ADC
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C5' | C4' | doub | 1.31Å | 1.37Å | |
C5' | C1' | sing | 1.51Å | 1.52Å | |
C5' | H5' | sing | 1.08Å | 1.10Å | |
C4' | C3' | sing | 1.51Å | 1.47Å | |
C4' | H4' | sing | 1.08Å | 1.10Å | |
C3' | O3' | sing | 1.43Å | 1.20Å | |
C3' | C2' | sing | 1.55Å | 1.52Å | |
C3' | H3' | sing | 1.09Å | 1.11Å | |
O3' | HO3 | sing | 0.97Å | 0.95Å | |
C2' | O2' | sing | 1.43Å | 1.41Å | |
C2' | C1' | sing | 1.55Å | 1.58Å | |
C2' | H2' | sing | 1.09Å | 1.12Å | |
O2' | HO2 | sing | 0.97Å | 0.95Å | |
C1' | N9 | sing | 1.46Å | 1.47Å | |
C1' | H1' | sing | 1.09Å | 1.12Å | |
N9 | C8 | sing | 1.36Å | 1.37Å | Aromatic |
N9 | C4 | sing | 1.37Å | 1.37Å | Aromatic |
C8 | N7 | doub | 1.30Å | 1.30Å | Aromatic |
C8 | H8 | sing | 1.08Å | 1.10Å | |
N7 | C5 | sing | 1.35Å | 1.38Å | Aromatic |
C5 | C6 | sing | 1.40Å | 1.42Å | Aromatic |
C5 | C4 | doub | 1.40Å | 1.44Å | Aromatic |
C6 | N6 | sing | 1.38Å | 1.35Å | |
C6 | N1 | doub | 1.33Å | 1.36Å | Aromatic |
N6 | HN61 | sing | 0.97Å | 1.02Å | |
N6 | HN62 | sing | 0.97Å | 1.02Å | |
N1 | C2 | sing | 1.32Å | 1.34Å | Aromatic |
C2 | N3 | doub | 1.32Å | 1.36Å | Aromatic |
C2 | H2 | sing | 1.08Å | 1.10Å | |
N3 | C4 | sing | 1.33Å | 1.38Å | Aromatic |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C4' | C5' | C1' | 112.5° | 111.1° |
C4' | C5' | H5' | 119.5° | 124.4° |
C5' | C4' | C3' | 110.7° | 111.1° |
C5' | C4' | H4' | 121.7° | 124.5° |
C1' | C5' | H5' | 128.1° | 124.5° |
C5' | C1' | C2' | 101.2° | 104.8° |
C5' | C1' | N9 | 120.6° | 110.4° |
C5' | C1' | H1' | 114.9° | 110.3° |
C3' | C4' | H4' | 127.6° | 124.5° |
C4' | C3' | O3' | 128.5° | 110.4° |
C4' | C3' | C2' | 106.0° | 104.8° |
C4' | C3' | H3' | 111.3° | 110.4° |
O3' | C3' | C2' | 124.2° | 110.6° |
O3' | C3' | H3' | 48.4° | 110.3° |
C3' | O3' | HO3 | 128.5° | 106.9° |
C2' | C3' | H3' | 125.4° | 110.3° |
C3' | C2' | O2' | 106.4° | 111.0° |
C3' | C2' | C1' | 105.4° | 101.4° |
C3' | C2' | H2' | 114.7° | 111.1° |
O2' | C2' | C1' | 111.4° | 111.2° |
O2' | C2' | H2' | 109.0° | 110.9° |
C2' | O2' | HO2 | 106.4° | 106.8° |
C1' | C2' | H2' | 109.9° | 111.0° |
C2' | C1' | N9 | 123.3° | 110.4° |
C2' | C1' | H1' | 111.4° | 110.4° |
N9 | C1' | H1' | 85.1° | 110.3° |
C1' | N9 | C8 | 127.4° | 126.2° |
C1' | N9 | C4 | 125.9° | 126.3° |
C8 | N9 | C4 | 106.6° | 107.5° |
