Obsolete: AB5
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.48Å | |
N | H0A | sing | 1.01Å | 0.89Å | |
N | H0B | sing | 1.01Å | 0.89Å | |
N | H0C | sing | 1.01Å | 0.89Å | |
CA | C | sing | 1.51Å | 1.59Å | |
CA | CB | sing | 1.53Å | 1.56Å | |
CA | HA | sing | 1.09Å | 0.98Å | |
C | O | sing | 1.34Å | 1.17Å | |
C | OT | doub | 1.21Å | 1.36Å | |
O | H4 | sing | 0.97Å | 0.95Å | |
CB | CG | sing | 1.53Å | 1.51Å | |
CB | HB1 | sing | 1.09Å | 0.97Å | |
CB | HB2 | sing | 1.09Å | 0.97Å | |
CG | CD | sing | 1.53Å | 1.49Å | |
CG | HG1 | sing | 1.09Å | 0.97Å | |
CG | HG2 | sing | 1.09Å | 0.97Å | |
CD | CE | sing | 1.53Å | 1.52Å | |
CD | HD1 | sing | 1.09Å | 0.97Å | |
CD | HD2 | sing | 1.09Å | 0.97Å | |
CE | B | sing | 1.60Å | 1.56Å | |
CE | HE1 | sing | 1.09Å | 0.97Å | |
CE | HE2 | sing | 1.09Å | 0.97Å | |
B | O2 | sing | 1.37Å | 1.43Å | |
B | O1 | sing | 1.37Å | 1.45Å | |
B | O3 | sing | 1.37Å | 1.44Å | |
O2 | H2 | sing | 0.97Å | 0.86Å | |
O1 | H1 | sing | 0.97Å | 0.83Å | |
O3 | H3 | sing | 0.97Å | 0.82Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H0A | 109.4° | 109.5° |
CA | N | H0B | 109.4° | 109.4° |
CA | N | H0C | 109.5° | 109.5° |
N | CA | C | 112.4° | 109.4° |
N | CA | CB | 109.2° | 109.5° |
N | CA | HA | 108.5° | 109.5° |
H0A | N | H0B | 109.5° | 109.4° |
H0A | N | H0C | 109.5° | 109.5° |
H0B | N | H0C | 109.4° | 109.5° |
C | CA | CB | 109.5° | 109.4° |
C | CA | HA | 108.6° | 109.5° |
CA | C | O | 126.4° | 120.0° |
CA | C | OT | 112.4° | 120.0° |
CB | CA | HA | 108.6° | 109.5° |
CA | CB | CG | 115.0° | 109.4° |
CA | CB | HB1 | 108.5° | 109.5° |
CA | CB | HB2 | 108.5° | 109.5° |
O | C | OT | 120.7° | 120.0° |
C | O | H4 | 126.4° | 120.0° |
CG | CB | HB1 | 108.5° | 109.5° |
CG | CB | HB2 | 108.5° | 109.4° |
CB | CG | CD | 116.8° | 109.5° |
CB | CG | HG1 | 108.1° | 109.5° |
CB | CG | HG2 | 108.1° | 109.5° |
HB1 | CB | HB2 | 107.6° | 109.5° |
CD | CG | HG1 | 108.1° | 109.5° |
CD | CG | HG2 | 108.1° | 109.5° |
CG | CD | CE | 114.0° | 109.5° |
CG | CD | HD1 | 108.8° | 109.5° |
CG | CD | HD2 | 108.7° | 109.5° |
HG1 | CG | HG2 | 107.3° | 109.4° |
CE | CD | HD1 | 108.7° | 109.5° |
CE | CD | HD2 | 108.8° | 109.4° |
CD | CE | B | 120.4° | 109.5° |
CD | CE | HE1 | 107.2° | 109.4° |
CD | CE | HE2 | 107.2° | 109.5° |
HD1 | CD | HD2 | 107.7° | 109.5° |
B | CE | HE1 | 107.2° | 109.5° |
B | CE | HE2 | 107.2° | 109.5° |
CE | B | O2 | 116.3° | 109.5° |
CE | B | O1 | 111.6° | 109.5° |
CE | B | O3 | 112.5° | 109.4° |
HE1 | CE | HE2 | 106.9° | 109.5° |
O2 | B | O1 | 100.2° | 109.5° |
O2 | B | O3 | 111.0° | 109.5° |
B | O2 | H2 | 115.0° | 106.8° |
O1 | B | O3 | 103.9° | 109.4° |
B | O1 | H1 | 107.5° | 106.8° |
B | O3 | H3 | 112.9° | 106.8° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H0A | H0B | 120.0° | 119.9° |
CA | N | H0A | H0C | 120.0° | 120.0° |
CA | N | H0B | H0C | 120.0° | 120.0° |
N | CA | C | CB | 121.6° | 120.0° |
N | CA | C | HA | 120.1° | 120.0° |
N | CA | CB | HA | 118.2° | 120.1° |
N | CA | C | O | 175.8° | 160.0° |
N | CA | C | OT | 3.8° | 20.0° |
N | CA | CB | CG | 80.2° | 65.1° |
N | CA | CB | HB1 | 158.1° | 54.9° |
N | CA | CB | HB2 | 41.5° | 175.0° |
H0A | N | H0B | H0C | 120.1° | 120.0° |
H0A | N | CA | C | 58.3° | 60.0° |
H0A | N | CA | CB | 180.0° | 180.0° |
H0A | N | CA | HA | 61.8° | 60.0° |
H0B | N | CA | C | 178.3° | 180.0° |
H0B | N | CA | CB | 60.0° | 60.1° |
H0B | N | CA | HA | 58.2° | 60.0° |
H0C | N | CA | C | 61.8° | 60.0° |
H0C | N | CA | CB | 60.0° | 59.9° |
H0C | N | CA | HA | 178.1° | 180.0° |
C | CA | CB | HA | 118.3° | 120.0° |
CA | C | O | OT | 171.4° | 180.0° |
CA | C | O | H4 | 180.0° | 180.0° |
C | CA | CB | CG | 43.3° | 175.0° |
C | CA | CB | HB1 | 78.4° | 65.0° |
C | CA | CB | HB2 | 165.0° | 55.0° |
CB | CA | C | O | 62.6° | 80.0° |
CB | CA | C | OT | 125.4° | 100.0° |
CA | CB | CG | HB1 | 121.7° | 120.0° |
CA | CB | CG | HB2 | 121.7° | 120.0° |
CA | CB | HB1 | HB2 | 117.2° | 120.0° |
CA | CB | CG | CD | 167.3° | 180.0° |
CA | CB | CG | HG1 | 45.2° | 59.9° |
CA | CB | CG | HG2 | 70.6° | 60.0° |
HA | CA | C | O | 55.8° | 40.0° |
HA | CA | C | OT | 116.2° | 140.0° |
HA | CA | CB | CG | 161.7° | 55.0° |
HA | CA | CB | HB1 | 40.0° | 175.0° |
HA | CA | CB | HB2 | 76.6° | 64.9° |
OT | C | O | H4 | 8.6° | 0.1° |
CG | CB | HB1 | HB2 | 117.2° | 120.0° |
CB | CG | CD | HG1 | 122.1° | 120.0° |
CB | CG | CD | HG2 | 122.1° | 120.0° |
CB | CG | HG1 | HG2 | 116.4° | 119.9° |
CB | CG | CD | CE | 174.5° | 180.0° |
CB | CG | CD | HD1 | 53.0° | 60.0° |
CB | CG | CD | HD2 | 64.0° | 60.0° |
HB1 | CB | CG | CD | 71.0° | 60.0° |
HB1 | CB | CG | HG1 | 166.9° | 179.9° |
HB1 | CB | CG | HG2 | 51.1° | 60.0° |
HB2 | CB | CG | CD | 45.6° | 60.0° |
HB2 | CB | CG | HG1 | 76.5° | 60.0° |
HB2 | CB | CG | HG2 | 167.7° | 179.9° |
CD | CG | HG1 | HG2 | 116.4° | 120.0° |
CG | CD | CE | HD1 | 121.5° | 120.0° |
CG | CD | CE | HD2 | 121.5° | 120.0° |
CG | CD | HD1 | HD2 | 117.6° | 120.0° |
CG | CD | CE | B | 166.8° | 180.0° |
CG | CD | CE | HE1 | 70.5° | 60.0° |
CG | CD | CE | HE2 | 44.0° | 60.0° |
HG1 | CG | CD | CE | 52.4° | 60.0° |
HG1 | CG | CD | HD1 | 69.1° | 180.0° |
HG1 | CG | CD | HD2 | 173.9° | 60.0° |
HG2 | CG | CD | CE | 63.4° | 60.0° |
HG2 | CG | CD | HD1 | 175.1° | 60.1° |
HG2 | CG | CD | HD2 | 58.1° | 180.0° |
CE | CD | HD1 | HD2 | 117.7° | 120.0° |
CD | CE | B | HE1 | 122.8° | 120.0° |
CD | CE | B | HE2 | 122.8° | 120.0° |
CD | CE | HE1 | HE2 | 114.7° | 120.0° |
CD | CE | B | O2 | 179.0° | 60.0° |
CD | CE | B | O1 | 67.0° | 180.0° |
CD | CE | B | O3 | 49.4° | 60.0° |
HD1 | CD | CE | B | 45.3° | 60.0° |
HD1 | CD | CE | HE1 | 168.0° | 180.0° |
HD1 | CD | CE | HE2 | 77.5° | 60.1° |
HD2 | CD | CE | B | 71.7° | 60.0° |
HD2 | CD | CE | HE1 | 51.0° | 60.0° |
HD2 | CD | CE | HE2 | 165.5° | 180.0° |
B | CE | HE1 | HE2 | 114.7° | 120.1° |
CE | B | O2 | O1 | 120.4° | 120.0° |
CE | B | O2 | O3 | 130.3° | 120.0° |
CE | B | O1 | O3 | 121.4° | 119.9° |
CE | B | O2 | H2 | 18.4° | 60.0° |
CE | B | O1 | H1 | 42.4° | 59.9° |
CE | B | O3 | H3 | 37.6° | 180.0° |
HE1 | CE | B | O2 | 56.2° | 59.9° |
HE1 | CE | B | O1 | 170.2° | 60.1° |
HE1 | CE | B | O3 | 73.4° | 180.0° |
HE2 | CE | B | O2 | 58.3° | 180.0° |
HE2 | CE | B | O1 | 55.8° | 59.9° |
HE2 | CE | B | O3 | 172.1° | 60.0° |
O2 | B | O1 | O3 | 114.8° | 120.1° |
O2 | B | O1 | H1 | 81.3° | 180.0° |
O2 | B | O3 | H3 | 94.7° | 60.0° |
O1 | B | O2 | H2 | 102.0° | 180.0° |
O1 | B | O3 | H3 | 158.4° | 60.0° |
O3 | B | O2 | H2 | 148.6° | 60.0° |
O3 | B | O1 | H1 | 163.9° | 60.0° |