Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

ADQ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
PBO1Bdoub1.48Å1.50Å
PBO2Bsing1.61Å1.64Å
PBO3Bsing1.61Å1.50Å
PBO3Asing1.61Å1.58Å
O2BHOB2sing0.97Å0.95Å
O3BC1'sing1.43Å1.47Å
PAO1Adoub1.48Å1.49Å
PAO2Asing1.61Å1.48Å
PAO3Asing1.61Å1.60Å
PAO5Dsing1.61Å1.62Å
O2AHOA2sing0.97Å0.95Å
O5DC5Dsing1.43Å1.44Å
C5DC4Dsing1.53Å1.53Å
C5DH5'1sing1.09Å1.12Å
C5DH5'2sing1.09Å1.11Å
C4DO4Dsing1.44Å1.43Å
C4DC3Dsing1.54Å1.51Å
C4DH4Dsing1.09Å1.12Å
O4DC1Dsing1.44Å1.44Å
C3DO3Dsing1.43Å1.42Å
C3DC2Dsing1.55Å1.53Å
C3DH3Dsing1.09Å1.12Å
O3DHO3'sing0.97Å0.95Å
C2DO2Dsing1.43Å1.44Å
C2DC1Dsing1.54Å1.52Å
C2DH2Dsing1.09Å1.11Å
O2DHO2'sing0.97Å0.95Å
C1DN9sing1.46Å1.51Å
C1DH1Dsing1.09Å1.11Å
N9C8sing1.36Å1.34ÅAromatic
N9C4sing1.37Å1.33ÅAromatic
C8N7doub1.30Å1.34ÅAromatic
C8H8sing1.08Å1.10Å
N7C5sing1.36Å1.31ÅAromatic
C5C6sing1.40Å1.40ÅAromatic
C5C4doub1.41Å1.41ÅAromatic
C6N6sing1.38Å1.34Å
C6N1doub1.33Å1.36ÅAromatic
N6HN61sing0.97Å1.02Å
N6HN62sing0.97Å1.02Å
N1C2sing1.32Å1.34ÅAromatic
C2N3doub1.32Å1.33ÅAromatic
C2H2sing1.08Å1.10Å
N3C4sing1.33Å1.35ÅAromatic
C1'C2'sing1.53Å1.56Å
C1'O5'sing1.43Å1.46Å
C1'H1'sing1.09Å1.12Å
C2'C3'sing1.53Å1.57Å
C2'O2'sing1.43Å1.47Å
C2'H2'sing1.09Å1.12Å
C3'C4'sing1.53Å1.57Å
C3'O3'sing1.43Å1.46Å
C3'H3'sing1.09Å1.11Å
C4'C5'sing1.53Å1.57Å
C4'O4'sing1.43Å1.46Å
C4'H4'sing1.09Å1.12Å
C5'C6'sing1.53Å1.56Å
C5'O5'sing1.43Å1.48Å
C5'H5'sing1.09Å1.11Å
C6'O6'sing1.43Å1.47Å
C6'H6'1sing1.09Å1.11Å
C6'H6'2sing1.09Å1.11Å
O2'HO2Asing0.97Å0.95Å
O3'HO3Asing0.97Å0.95Å
O4'HO4'sing0.97Å0.95Å
O6'HO6'sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1BPBO2B114.1°109.5°
O1BPBO3B110.7°109.5°
O1BPBO3A106.8°109.5°
O2BPBO3B108.3°109.4°
O2BPBO3A104.4°109.4°
PBO2BHOB2114.0°106.8°
O3BPBO3A112.6°109.5°
PBO3BC1'127.2°106.9°
PBO3APA136.6°106.9°
O3BC1'C2'112.9°109.5°
O3BC1'O5'110.0°109.4°
O3BC1'H1'106.4°109.4°
O1APAO2A110.2°109.5°
O1APAO3A109.4°109.5°
O1APAO5D114.5°109.5°
