AFC
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | H | sing | 1.01Å | 1.00Å | |
N | CA | sing | 1.47Å | 1.45Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CA | CG | sing | 1.53Å | 1.55Å | |
CA | CB | sing | 1.53Å | 1.55Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
CB | HB3 | sing | 1.09Å | 1.10Å | |
CB | CD | sing | 1.53Å | 1.54Å | |
C | CG | sing | 1.51Å | 1.50Å | |
C | O | doub | 1.21Å | 1.23Å | |
CD | HD1 | sing | 1.09Å | 1.10Å | |
CD | HD2 | sing | 1.09Å | 1.10Å | |
CD | CE | sing | 1.53Å | 1.54Å | |
CE | HE1 | sing | 1.09Å | 1.10Å | |
CE | HE2 | sing | 1.09Å | 1.10Å | |
CE | CF | sing | 1.53Å | 1.54Å | |
CF | HF1 | sing | 1.09Å | 1.10Å | |
CF | HF2 | sing | 1.09Å | 1.10Å | |
CF | CI | sing | 1.53Å | 1.54Å | |
CI | HI1 | sing | 1.09Å | 1.10Å | |
CI | HI2 | sing | 1.09Å | 1.10Å | |
CI | CJ | sing | 1.53Å | 1.54Å | |
CJ | HJ1 | sing | 1.09Å | 1.10Å | |
CJ | HJ2 | sing | 1.09Å | 1.10Å | |
CJ | CK | sing | 1.53Å | 1.54Å | |
CK | HK1 | sing | 1.09Å | 1.10Å | |
CK | HK2 | sing | 1.09Å | 1.10Å | |
CK | CL | sing | 1.53Å | 1.54Å | |
CL | HL1 | sing | 1.09Å | 1.10Å | |
CL | HL2 | sing | 1.09Å | 1.10Å | |
CL | CM | sing | 1.53Å | 1.55Å | |
CM | HM | sing | 1.09Å | 1.10Å | |
CM | CN2 | sing | 1.53Å | 1.54Å | |
CM | CN1 | sing | 1.53Å | 1.55Å | |
CN2 | HN21 | sing | 1.09Å | 1.10Å | |
CN2 | HN22 | sing | 1.09Å | 1.10Å | |
CN2 | HN23 | sing | 1.09Å | 1.10Å | |
CN1 | HN11 | sing | 1.09Å | 1.10Å | |
CN1 | HN12 | sing | 1.09Å | 1.10Å | |
CN1 | CO1 | sing | 1.53Å | 1.54Å | |
CO1 | HO11 | sing | 1.09Å | 1.10Å | |
CO1 | HO12 | sing | 1.09Å | 1.10Å | |
CO1 | HO13 | sing | 1.09Å | 1.10Å | |
CG | HG1 | sing | 1.09Å | 1.10Å | |
CG | HG2 | sing | 1.09Å | 1.10Å | |
OXT | C | sing | 1.34Å | 1.43Å | |
H2 | N | sing | 1.01Å | 1.00Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
H | N | CA | 109.5° | 111.0° |
H | N | H2 | 109.5° | 111.0° |
N | CA | HA | 104.1° | 109.5° |
N | CA | CG | 114.4° | 109.5° |
N | CA | CB | 110.4° | 109.5° |
CA | N | H2 | 109.4° | 111.1° |
HA | CA | CG | 109.8° | 109.4° |
HA | CA | CB | 113.8° | 109.5° |
CG | CA | CB | 104.8° | 109.5° |
CA | CG | C | 111.0° | 109.5° |
CA | CG | HG1 | 109.0° | 109.5° |
CA | CG | HG2 | 109.0° | 109.5° |
CA | CB | HB2 | 108.0° | 109.5° |
CA | CB | HB3 | 108.0° | 109.5° |
CA | CB | CD | 114.0° | 109.5° |
HB2 | CB | HB3 | 110.9° | 109.5° |
HB2 | CB | CD | 108.0° | 109.5° |
HB3 | CB | CD | 108.0° | 109.4° |
CB | CD | HD1 | 108.0° | 109.5° |
CB | CD | HD2 | 107.9° | 109.4° |
