ADT
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N1 | C2 | sing | 1.34Å | 1.39Å | |
| N1 | C6 | sing | 1.37Å | 1.42Å | |
| N1 | C1' | sing | 1.46Å | 1.56Å | |
| C2 | O2 | doub | 1.22Å | 1.21Å | |
| C2 | N3 | sing | 1.35Å | 1.40Å | |
| N3 | C4 | sing | 1.35Å | 1.39Å | |
| N3 | HN3 | sing | 0.97Å | 1.02Å | |
| C4 | O4 | doub | 1.22Å | 1.23Å | |
| C4 | C5 | sing | 1.41Å | 1.45Å | |
| C5 | C5M | sing | 1.51Å | 1.54Å | |
| C5 | C6 | doub | 1.35Å | 1.38Å | |
| C5M | HM51 | sing | 1.09Å | 1.12Å | |
| C5M | HM52 | sing | 1.09Å | 1.12Å | |
| C5M | HM53 | sing | 1.09Å | 1.11Å | |
| C6 | H6 | sing | 1.08Å | 1.10Å | |
| C1' | O4' | sing | 1.44Å | 1.46Å | |
| C1' | C2' | sing | 1.54Å | 1.56Å | |
| C1' | H1' | sing | 1.09Å | 1.11Å | |
| O4' | C4' | sing | 1.45Å | 1.49Å | |
| C4' | C5' | sing | 1.53Å | 1.54Å | |
| C4' | C3' | sing | 1.54Å | 1.49Å | |
| C4' | H4' | sing | 1.09Å | 1.11Å | |
| C5' | O5' | sing | 1.43Å | 1.42Å | |
| C5' | H5'1 | sing | 1.09Å | 1.12Å | |
| C5' | H5'2 | sing | 1.09Å | 1.12Å | |
| O5' | HO5' | sing | 0.97Å | 0.95Å | |
| C3' | N3' | sing | 1.46Å | 1.49Å | |
| C3' | C2' | sing | 1.55Å | 1.53Å | |
| C3' | H3' | sing | 1.09Å | 1.12Å | |
| N3' | C8' | sing | 1.35Å | 1.34Å | |
| N3' | HN3' | sing | 0.97Å | 1.02Å | |
| C8' | O8' | doub | 1.21Å | 1.25Å | |
| C8' | C9' | sing | 1.51Å | 1.50Å | |
| C9' | H9'1 | sing | 1.09Å | 1.12Å | |
| C9' | H9'2 | sing | 1.09Å | 1.11Å | |
| C9' | H9'3 | sing | 1.09Å | 1.11Å | |
| C2' | H2'1 | sing | 1.09Å | 1.11Å | |
| C2' | H2'2 | sing | 1.09Å | 1.12Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C2 | N1 | C6 | 119.6° | 120.6° |
| C2 | N1 | C1' | 117.0° | 119.7° |
| N1 | C2 | O2 | 118.5° | 119.5° |
| N1 | C2 | N3 | 118.7° | 120.9° |
| C6 | N1 | C1' | 123.3° | 119.7° |
| N1 | C6 | C5 | 120.4° | 119.7° |
| N1 | C6 | H6 | 121.1° | 120.1° |
| N1 | C1' | O4' | 105.4° | 110.4° |
| N1 | C1' | C2' | 117.8° | 110.4° |
| N1 | C1' | H1' | 105.4° | 110.4° |
| O2 | C2 | N3 | 122.9° | 119.6° |
| C2 | N3 | C4 | 124.8° | 120.3° |
| C2 | N3 | HN3 | 118.0° | 119.8° |
| C4 | N3 | HN3 | 117.2° | 119.9° |
| N3 | C4 | O4 | 119.4° | 120.3° |
| N3 | C4 | C5 | 115.1° | 119.4° |
| O4 | C4 | C5 | 125.5° | 120.3° |
| C4 | C5 | C5M | 117.8° | 120.4° |
| C4 | C5 | C6 | 121.4° | 119.2° |
| C5M | C5 | C6 | 120.8° | 120.4° |
| C5 | C5M | HM51 | 117.8° | 109.5° |
| C5 | C5M | HM52 | 109.2° | 109.5° |
| C5 | C5M | HM53 | 109.2° | 109.5° |
| C5 | C6 | H6 | 118.5° | 120.2° |
| HM51 | C5M | HM52 | 109.1° | 109.4° |