O2APAO3A111.1°109.4°
O2APAO5D110.7°109.5°
PAO2AHOA2110.2°106.8°
O3APAO5D100.6°109.5°
PAO5DC5D123.0°106.9°
O5DC5DC4D106.2°109.5°
O5DC5DH5'1113.4°109.5°
O5DC5DH5'2113.4°109.4°
C4DC5DH5'1113.4°109.5°
C4DC5DH5'2113.4°109.4°
C5DC4DO4D110.2°110.4°
C5DC4DC3D112.6°110.5°
C5DC4DH4D105.9°110.3°
H5'1C5DH5'297.1°109.5°
O4DC4DC3D106.3°104.8°
O4DC4DH4D112.2°110.4°
C4DO4DC1D110.0°105.2°
C3DC4DH4D109.8°110.4°
C4DC3DO3D111.2°110.5°
C4DC3DC2D107.3°104.1°
C4DC3DH3D110.2°110.5°
O4DC1DC2D107.2°104.9°
O4DC1DN9108.1°110.4°
O4DC1DH1D113.8°110.4°
O3DC3DC2D110.6°110.5°
O3DC3DH3D106.8°110.5°
C3DO3DHO3'111.2°106.8°
C2DC3DH3D110.8°110.6°
C3DC2DO2D111.9°110.5°
C3DC2DC1D104.3°104.0°
C3DC2DH2D113.0°110.5°
O2DC2DC1D114.0°110.8°
O2DC2DH2D103.1°110.4°
C2DO2DHO2'111.9°106.9°
C1DC2DH2D110.8°110.4°
C2DC1DN9114.7°110.4°
C2DC1DH1D107.1°110.4°
N9C1DH1D106.2°110.3°
C1DN9C8125.1°126.3°
C1DN9C4126.8°126.3°
C8N9C4107.6°107.5°
N9C8N7109.3°110.0°
N9C8H8125.2°125.0°
N9C4C5107.5°106.0°
N9C4N3133.7°135.0°
N7C8H8125.5°125.0°
C8N7C5108.9°109.4°
N7C5C6135.7°134.7°
N7C5C4106.7°107.1°
C6C5C4117.7°118.3°
C5C6N6120.7°120.8°
C5C6N1119.7°118.4°
C5C4N3118.8°119.0°
N6C6N1119.6°120.8°
C6N6HN61120.7°120.0°
C6N6HN62108.1°120.0°
C6N1C2121.5°121.2°
HN61N6HN62108.2°120.0°
N1C2N3119.5°122.5°
N1C2H2120.6°118.7°
N3C2H2119.9°118.8°
C2N3C4122.9°120.7°
C2'C1'O5'108.4°109.7°
C2'C1'H1'108.1°109.4°
C1'C2'C3'111.7°109.1°
C1'C2'O2'110.1°109.6°
C1'C2'H2'107.5°109.6°
O5'C1'H1'111.0°109.3°
C1'O5'C5'118.1°107.6°
C3'C2'O2'109.6°109.5°
C3'C2'H2'108.1°109.5°
C2'C3'C4'110.3°108.6°
C2'C3'O3'109.3°109.8°
C2'C3'H3'110.4°109.6°
O2'C2'H2'109.7°109.6°
C2'O2'HO2A110.1°106.8°
C4'C3'O3'113.3°109.6°
C4'C3'H3'106.3°109.6°
C3'C4'C5'110.0°109.0°
C3'C4'O4'118.5°109.6°
C3'C4'H4'101.3°109.5°
O3'C3'H3'107.2°109.6°
C3'O3'HO3A109.3°106.8°
C5'C4'O4'104.4°109.6°
C5'C4'H4'116.1°109.7°
C4'C5'C6'114.8°109.3°
C4'C5'O5'114.7°109.8°
C4'C5'H5'101.4°109.5°
O4'C4'H4'107.1°109.5°
C4'O4'HO4'118.5°106.8°