CB | CD | CE | 114.1° | 109.5° |
CG | C | O | 121.3° | 120.0° |
C | CG | HG1 | 108.9° | 109.4° |
C | CG | HG2 | 109.0° | 109.4° |
CG | C | OXT | 119.3° | 120.0° |
O | C | OXT | 119.4° | 120.0° |
HD1 | CD | HD2 | 110.9° | 109.5° |
HD1 | CD | CE | 108.0° | 109.5° |
HD2 | CD | CE | 108.0° | 109.4° |
CD | CE | HE1 | 108.1° | 109.5° |
CD | CE | HE2 | 108.1° | 109.4° |
CD | CE | CF | 113.7° | 109.5° |
HE1 | CE | HE2 | 110.9° | 109.5° |
HE1 | CE | CF | 108.1° | 109.5° |
HE2 | CE | CF | 108.1° | 109.4° |
CE | CF | HF1 | 108.0° | 109.5° |
CE | CF | HF2 | 108.0° | 109.4° |
CE | CF | CI | 113.9° | 109.5° |
HF1 | CF | HF2 | 110.9° | 109.5° |
HF1 | CF | CI | 108.0° | 109.4° |
HF2 | CF | CI | 108.1° | 109.5° |
CF | CI | HI1 | 108.2° | 109.4° |
CF | CI | HI2 | 108.2° | 109.5° |
CF | CI | CJ | 113.4° | 109.4° |
HI1 | CI | HI2 | 110.8° | 109.5° |
HI1 | CI | CJ | 108.2° | 109.5° |
HI2 | CI | CJ | 108.2° | 109.5° |
CI | CJ | HJ1 | 108.0° | 109.4° |
CI | CJ | HJ2 | 108.0° | 109.5° |
CI | CJ | CK | 113.8° | 109.4° |
HJ1 | CJ | HJ2 | 110.9° | 109.5° |
HJ1 | CJ | CK | 108.0° | 109.5° |
HJ2 | CJ | CK | 108.1° | 109.5° |
CJ | CK | HK1 | 107.9° | 109.4° |
CJ | CK | HK2 | 107.9° | 109.5° |
CJ | CK | CL | 114.4° | 109.4° |
HK1 | CK | HK2 | 111.0° | 109.5° |
HK1 | CK | CL | 107.9° | 109.5° |
HK2 | CK | CL | 107.9° | 109.5° |
CK | CL | HL1 | 107.9° | 109.4° |
CK | CL | HL2 | 107.9° | 109.5° |
CK | CL | CM | 114.2° | 109.4° |
HL1 | CL | HL2 | 111.0° | 109.5° |
HL1 | CL | CM | 107.9° | 109.5° |
HL2 | CL | CM | 107.9° | 109.5° |
CL | CM | HM | 108.3° | 109.5° |
CL | CM | CN2 | 113.0° | 109.5° |
CL | CM | CN1 | 109.5° | 109.4° |
HM | CM | CN2 | 104.5° | 109.5° |
HM | CM | CN1 | 108.4° | 109.5° |
CN2 | CM | CN1 | 112.9° | 109.5° |
CM | CN2 | HN21 | 109.5° | 109.5° |
CM | CN2 | HN22 | 109.5° | 109.4° |
CM | CN2 | HN23 | 109.5° | 109.5° |
CM | CN1 | HN11 | 107.6° | 109.5° |
CM | CN1 | HN12 | 107.6° | 109.5° |
CM | CN1 | CO1 | 115.2° | 109.5° |
HN21 | CN2 | HN22 | 109.4° | 109.5° |
HN21 | CN2 | HN23 | 109.5° | 109.5° |
HN22 | CN2 | HN23 | 109.5° | 109.5° |
HN11 | CN1 | HN12 | 111.3° | 109.4° |
HN11 | CN1 | CO1 | 107.6° | 109.4° |
HN12 | CN1 | CO1 | 107.6° | 109.5° |
CN1 | CO1 | HO11 | 109.5° | 109.4° |
CN1 | CO1 | HO12 | 109.4° | 109.5° |
CN1 | CO1 | HO13 | 109.5° | 109.5° |
HO11 | CO1 | HO12 | 109.5° | 109.5° |
HO11 | CO1 | HO13 | 109.4° | 109.5° |
HO12 | CO1 | HO13 | 109.5° | 109.5° |
HG1 | CG | HG2 | 110.0° | 109.5° |