N9 | C8 | N7 | 113.2° | 110.0° |
N9 | C8 | H8 | 125.5° | 125.1° |
N9 | C4 | C5 | 105.8° | 106.1° |
N9 | C4 | N3 | 129.6° | 134.9° |
N7 | C8 | H8 | 121.3° | 124.9° |
C8 | N7 | C5 | 106.7° | 109.5° |
N7 | C5 | C6 | 134.3° | 134.7° |
N7 | C5 | C4 | 107.7° | 107.1° |
C6 | C5 | C4 | 117.9° | 118.2° |
C5 | C6 | N6 | 122.3° | 120.8° |
C5 | C6 | N1 | 116.7° | 118.5° |
C5 | C4 | N3 | 124.6° | 119.0° |
N6 | C6 | N1 | 121.0° | 120.8° |
C6 | N6 | HN61 | 122.3° | 120.0° |
C6 | N6 | HN62 | 107.7° | 120.0° |
C6 | N1 | C2 | 121.1° | 121.2° |
HN61 | N6 | HN62 | 107.6° | 120.0° |
N1 | C2 | N3 | 128.4° | 122.5° |
N1 | C2 | H2 | 114.8° | 118.7° |
N3 | C2 | H2 | 116.8° | 118.8° |
C2 | N3 | C4 | 111.3° | 120.6° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C4' | C5' | C1' | H5' | 180.0° | 179.9° |
C5' | C4' | C3' | H4' | 180.0° | 180.0° |
C5' | C4' | C3' | O3' | 179.9° | 135.4° |
C5' | C4' | C3' | C2' | 12.6° | 16.4° |
C5' | C4' | C3' | H3' | 126.7° | 102.4° |
C4' | C5' | C1' | C2' | 12.4° | 16.3° |
C4' | C5' | C1' | N9 | 152.6° | 135.3° |
C4' | C5' | C1' | H1' | 107.8° | 102.5° |
C1' | C5' | C4' | C3' | 0.4° | 0.1° |
C1' | C5' | C4' | H4' | 179.7° | 179.9° |
C5' | C1' | C2' | C3' | 19.1° | 24.5° |
C5' | C1' | C2' | O2' | 134.1° | 142.5° |
C5' | C1' | C2' | N9 | 138.8° | 118.9° |
C5' | C1' | C2' | H1' | 122.7° | 118.8° |
C5' | C1' | C2' | H2' | 105.0° | 93.6° |
C5' | C1' | N9 | H1' | 116.2° | 122.2° |
C5' | C1' | N9 | C8 | 62.4° | 57.0° |
C5' | C1' | N9 | C4 | 119.0° | 122.9° |
H5' | C5' | C4' | C3' | 179.6° | 180.0° |
H5' | C5' | C4' | H4' | 0.3° | 0.0° |
H5' | C5' | C1' | C2' | 167.6° | 163.6° |
H5' | C5' | C1' | N9 | 27.4° | 44.6° |
H5' | C5' | C1' | H1' | 72.2° | 77.6° |
C4' | C3' | O3' | C2' | 165.4° | 115.5° |
C4' | C3' | O3' | H3' | 85.1° | 122.2° |
C4' | C3' | C2' | H3' | 131.9° | 118.8° |
C4' | C3' | O3' | HO3 | 180.0° | 61.4° |
C4' | C3' | C2' | O2' | 138.1° | 142.7° |
C4' | C3' | C2' | C1' | 19.7° | 24.5° |
C4' | C3' | C2' | H2' | 101.3° | 93.5° |
H4' | C4' | C3' | O3' | 0.2° | 44.5° |
H4' | C4' | C3' | C2' | 167.4° | 163.6° |
H4' | C4' | C3' | H3' | 53.3° | 77.6° |
O3' | C3' | C2' | H3' | 59.9° | 122.2° |
O3' | C3' | C2' | O2' | 53.7° | 98.4° |
O3' | C3' | C2' | C1' | 172.1° | 143.4° |
O3' | C3' | C2' | H2' | 66.9° | 25.5° |
C2' | C3' | O3' | HO3 | 14.6° | 176.8° |
C3' | C2' | O2' | C1' | 114.4° | 112.1° |
C3' | C2' | O2' | H2' | 124.2° | 124.0° |
C3' | C2' | C1' | H2' | 124.1° | 118.1° |
C3' | C2' | O2' | HO2 | 180.0° | 61.4° |
C3' | C2' | C1' | N9 | 157.9° | 143.4° |
C3' | C2' | C1' | H1' | 103.6° | 94.3° |
H3' | C3' | O3' | HO3 | 94.9° | 60.9° |
H3' | C3' | C2' | O2' | 6.2° | 23.9° |
H3' | C3' | C2' | C1' | 112.2° | 94.3° |
H3' | C3' | C2' | H2' | 126.8° | 147.7° |
O2' | C2' | C1' | H2' | 120.9° | 123.9° |
O2' | C2' | C1' | N9 | 87.1° | 98.5° |
O2' | C2' | C1' | H1' | 11.4° | 23.7° |
C1' | C2' | O2' | HO2 | 65.6° | 173.5° |
C2' | C1' | N9 | H1' | 112.5° | 122.3° |
C2' | C1' | N9 | C8 | 69.0° | 58.4° |
C2' | C1' | N9 | C4 | 109.6° | 121.6° |
H2' | C2' | O2' | HO2 | 55.8° | 62.6° |
H2' | C2' | C1' | N9 | 33.8° | 25.4° |
H2' | C2' | C1' | H1' | 132.3° | 147.6° |
C1' | N9 | C8 | C4 | 178.8° | 180.0° |
C1' | N9 | C8 | N7 | 178.8° | 180.0° |
C1' | N9 | C8 | H8 | 1.2° | 0.0° |
C1' | N9 | C4 | C5 | 178.7° | 179.8° |
C1' | N9 | C4 | N3 | 1.1° | 0.1° |
H1' | C1' | N9 | C8 | 178.6° | 179.3° |
H1' | C1' | N9 | C4 | 2.9° | 0.7° |
N9 | C8 | N7 | H8 | 180.0° | 179.9° |
N9 | C8 | N7 | C5 | 0.1° | 0.2° |
C8 | N9 | C4 | C5 | 0.1° | 0.2° |
C8 | N9 | C4 | N3 | 179.9° | 179.9° |
C4 | N9 | C8 | N7 | 0.0° | 0.0° |
C4 | N9 | C8 | H8 | 180.0° | 180.0° |
N9 | C4 | C5 | N7 | 0.2° | 0.4° |
N9 | C4 | C5 | C6 | 179.9° | 179.6° |
N9 | C4 | C5 | N3 | 179.8° | 179.9° |
N9 | C4 | N3 | C2 | 179.6° | 180.0° |
C8 | N7 | C5 | C6 | 179.9° | 179.4° |
C8 | N7 | C5 | C4 | 0.2° | 0.3° |
H8 | C8 | N7 | C5 | 179.9° | 179.7° |
N7 | C5 | C6 | C4 | 179.9° | 179.0° |
N7 | C5 | C6 | N6 | 0.1° | 0.8° |
N7 | C5 | C6 | N1 | 179.9° | 179.6° |
N7 | C5 | C4 | N3 | 180.0° | 179.8° |
C5 | C6 | N6 | N1 | 179.8° | 179.6° |
C5 | C6 | N6 | HN61 | 180.0° | 179.7° |
C5 | C6 | N6 | HN62 | 54.7° | 0.6° |
C5 | C6 | N1 | C2 | 0.2° | 0.4° |
C6 | C5 | C4 | N3 | 0.1° | 0.5° |
C4 | C5 | C6 | N6 | 180.0° | 179.8° |
C4 | C5 | C6 | N1 | 0.2° | 0.6° |
C5 | C4 | N3 | C2 | 0.1° | 0.2° |
C6 | N6 | HN61 | HN62 | 125.3° | 179.6° |
N6 | C6 | N1 | C2 | 180.0° | 180.0° |
N1 | C6 | N6 | HN61 | 0.2° | 0.1° |
N1 | C6 | N6 | HN62 | 125.0° | 179.8° |
C6 | N1 | C2 | N3 | 0.0° | 0.0° |
C6 | N1 | C2 | H2 | 180.0° | 180.0° |
N1 | C2 | N3 | H2 | 180.0° | 180.0° |
N1 | C2 | N3 | C4 | 0.1° | 0.0° |
H2 | C2 | N3 | C4 | 179.9° | 180.0° |