C6'C5'O5'108.7°109.4°
C6'C5'H5'108.3°109.4°
C5'C6'O6'112.1°109.4°
C5'C6'H6'1111.3°109.5°
C5'C6'H6'2111.3°109.5°
O5'C5'H5'108.4°109.4°
O6'C6'H6'1111.2°109.5°
O6'C6'H6'2111.2°109.4°
C6'O6'HO6'112.1°106.8°
H6'1C6'H6'299.1°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1BPBO2BO3B123.7°120.0°
O1BPBO2BO3A116.1°120.0°
O1BPBO3BO3A119.4°120.1°
O1BPBO2BHOB2180.0°180.0°
O1BPBO3BC1'45.4°59.9°
O1BPBO3APA160.7°60.0°
O2BPBO3BO3A114.8°120.0°
O2BPBO3BC1'171.1°60.0°
O2BPBO3APA39.6°60.0°
O3BPBO2BHOB256.3°60.0°
O3BPBO3APA77.6°180.0°
PBO3BC1'C2'129.8°149.8°
PBO3BC1'O5'108.9°89.8°
PBO3BC1'H1'11.5°29.9°
O3APBO2BHOB263.8°60.0°
O3APBO3BC1'74.0°180.0°
PBO3APAO1A14.9°59.9°
PBO3APAO2A107.0°60.0°
PBO3APAO5D135.8°180.0°
O3BC1'C2'O5'122.2°120.1°
O3BC1'C2'H1'117.4°119.9°
O3BC1'O5'H1'117.5°119.8°
O3BC1'C2'C3'65.3°58.8°
O3BC1'C2'O2'56.7°61.1°
O3BC1'C2'H2'176.3°178.7°
O3BC1'O5'C5'70.7°52.6°
O1APAO2AO3A121.4°120.0°
O1APAO2AO5D127.7°120.0°
O1APAO3AO5D120.9°120.0°
O1APAO2AHOA2179.9°180.0°
O1APAO5DC5D15.9°59.9°
O2APAO3AO5D117.2°120.0°
O2APAO5DC5D109.4°60.0°
O3APAO2AHOA258.5°60.0°
O3APAO5DC5D133.1°180.0°
O5DPAO2AHOA252.3°60.0°
PAO5DC5DC4D132.3°180.0°
PAO5DC5DH5'1102.4°59.9°
PAO5DC5DH5'27.1°60.0°
O5DC5DC4DH5'1125.2°120.1°
O5DC5DC4DH5'2125.2°119.9°
O5DC5DH5'1H5'2119.3°119.9°
O5DC5DC4DO4D168.5°61.4°
O5DC5DC4DC3D49.9°176.9°
O5DC5DC4DH4D70.0°60.9°
C4DC5DH5'1H5'2119.4°120.0°
C5DC4DO4DC3D122.3°119.0°
C5DC4DO4DH4D117.7°122.2°
C5DC4DC3DH4D117.6°122.2°
C5DC4DO4DC1D100.6°159.5°
C5DC4DC3DO3D130.3°98.3°
C5DC4DC3DC2D108.7°143.0°
C5DC4DC3DH3D12.0°24.2°
H5'1C5DC4DO4D66.3°178.6°
H5'1C5DC4DC3D175.1°63.1°
H5'1C5DC4DH4D55.2°59.2°
H5'2C5DC4DO4D43.2°58.5°
H5'2C5DC4DC3D75.3°56.9°
H5'2C5DC4DH4D164.8°179.2°
O4DC4DC3DH4D121.6°118.9°
O4DC4DC3DO3D108.9°142.8°
O4DC4DC3DC2D12.0°24.1°
O4DC4DC3DH3D132.8°94.7°
C4DO4DC1DC2D22.7°40.4°
C4DO4DC1DN9101.3°159.3°
C4DO4DC1DH1D140.9°78.5°
C3DC4DO4DC1D21.7°40.5°
C4DC3DO3DC2D119.0°114.7°
C4DC3DO3DH3D120.3°122.6°