C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
H | N | CA | H2 | 120.0° | 124.0° |
H | N | CA | HA | 60.3° | 179.9° |
H | N | CA | CG | 180.0° | 60.0° |
H | N | CA | CB | 62.2° | 60.0° |
N | CA | HA | CG | 122.8° | 120.0° |
N | CA | HA | CB | 120.2° | 120.1° |
N | CA | CG | CB | 121.0° | 120.1° |
N | CA | CB | HB2 | 84.9° | 175.0° |
N | CA | CB | HB3 | 35.1° | 54.9° |
N | CA | CB | CD | 155.1° | 65.0° |
N | CA | CG | C | 77.0° | 65.0° |
N | CA | CG | HG1 | 43.0° | 55.0° |
N | CA | CG | HG2 | 163.0° | 175.1° |
HA | CA | CG | CB | 122.5° | 120.0° |
HA | CA | CB | HB2 | 158.5° | 64.9° |
HA | CA | CB | HB3 | 81.5° | 175.0° |
HA | CA | CB | CD | 38.5° | 55.1° |
HA | CA | CG | C | 39.5° | 55.0° |
HA | CA | CG | HG1 | 159.5° | 175.0° |
HA | CA | CG | HG2 | 80.5° | 65.0° |
HA | CA | N | H2 | 179.7° | 56.0° |
CG | CA | CB | HB2 | 38.6° | 55.0° |
CG | CA | CB | HB3 | 158.6° | 65.1° |
CG | CA | CB | CD | 81.4° | 175.0° |
CA | CG | C | HG1 | 120.0° | 120.1° |
CA | CG | C | HG2 | 120.0° | 120.0° |
CA | CG | C | O | 103.5° | 0.0° |
CA | CG | HG1 | HG2 | 119.4° | 120.0° |
CA | CG | C | OXT | 76.5° | 180.0° |
CG | CA | N | H2 | 60.0° | 63.9° |
CA | CB | HB2 | HB3 | 118.1° | 120.1° |
CA | CB | HB2 | CD | 123.8° | 120.0° |
CA | CB | HB3 | CD | 123.8° | 119.9° |
CB | CA | CG | C | 162.0° | 175.0° |
CA | CB | CD | HD1 | 91.9° | 60.0° |
CA | CB | CD | HD2 | 28.1° | 60.1° |
CA | CB | CD | CE | 148.1° | 180.0° |
CB | CA | CG | HG1 | 78.0° | 65.0° |
CB | CA | CG | HG2 | 42.0° | 55.0° |
CB | CA | N | H2 | 57.8° | 176.0° |
HB2 | CB | HB3 | CD | 118.1° | 120.0° |
HB2 | CB | CD | HD1 | 148.1° | 180.0° |
HB2 | CB | CD | HD2 | 91.9° | 60.0° |
HB2 | CB | CD | CE | 28.1° | 60.0° |
HB3 | CB | CD | HD1 | 28.1° | 60.0° |
HB3 | CB | CD | HD2 | 148.1° | 180.0° |
HB3 | CB | CD | CE | 91.9° | 60.0° |
CB | CD | HD1 | HD2 | 118.1° | 120.0° |
CB | CD | HD1 | CE | 123.8° | 120.0° |
CB | CD | HD2 | CE | 123.8° | 120.0° |
CB | CD | CE | HE1 | 39.7° | 60.0° |
CB | CD | CE | HE2 | 159.8° | 60.1° |
CB | CD | CE | CF | 80.3° | 180.0° |
CG | C | O | OXT | 180.0° | 179.9° |
C | CG | HG1 | HG2 | 119.4° | 119.9° |
CG | C | OXT | HXT | 180.0° | 180.0° |
O | C | CG | HG1 | 136.5° | 120.1° |
O | C | CG | HG2 | 16.5° | 120.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
HD1 | CD | HD2 | CE | 118.1° | 120.0° |
HD1 | CD | CE | HE1 | 80.3° | 180.0° |
HD1 | CD | CE | HE2 | 39.7° | 60.0° |
HD1 | CD | CE | CF | 159.7° | 60.0° |
HD2 | CD | CE | HE1 | 159.7° | 60.0° |
