C1'O4'90.0°23.9°
C3'C2'C1'H1'90.0°94.9°
C2'C3'O3'H3'90.0°122.6°
C2'C3'O3'HO3'90.0°61.5°
H2'C2'C3'C4'90.0°118.6°
H2'C2'C1'O4'90.0°142.6°
H2'C2'C1'H1'90.0°23.8°
H2'C2'C3'O3'90.0°0.0°
H2'C2'C3'H3'90.0°122.7°
H2''C2'C3'C4'90.0°118.6°
H2''C2'C1'O4'90.0°94.7°
H2''C2'C1'H1'90.0°146.4°
H2''C2'C3'O3'90.0°122.7°
H2''C2'C3'H3'90.0°0.1°
C4'C5'H5'H5''90.0°120.0°
C5'C4'O4'C3'90.0°118.8°
C5'C4'O4'H4'90.0°122.3°
C5'C4'C3'H4'90.0°122.3°
C5'C4'O4'C1'90.0°159.3°
C5'C4'C3'O3'90.0°98.6°
C5'C4'C3'H3'90.0°24.2°
H5'C5'C4'O4'90.0°53.5°
H5'C5'C4'C3'90.0°61.8°
H5'C5'C4'H4'90.0°175.8°
H5''C5'C4'O4'90.0°173.5°
H5''C5'C4'C3'90.0°58.2°
H5''C5'C4'H4'90.0°64.2°
O4'C4'C3'H4'90.0°118.8°
C4'O4'C1'H1'90.0°78.4°
O4'C4'C3'O3'90.0°142.6°
O4'C4'C3'H3'90.0°94.7°
C3'C4'O4'C1'90.0°40.5°
C4'C3'O3'H3'90.0°122.7°
C4'C3'O3'HO3'90.0°176.1°
H4'C4'O4'C1'90.0°78.4°
H4'C4'C3'O3'90.0°23.8°
H4'C4'C3'H3'90.0°146.5°
H3'C3'O3'HO3'90.0°61.1°

223532

PDB entries from 2024-08-07

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