| HM51 | C5M | HM53 | 109.3° | 109.4° |
| HM52 | C5M | HM53 | 100.9° | 109.4° |
| O4' | C1' | C2' | 104.9° | 104.8° |
| O4' | C1' | H1' | 118.2° | 110.3° |
| C1' | O4' | C4' | 110.7° | 105.4° |
| C2' | C1' | H1' | 105.8° | 110.4° |
| C1' | C2' | C3' | 105.2° | 104.1° |
| C1' | C2' | H2'1 | 113.9° | 110.6° |
| C1' | C2' | H2'2 | 113.8° | 110.5° |
| O4' | C4' | C5' | 106.8° | 110.4° |
| O4' | C4' | C3' | 105.7° | 104.7° |
| O4' | C4' | H4' | 115.7° | 110.4° |
| C5' | C4' | C3' | 115.0° | 110.7° |
| C5' | C4' | H4' | 106.4° | 110.3° |
| C4' | C5' | O5' | 109.1° | 109.5° |
| C4' | C5' | H5'1 | 112.4° | 109.5° |
| C4' | C5' | H5'2 | 112.4° | 109.5° |
| C3' | C4' | H4' | 107.5° | 110.2° |
| C4' | C3' | N3' | 111.7° | 110.6° |
| C4' | C3' | C2' | 104.3° | 104.2° |
| C4' | C3' | H3' | 112.8° | 110.5° |
| O5' | C5' | H5'1 | 112.4° | 109.4° |
| O5' | C5' | H5'2 | 112.4° | 109.4° |
| C5' | O5' | HO5' | 109.0° | 106.9° |
| H5'1 | C5' | H5'2 | 98.0° | 109.4° |
| N3' | C3' | C2' | 113.4° | 110.5° |
| N3' | C3' | H3' | 103.6° | 110.4° |
| C3' | N3' | C8' | 114.9° | 120.0° |
| C3' | N3' | HN3' | 127.2° | 120.0° |
| C2' | C3' | H3' | 111.2° | 110.5° |
| C3' | C2' | H2'1 | 113.8° | 110.5° |
| C3' | C2' | H2'2 | 113.8° | 110.5° |
| C8' | N3' | HN3' | 117.9° | 120.0° |
| N3' | C8' | O8' | 119.3° | 120.0° |
| N3' | C8' | C9' | 117.9° | 120.0° |
| O8' | C8' | C9' | 122.7° | 120.0° |
| C8' | C9' | H9'1 | 117.9° | 109.5° |
| C8' | C9' | H9'2 | 109.2° | 109.4° |
| C8' | C9' | H9'3 | 109.2° | 109.4° |
| H9'1 | C9' | H9'2 | 109.1° | 109.5° |
| H9'1 | C9' | H9'3 | 109.2° | 109.5° |
| H9'2 | C9' | H9'3 | 101.0° | 109.5° |
| H2'1 | C2' | H2'2 | 96.6° | 110.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C2 | N1 | C6 | C1' | 176.8° | 179.8° |
| N1 | C2 | O2 | N3 | 179.4° | 179.5° |
| N1 | C2 | N3 | C4 | 0.0° | 0.6° |
| N1 | C2 | N3 | HN3 | 180.0° | 179.8° |
| C2 | N1 | C6 | C5 | 2.4° | 0.2° |
| C2 | N1 | C6 | H6 | 177.7° | 179.8° |
| C2 | N1 | C1' | O4' | 169.2° | 55.2° |
| C2 | N1 | C1' | C2' | 74.3° | 60.1° |
| C2 | N1 | C1' | H1' | 43.4° | 177.5° |
| C6 | N1 | C2 | O2 | 177.6° | 180.0° |
| C6 | N1 | C2 | N3 | 1.8° | 0.5° |
| N1 | C6 | C5 | C4 | 1.0° | 0.0° |
| N1 | C6 | C5 | C5M | 178.6° | 180.0° |
| N1 | C6 | C5 | H6 | 179.9° | 180.0° |
| C6 | N1 | C1' | O4' | 7.7° | 124.6° |
| C6 | N1 | C1' | C2' | 108.8° | 120.0° |
| C6 | N1 | C1' | H1' | 133.4° | 2.4° |
| C1' | N1 | C2 | O2 | 0.7° | 0.2° |