HD2 | CD | CE | HE2 | 80.3° | 180.0° |
HD2 | CD | CE | CF | 39.7° | 60.1° |
CD | CE | HE1 | HE2 | 118.3° | 120.0° |
CD | CE | HE1 | CF | 123.5° | 120.0° |
CD | CE | HE2 | CF | 123.5° | 120.0° |
CD | CE | CF | HF1 | 25.9° | 60.0° |
CD | CE | CF | HF2 | 145.9° | 60.1° |
CD | CE | CF | CI | 94.1° | 180.0° |
HE1 | CE | HE2 | CF | 118.2° | 120.0° |
HE1 | CE | CF | HF1 | 94.1° | 179.9° |
HE1 | CE | CF | HF2 | 25.8° | 60.0° |
HE1 | CE | CF | CI | 145.9° | 60.0° |
HE2 | CE | CF | HF1 | 145.8° | 59.9° |
HE2 | CE | CF | HF2 | 94.2° | 180.0° |
HE2 | CE | CF | CI | 25.9° | 60.0° |
CE | CF | HF1 | HF2 | 118.2° | 120.0° |
CE | CF | HF1 | CI | 123.6° | 120.0° |
CE | CF | HF2 | CI | 123.6° | 120.0° |
CE | CF | CI | HI1 | 32.3° | 60.0° |
CE | CF | CI | HI2 | 152.3° | 60.0° |
CE | CF | CI | CJ | 87.7° | 180.0° |
HF1 | CF | HF2 | CI | 118.2° | 120.0° |
HF1 | CF | CI | HI1 | 87.7° | 180.0° |
HF1 | CF | CI | HI2 | 32.3° | 60.0° |
HF1 | CF | CI | CJ | 152.3° | 60.0° |
HF2 | CF | CI | HI1 | 152.3° | 60.0° |
HF2 | CF | CI | HI2 | 87.7° | 180.0° |
HF2 | CF | CI | CJ | 32.3° | 60.0° |
CF | CI | HI1 | HI2 | 118.4° | 120.0° |
CF | CI | HI1 | CJ | 123.2° | 119.9° |
CF | CI | HI2 | CJ | 123.2° | 120.0° |
CF | CI | CJ | HJ1 | 36.2° | 60.0° |
CF | CI | CJ | HJ2 | 83.8° | 60.0° |
CF | CI | CJ | CK | 156.2° | 180.0° |
HI1 | CI | HI2 | CJ | 118.4° | 120.0° |
HI1 | CI | CJ | HJ1 | 156.2° | 180.0° |
HI1 | CI | CJ | HJ2 | 36.2° | 59.9° |
HI1 | CI | CJ | CK | 83.8° | 60.1° |
HI2 | CI | CJ | HJ1 | 83.8° | 60.0° |
HI2 | CI | CJ | HJ2 | 156.2° | 180.0° |
HI2 | CI | CJ | CK | 36.2° | 60.0° |
CI | CJ | HJ1 | HJ2 | 118.2° | 120.0° |
CI | CJ | HJ1 | CK | 123.6° | 119.9° |
CI | CJ | HJ2 | CK | 123.6° | 120.0° |
CI | CJ | CK | HK1 | 33.7° | 60.0° |
CI | CJ | CK | HK2 | 153.7° | 60.0° |
CI | CJ | CK | CL | 86.3° | 180.0° |
HJ1 | CJ | HJ2 | CK | 118.2° | 120.0° |
HJ1 | CJ | CK | HK1 | 86.3° | 180.0° |
HJ1 | CJ | CK | HK2 | 33.7° | 60.0° |
HJ1 | CJ | CK | CL | 153.7° | 60.1° |
HJ2 | CJ | CK | HK1 | 153.7° | 60.0° |
HJ2 | CJ | CK | HK2 | 86.3° | 180.0° |
HJ2 | CJ | CK | CL | 33.7° | 60.0° |
CJ | CK | HK1 | HK2 | 118.0° | 120.0° |
CJ | CK | HK1 | CL | 124.0° | 119.9° |
CJ | CK | HK2 | CL | 124.0° | 120.0° |
CJ | CK | CL | HL1 | 16.0° | 60.0° |
CJ | CK | CL | HL2 | 135.9° | 60.0° |
CJ | CK | CL | CM | 104.0° | 180.0° |
HK1 | CK | HK2 | CL | 118.0° | 120.0° |
HK1 | CK | CL | HL1 | 104.0° | 180.0° |
HK1 | CK | CL | HL2 | 16.0° | 59.9° |
HK1 | CK | CL | CM | 136.0° | 60.1° |