C4DC3DC2DH3D120.4°118.7°
C4DC3DO3DHO3'180.0°179.9°
C4DC3DC2DO2D122.5°118.8°
C4DC3DC2DC1D1.2°0.1°
C4DC3DC2DH2D121.7°118.6°
H4DC4DO4DC1D141.7°78.3°
H4DC4DC3DO3D12.6°23.9°
H4DC4DC3DC2D133.6°94.8°
H4DC4DC3DH3D105.6°146.5°
O4DC1DC2DC3D14.0°23.8°
O4DC1DC2DO2D108.4°142.6°
O4DC1DC2DN9119.9°118.9°
O4DC1DC2DH1D122.5°118.9°
O4DC1DC2DH2D135.9°94.7°
O4DC1DN9H1D122.5°122.2°
O4DC1DN9C873.8°27.0°
O4DC1DN9C4115.2°153.0°
O3DC3DC2DH3D118.3°122.7°
O3DC3DC2DO2D1.2°0.2°
O3DC3DC2DC1D122.5°118.8°
O3DC3DC2DH2D117.0°122.7°
C2DC3DO3DHO3'61.0°65.4°
C3DC2DO2DC1D118.1°114.7°
C3DC2DO2DH2D121.7°122.6°
C3DC2DC1DH2D121.9°118.6°
C3DC2DO2DHO2'179.9°61.4°
C3DC2DC1DN9105.9°142.7°
C3DC2DC1DH1D136.5°95.1°
H3DC3DO3DHO3'59.7°57.4°
H3DC3DC2DO2D117.1°122.5°
H3DC3DC2DC1D119.2°118.5°
H3DC3DC2DH2D1.3°0.0°
O2DC2DC1DH2D115.7°122.7°
O2DC2DC1DN9131.7°98.5°
O2DC2DC1DH1D14.1°23.7°
C1DC2DO2DHO2'61.9°176.1°
C2DC1DN9H1D118.1°122.2°
C2DC1DN9C845.6°88.5°
C2DC1DN9C4125.4°91.5°
H2DC2DO2DHO2'58.3°61.2°
H2DC2DC1DN915.9°24.2°
H2DC2DC1DH1D101.6°146.3°
C1DN9C8C4172.5°180.0°
C1DN9C8N7172.2°180.0°
C1DN9C8H87.8°0.0°
C1DN9C4C5172.2°179.8°
C1DN9C4N38.3°0.1°
H1DC1DN9C8163.7°149.3°
H1DC1DN9C47.3°30.7°
N9C8N7H8180.0°180.0°
N9C8N7C50.4°0.2°
C8N9C4C50.1°0.2°
C8N9C4N3179.4°179.9°
C4N9C8N70.3°0.0°
C4N9C8H8179.7°180.0°
N9C4C5N70.1°0.3°
N9C4C5C6179.4°179.7°
N9C4C5N3179.6°179.9°
N9C4N3C2179.5°180.0°
C8N7C5C6179.1°179.5°
C8N7C5C40.3°0.4°
H8C8N7C5179.6°179.8°
N7C5C6C4179.3°179.1°
N7C5C6N60.2°0.6°
N7C5C6N1179.6°179.6°
N7C5C4N3179.7°179.8°
C5C6N6N1179.8°179.8°
C5C6N6HN61180.0°179.7°
C5C6N6HN6254.7°0.4°
C5C6N1C20.2°0.3°
C6C5C4N30.2°0.4°
C4C5C6N6179.5°179.7°
C4C5C6N10.3°0.5°
C5C4N3C20.1°0.1°
C6N6HN61HN62125.2°179.8°
N6C6N1C2179.7°179.9°
N1C6N6HN610.2°0.0°
N1C6N6HN62125.5°179.8°
C6N1C2N30.1°0.0°
C6N1C2H2179.9°180.0°
N1C2N3H2180.0°180.0°
N1C2N3C40.2°0.1°
H2C2N3C4179.8°180.0°
C2'C1'O5'H1'118.6°120.0°
C1'C2'C3'O2'122.3°119.9°
C1'C2'C3'H2'118.1°119.9°
C1'C2'O2'H2'118.2°120.3°