| C1' | N1 | C2 | N3 | 178.8° | 179.7° |
| C1' | N1 | C6 | C5 | 179.1° | 180.0° |
| C1' | N1 | C6 | H6 | 0.9° | 0.0° |
| N1 | C1' | O4' | C2' | 125.0° | 118.9° |
| N1 | C1' | O4' | H1' | 117.4° | 122.3° |
| N1 | C1' | C2' | H1' | 117.5° | 122.4° |
| N1 | C1' | O4' | C4' | 126.2° | 159.3° |
| N1 | C1' | C2' | C3' | 99.6° | 142.9° |
| N1 | C1' | C2' | H2'1 | 135.1° | 24.2° |
| N1 | C1' | C2' | H2'2 | 25.6° | 98.5° |
| O2 | C2 | N3 | C4 | 179.5° | 179.9° |
| O2 | C2 | N3 | HN3 | 0.6° | 0.3° |
| C2 | N3 | C4 | HN3 | 180.0° | 179.6° |
| C2 | N3 | C4 | O4 | 179.3° | 179.7° |
| C2 | N3 | C4 | C5 | 1.4° | 0.4° |
| N3 | C4 | O4 | C5 | 179.2° | 179.9° |
| N3 | C4 | C5 | C5M | 179.6° | 179.9° |
| N3 | C4 | C5 | C6 | 0.8° | 0.1° |
| HN3 | N3 | C4 | O4 | 0.6° | 0.1° |
| HN3 | N3 | C4 | C5 | 178.7° | 180.0° |
| O4 | C4 | C5 | C5M | 0.3° | 0.1° |
| O4 | C4 | C5 | C6 | 179.9° | 180.0° |
| C4 | C5 | C5M | C6 | 179.6° | 180.0° |
| C4 | C5 | C5M | HM51 | 180.0° | 0.0° |
| C4 | C5 | C5M | HM52 | 54.8° | 120.1° |
| C4 | C5 | C5M | HM53 | 54.7° | 120.0° |
| C4 | C5 | C6 | H6 | 179.1° | 180.0° |
| C5 | C5M | HM51 | HM52 | 125.2° | 120.1° |
| C5 | C5M | HM51 | HM53 | 125.3° | 120.0° |
| C5 | C5M | HM52 | HM53 | 115.0° | 120.0° |
| C5M | C5 | C6 | H6 | 1.4° | 0.0° |
| C6 | C5 | C5M | HM51 | 0.4° | 180.0° |
| C6 | C5 | C5M | HM52 | 124.8° | 60.0° |
| C6 | C5 | C5M | HM53 | 125.7° | 60.0° |
| HM51 | C5M | HM52 | HM53 | 115.0° | 119.9° |
| O4' | C1' | C2' | H1' | 125.7° | 118.8° |
| C1' | O4' | C4' | C5' | 142.7° | 159.5° |
| C1' | O4' | C4' | C3' | 19.7° | 40.3° |
| C1' | O4' | C4' | H4' | 99.1° | 78.3° |
| O4' | C1' | C2' | C3' | 17.1° | 24.0° |
| O4' | C1' | C2' | H2'1 | 108.2° | 94.7° |
| O4' | C1' | C2' | H2'2 | 142.4° | 142.6° |
| C2' | C1' | O4' | C4' | 1.2° | 40.4° |
| C1' | C2' | C3' | C4' | 28.9° | 0.1° |
| C1' | C2' | C3' | N3' | 150.7° | 118.6° |
| C1' | C2' | C3' | H2'1 | 125.3° | 118.7° |
| C1' | C2' | C3' | H2'2 | 125.3° | 118.7° |
| C1' | C2' | C3' | H3' | 93.0° | 118.9° |
| C1' | C2' | H2'1 | H2'2 | 119.8° | 122.7° |
| H1' | C1' | O4' | C4' | 116.4° | 78.4° |
| H1' | C1' | C2' | C3' | 142.8° | 94.8° |
| H1' | C1' | C2' | H2'1 | 17.6° | 146.5° |
| H1' | C1' | C2' | H2'2 | 91.9° | 23.9° |
| O4' | C4' | C5' | C3' | 116.9° | 115.5° |
| O4' | C4' | C5' | H4' | 124.1° | 122.3° |
| O4' | C4' | C3' | H4' | 124.1° | 118.7° |
| O4' | C4' | C5' | O5' | 45.1° | 61.4° |
| O4' | C4' | C5' | H5'1 | 170.4° | 178.5° |
| O4' | C4' | C5' | H5'2 | 80.2° | 58.6° |
| O4' | C4' | C3' | N3' | 152.5° | 142.5° |
| O4' | C4' | C3' | C2' | 29.6° | 23.7° |
| O4' | C4' | C3' | H3' | 91.2° | 94.9° |
| C5' | C4' | C3' | H4' | 118.3° | 122.3° |
| C4' | C5' | O5' | H5'1 | 125.3° | 120.1° |
| C4' | C5' | O5' | H5'2 | 125.3° | 120.0° |
| C4' | C5' | H5'1 | H5'2 | 118.3° | 120.0° |
| C4' | C5' | O5' | HO5' | 180.0° | 180.0° |
| C5' | C4' | C3' | N3' | 89.9° | 98.5° |
| C5' | C4' | C3' | C2' | 147.2° | 142.7° |
| C5' | C4' | C3' | H3' | 26.4° | 24.1° |
| C3' | C4' | C5' | O5' | 162.0° | 176.9° |
| C3' | C4' | C5' | H5'1 | 72.7° | 63.0° |
| C3' | C4' | C5' | H5'2 | 36.7° | 56.9° |
| C4' | C3' | N3' | C2' | 117.5° | 114.8° |
| C4' | C3' | N3' | H3' | 121.8° | 122.7° |
| C4' | C3' | C2' | H3' | 121.9° | 118.7° |
| C4' | C3' | N3' | C8' | 149.0° | 151.9° |
| C4' | C3' | N3' | HN3' | 31.0° | 28.1° |
| C4' | C3' | C2' | H2'1 | 96.4° | 118.6° |
| C4' | C3' | C2' | H2'2 | 154.2° | 118.8° |
| H4' | C4' | C5' | O5' | 79.0° | 60.9° |
| H4' | C4' | C5' | H5'1 | 46.3° | 59.2° |
| H4' | C4' | C5' | H5'2 | 155.7° | 179.1° |
| H4' | C4' | C3' | N3' | 28.4° | 23.8° |
| H4' | C4' | C3' | C2' | 94.5° | 95.0° |
| H4' | C4' | C3' | H3' | 144.7° | 146.4° |
| O5' | C5' | H5'1 | H5'2 | 118.3° | 119.9° |
| H5'1 | C5' | O5' | HO5' | 54.7° | 59.9° |
| H5'2 | C5' | O5' | HO5' | 54.7° | 60.0° |
| N3' | C3' | C2' | H3' | 116.3° | 122.5° |
| C3' | N3' | C8' | HN3' | 180.0° | 180.0° |
| C3' | N3' | C8' | O8' | 4.8° | 0.0° |
| C3' | N3' | C8' | C9' | 173.2° | 180.0° |
| N3' | C3' | C2' | H2'1 | 25.4° | 122.6° |
| N3' | C3' | C2' | H2'2 | 84.0° | 0.0° |
| C2' | C3' | N3' | C8' | 93.5° | 93.3° |
| C2' | C3' | N3' | HN3' | 86.6° | 86.7° |
| C3' | C2' | H2'1 | H2'2 | 119.7° | 122.6° |
| H3' | C3' | N3' | C8' | 27.2° | 29.3° |
| H3' | C3' | N3' | HN3' | 152.7° | 150.7° |
| H3' | C3' | C2' | H2'1 | 141.7° | 0.1° |
| H3' | C3' | C2' | H2'2 | 32.3° | 122.5° |
| N3' | C8' | O8' | C9' | 177.9° | 179.9° |
| N3' | C8' | C9' | H9'1 | 180.0° | 179.9° |
| N3' | C8' | C9' | H9'2 | 54.8° | 59.9° |
| N3' | C8' | C9' | H9'3 | 54.8° | 60.0° |
| HN3' | N3' | C8' | O8' | 175.2° | 179.9° |
| HN3' | N3' | C8' | C9' | 6.8° | 0.0° |
| O8' | C8' | C9' | H9'1 | 2.0° | 0.0° |
| O8' | C8' | C9' | H9'2 | 123.1° | 120.0° |
| O8' | C8' | C9' | H9'3 | 127.3° | 120.1° |
| C8' | C9' | H9'1 | H9'2 | 125.2° | 120.0° |
| C8' | C9' | H9'1 | H9'3 | 125.3° | 120.0° |
| C8' | C9' | H9'2 | H9'3 | 115.0° | 119.9° |
| H9'1 | C9' | H9'2 | H9'3 | 114.9° | 120.1° |