HK2 | CK | CL | HL1 | 136.0° | 60.0° |
HK2 | CK | CL | HL2 | 104.0° | 180.0° |
HK2 | CK | CL | CM | 16.0° | 60.0° |
CK | CL | HL1 | HL2 | 118.0° | 120.0° |
CK | CL | HL1 | CM | 123.9° | 119.9° |
CK | CL | HL2 | CM | 123.9° | 120.0° |
CK | CL | CM | HM | 21.7° | 55.0° |
CK | CL | CM | CN2 | 136.9° | 65.0° |
CK | CL | CM | CN1 | 96.2° | 175.0° |
HL1 | CL | HL2 | CM | 118.1° | 120.0° |
HL1 | CL | CM | HM | 141.7° | 65.0° |
HL1 | CL | CM | CN2 | 103.1° | 175.0° |
HL1 | CL | CM | CN1 | 23.7° | 55.0° |
HL2 | CL | CM | HM | 98.3° | 175.0° |
HL2 | CL | CM | CN2 | 16.9° | 55.0° |
HL2 | CL | CM | CN1 | 143.7° | 65.0° |
CL | CM | HM | CN2 | 120.7° | 120.0° |
CL | CM | HM | CN1 | 118.7° | 120.0° |
CL | CM | CN2 | CN1 | 125.0° | 120.0° |
CL | CM | CN2 | HN21 | 180.0° | 180.0° |
CL | CM | CN2 | HN22 | 60.0° | 60.0° |
CL | CM | CN2 | HN23 | 60.0° | 60.0° |
CL | CM | CN1 | HN11 | 170.3° | 55.0° |
CL | CM | CN1 | HN12 | 50.3° | 65.0° |
CL | CM | CN1 | CO1 | 69.7° | 175.0° |
HM | CM | CN2 | CN1 | 117.6° | 120.0° |
HM | CM | CN2 | HN21 | 62.5° | 60.0° |
HM | CM | CN2 | HN22 | 177.5° | 179.9° |
HM | CM | CN2 | HN23 | 57.5° | 60.0° |
HM | CM | CN1 | HN11 | 52.4° | 65.0° |
HM | CM | CN1 | HN12 | 67.6° | 175.0° |
HM | CM | CN1 | CO1 | 172.4° | 55.0° |
CM | CN2 | HN21 | HN22 | 120.0° | 120.0° |
CM | CN2 | HN21 | HN23 | 120.0° | 120.0° |
CM | CN2 | HN22 | HN23 | 120.0° | 120.0° |
CN2 | CM | CN1 | HN11 | 62.8° | 175.0° |
CN2 | CM | CN1 | HN12 | 177.2° | 55.0° |
CN2 | CM | CN1 | CO1 | 57.2° | 65.0° |
CN1 | CM | CN2 | HN21 | 55.0° | 60.0° |
CN1 | CM | CN2 | HN22 | 65.0° | 60.0° |
CN1 | CM | CN2 | HN23 | 175.0° | 180.0° |
CM | CN1 | HN11 | HN12 | 117.7° | 120.1° |
CM | CN1 | HN11 | CO1 | 124.7° | 120.0° |
CM | CN1 | HN12 | CO1 | 124.7° | 120.0° |
CM | CN1 | CO1 | HO11 | 180.0° | 60.0° |
CM | CN1 | CO1 | HO12 | 60.0° | 60.0° |
CM | CN1 | CO1 | HO13 | 60.0° | 180.0° |
HN21 | CN2 | HN22 | HN23 | 120.0° | 120.0° |
HN11 | CN1 | HN12 | CO1 | 117.7° | 119.9° |
HN11 | CN1 | CO1 | HO11 | 60.0° | 180.0° |
HN11 | CN1 | CO1 | HO12 | 180.0° | 60.1° |
HN11 | CN1 | CO1 | HO13 | 60.0° | 60.0° |
HN12 | CN1 | CO1 | HO11 | 60.0° | 60.0° |
HN12 | CN1 | CO1 | HO12 | 60.0° | 180.0° |
HN12 | CN1 | CO1 | HO13 | 180.0° | 59.9° |
CN1 | CO1 | HO11 | HO12 | 120.0° | 120.0° |
CN1 | CO1 | HO11 | HO13 | 120.0° | 120.0° |
CN1 | CO1 | HO12 | HO13 | 120.0° | 120.1° |
HO11 | CO1 | HO12 | HO13 | 120.0° | 120.0° |
HG1 | CG | C | OXT | 43.5° | 60.0° |
HG2 | CG | C | OXT | 163.5° | 60.0° |