C1'C2'C3'C4'58.0°53.8°
C1'C2'C3'O3'176.8°173.6°
C1'C2'C3'H3'59.1°66.0°
C2'C1'O5'C5'53.2°67.6°
C1'C2'O2'HO2A179.9°60.4°
O5'C1'C2'C3'56.9°61.3°
O5'C1'C2'O2'178.9°178.8°
O5'C1'C2'H2'61.6°58.5°
C1'O5'C5'C4'49.6°67.6°
C1'O5'C5'C6'179.7°172.4°
C1'O5'C5'H5'62.9°52.6°
H1'C1'C2'C3'177.3°178.7°
H1'C1'C2'O2'60.7°58.8°
H1'C1'C2'H2'58.9°61.4°
H1'C1'O5'C5'171.8°172.4°
C3'C2'O2'H2'118.6°120.1°
C2'C3'C4'O3'122.9°119.9°
C2'C3'C4'H3'119.7°119.8°
C2'C3'O3'H3'119.7°120.5°
C2'C3'C4'C5'50.4°53.8°
C2'C3'C4'O4'170.3°173.6°
C2'C3'C4'H4'73.0°66.2°
C3'C2'O2'HO2A56.8°180.0°
C2'C3'O3'HO3A180.0°60.8°
O2'C2'C3'C4'179.7°173.7°
O2'C2'C3'O3'54.5°66.5°
O2'C2'C3'H3'63.2°53.9°
H2'C2'C3'C4'60.1°66.1°
H2'C2'C3'O3'65.0°53.7°
H2'C2'C3'H3'177.2°174.1°
H2'C2'O2'HO2A61.8°59.9°
C4'C3'O3'H3'116.9°120.3°
C3'C4'C5'O4'128.2°119.9°
C3'C4'C5'H4'114.2°119.8°
C3'C4'O4'H4'113.6°120.2°
C3'C4'C5'C6'172.7°178.7°
C3'C4'C5'O5'45.7°61.3°
C3'C4'C5'H5'70.8°58.9°
C4'C3'O3'HO3A56.6°179.9°
C3'C4'O4'HO4'180.0°60.4°
O3'C3'C4'C5'173.3°173.7°
O3'C3'C4'O4'66.8°66.4°
O3'C3'C4'H4'49.9°53.7°
H3'C3'C4'C5'69.3°66.0°
H3'C3'C4'O4'50.6°53.9°
H3'C3'C4'H4'167.4°174.0°
H3'C3'O3'HO3A60.3°59.6°
C5'C4'O4'H4'123.7°120.3°
C4'C5'C6'O5'130.0°120.3°
C4'C5'C6'H5'112.4°119.9°
C4'C5'O5'H5'112.4°120.2°
C4'C5'C6'O6'103.8°179.8°
C4'C5'C6'H6'1130.9°59.7°
C4'C5'C6'H6'221.4°60.3°
C5'C4'O4'HO4'57.2°179.9°
O4'C4'C5'C6'59.1°58.8°
O4'C4'C5'O5'173.9°178.8°
O4'C4'C5'H5'57.3°61.1°
H4'C4'C5'C6'58.6°61.5°
H4'C4'C5'O5'68.4°58.5°
H4'C4'C5'H5'175.0°178.7°
H4'C4'O4'HO4'66.4°59.8°
C6'C5'O5'H5'117.5°119.8°
C5'C6'O6'H6'1125.3°120.0°
C5'C6'O6'H6'2125.3°120.0°
C5'C6'H6'1H6'2117.2°120.0°
C5'C6'O6'HO6'180.0°180.0°
O5'C5'C6'O6'26.1°60.0°
O5'C5'C6'H6'199.1°180.0°
O5'C5'C6'H6'2151.4°60.0°
H5'C5'C6'O6'143.8°59.8°
H5'C5'C6'H6'118.5°60.2°
H5'C5'C6'H6'291.0°179.8°
O6'C6'H6'1H6'2117.1°120.0°
H6'1C6'O6'HO6'54.7°60.0°
H6'2C6'O6'HO6'54.7°60.0°

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon