Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

AAV

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1N2sing1.47Å1.46Å
N2C3sing1.47Å1.50Å
N2C7sing1.47Å1.49Å
C3C4sing1.53Å1.54Å
C4N5sing1.47Å1.49Å
N5C6sing1.47Å1.48Å
N5C8sing1.40Å1.41Å
C6C7sing1.53Å1.54Å
C8C9doub1.40Å1.41ÅAromatic
C8C31sing1.38Å1.40ÅAromatic
C9C10sing1.37Å1.37ÅAromatic
C10C11doub1.40Å1.40ÅAromatic
C11N12sing1.36Å1.37Å
C11C32sing1.41Å1.43ÅAromatic
N12C13doub1.30Å1.31Å
C13N14sing1.36Å1.37Å
N14C15sing1.40Å1.40Å
N14C30sing1.35Å1.37Å
C15C16doub1.39Å1.40ÅAromatic
C15C28sing1.39Å1.40ÅAromatic
C16C17sing1.40Å1.40ÅAromatic
C17C19sing1.48Å1.50Å
C17C26doub1.40Å1.40ÅAromatic
N18C19sing1.35Å1.33Å
N18C25sing1.39Å1.41Å
C19O20doub1.22Å1.23Å
C22C23doub1.35Å1.36ÅAromatic
C22C25sing1.42Å1.42ÅAromatic
C23O24sing1.34Å1.35ÅAromatic
O24N29sing1.21Å1.22ÅAromatic
C25N29doub1.31Å1.33ÅAromatic
C26C27sing1.38Å1.38ÅAromatic
C27C28doub1.38Å1.37ÅAromatic
C28C29sing1.51Å1.52Å
C30O31doub1.22Å1.22Å
C30C32sing1.47Å1.48Å
C31C32doub1.39Å1.39ÅAromatic
C1H1sing1.09Å1.10Å
C1H1Asing1.09Å1.10Å
C1H1Bsing1.09Å1.10Å
C3H3sing1.09Å1.10Å
C3H3Asing1.09Å1.10Å
C4H4sing1.09Å1.10Å
C4H4Asing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C6H6Asing1.09Å1.10Å
C7H7sing1.09Å1.10Å
C7H7Asing1.09Å1.10Å
C9H9sing1.08Å1.08Å
C10H10sing1.08Å1.08Å
C13H13sing1.08Å1.08Å
C16H16sing1.08Å1.08Å
C22H22sing1.08Å1.08Å
C23H23sing1.08Å1.08Å
C26H26sing1.08Å1.08Å
C27H27sing1.08Å1.08Å
C29H281sing1.09Å1.10Å
C29H282sing1.09Å1.10Å
C29H283sing1.09Å1.10Å
C31H31sing1.08Å1.08Å
N18H18sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1N2C3108.0°111.0°
C1N2C7109.7°111.0°
N2C1H1109.5°109.4°
N2C1H1A109.5°109.5°
N2C1H1B109.5°109.4°
C3N2C7111.9°110.9°
N2C3C4109.7°109.4°
N2C3H3109.4°109.5°
N2C3H3A109.4°109.5°
N2C7C6109.6°109.3°
N2C7H7109.4°109.5°
N2C7H7A109.4°109.5°
C3C4N5112.2°109.4°
C4C3H3109.4°109.5°
C4C3H3A109.4°109.5°
C3C4H4108.8°109.5°
C3C4H4A108.8°109.5°
C4N5C6111.5°110.8°
C4N5C8109.6°111.0°
N5C4H4108.8°109.6°
N5C4H4A108.8°109.5°
C6N5C8112.3°111.0°
N5C6C7106.8°109.4°
N5C6H6110.1°109.5°
N5C6H6A110.1°109.5°
N5C8C9118.9°119.8°
N5C8C31121.1°119.8°
C7C6H6110.1°109.5°
C7C6H6A110.1°109.4°
C6C7H7109.5°109.5°
C6C7H7A109.5°109.5°
C9C8C31120.0°120.4°
C8C9C10122.5°120.9°
C8C9H9118.7°119.6°
C8C31C32118.2°119.3°
C8C31H31120.9°120.4°
C9C10C11117.9°119.9°
C10C9H9118.8°119.5°
C9C10H10121.0°120.1°
C10C11N12120.3°121.6°
C10C11C32120.3°119.5°
C11C10H10121.0°120.0°
N12C11C32119.4°118.9°
C11N12C13122.2°121.7°
C11C32C30117.4°118.1°
C11C32C31121.1°120.1°
N12C13N14122.0°123.3°
N12C13H13119.0°118.3°
C13N14C15120.0°119.7°
C13N14C30121.6°120.6°
N14C13H13119.0°118.4°
C15N14C30118.4°119.7°
N14C15C16121.3°120.0°
N14C15C28116.6°120.0°
N14C30O31121.3°121.3°
N14C30C32117.4°117.4°
C16C15C28122.0°120.0°
C15C16C17119.2°119.8°
C15C16H16120.4°120.1°
C15C28C27118.8°120.2°
C15C28C29123.6°119.9°
C16C17C19126.2°120.1°
C16C17C26117.2°119.8°
C17C16H16120.4°120.2°
C19C17C26116.6°120.2°
C17C19N18117.2°120.0°
C17C19O20126.2°120.0°
C17C26C27123.5°120.0°
C17C26H26118.3°119.9°
C19N18C25119.8°120.0°
N18C19O20116.5°120.0°
C19N18H18120.1°120.0°
N18C25C22127.0°126.9°
N18C25N29126.6°126.9°
C25N18H18120.1°120.0°
C23C22C25103.9°104.0°
C22C23O24107.5°106.6°
C23C22H22128.1°128.1°
C22C23H23126.3°126.7°
C22C25N29106.3°106.2°
C25C22H22128.1°128.0°
C23O24N29111.0°111.7°
O24C23H23126.2°126.7°
O24N29C25111.3°111.5°
C26C27C28119.3°120.3°
C27C26H26118.3°120.1°
C26C27H27120.3°119.9°
C27C28C29117.6°119.9°
C28C27H27120.3°119.9°
C28C29H281109.5°109.5°
C28C29H282109.5°109.5°
C28C29H283109.5°109.4°
O31C30C32121.3°121.3°
C30C32C31121.5°121.9°
C32C31H31120.9°120.4°
H1C1H1A109.5°109.5°
H1C1H1B109.5°109.5°
H1AC1H1B109.4°109.5°
H3C3H3A109.5°109.5°
H4C4H4A109.5°109.5°
H6C6H6A109.5°109.5°
H7C7H7A109.5°109.5°
H281C29H282109.4°109.5°
H281C29H283109.5°109.5°
H282C29H283109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1N2C3C7120.8°123.9°
C1N2C3C4174.2°176.8°
C1N2C7C6179.7°176.8°
N2C1H1H1A120.0°120.0°
N2C1H1H1B120.0°120.0°
N2C1H1AH1B120.0°120.0°
C1N2C3H365.8°56.8°
C1N2C3H3A54.2°63.2°
C1N2C7H760.3°63.3°
C1N2C7H7A59.6°56.8°
N2C3C4H3120.0°120.0°
N2C3C4H3A120.0°120.0°
N2C3C4N551.0°58.4°
C3N2C7C660.6°59.3°
C3N2C1H1180.0°60.0°
C3N2C1H1A60.0°180.0°
C3N2C1H1B60.0°60.0°
N2C3H3H3A119.9°120.1°
N2C3C4H469.4°61.6°
N2C3C4H4A171.4°178.4°
C3N2C7H759.4°60.6°
C3N2C7H7A179.4°179.3°
C7N2C3C453.5°59.3°
N2C7C6N562.8°58.4°
N2C7C6H7120.0°119.9°
N2C7C6H7A120.0°120.0°
C7N2C1H157.9°176.2°
C7N2C1H1A62.1°56.2°
C7N2C1H1B177.9°63.8°
C7N2C3H3173.5°179.3°
C7N2C3H3A66.6°60.6°
N2C7C6H656.8°61.6°
N2C7C6H6A177.6°178.3°
N2C7H7H7A119.9°120.1°
C3C4N5H4120.4°120.0°
C3C4N5H4A120.4°119.9°
C3C4N5C657.1°59.4°
C3C4N5C8177.8°176.8°
C4C3H3H3A119.9°120.0°
C3C4H4H4A118.7°120.0°
C4N5C6C8123.5°123.8°
C4N5C6C761.3°59.4°
C4N5C8C942.2°0.0°
C4N5C8C31139.2°179.7°
N5C4C3H3171.0°178.4°
N5C4C3H3A69.0°61.5°
N5C4H4H4A118.7°120.1°
C4N5C6H658.3°60.6°
C4N5C6H6A179.1°179.3°
N5C6C7H6119.6°120.0°
N5C6C7H6A119.6°119.9°
C6N5C8C9166.7°123.8°
C6N5C8C3114.7°56.5°
C6N5C4H463.3°60.6°
C6N5C4H4A177.5°179.3°
N5C6H6H6A121.2°120.1°
N5C6C7H757.2°61.5°
N5C6C7H7A177.2°178.4°
C8N5C6C7175.2°176.8°
N5C8C9C31178.6°179.7°
N5C8C9C10178.6°180.0°
N5C8C31C32179.7°179.7°
C8N5C4H461.8°63.2°
C8N5C4H4A57.4°56.9°
C8N5C6H665.2°63.2°
C8N5C6H6A55.6°56.9°
N5C8C9H91.4°0.1°
N5C8C31H310.3°0.0°
C7C6H6H6A121.2°120.0°
C6C7H7H7A120.0°120.1°
C8C9C10H9180.0°179.9°
C8C9C10C111.0°0.0°
C9C8C31C321.1°0.6°
C8C9C10H10179.0°180.0°
C9C8C31H31178.9°179.7°
C31C8C9C100.0°0.3°
C8C31C32C111.3°0.6°
C8C31C32C30178.8°179.7°
C8C31C32H31180.0°179.7°
C31C8C9H9180.0°179.6°
C9C10C11H10180.0°180.0°
C9C10C11N12179.7°179.9°
C9C10C11C320.8°0.1°
C10C11N12C32178.9°179.9°
C10C11N12C13175.5°179.9°
C10C11C32C30177.9°180.0°
C10C11C32C310.3°0.4°
C11C10C9H9179.0°179.9°
C11N12C13N142.9°0.0°
N12C11C32C301.0°0.1°
N12C11C32C31178.6°179.8°
N12C11C10H100.2°0.1°
C11N12C13H13177.1°180.0°
C32C11N12C133.5°0.1°
C11C32C30N141.9°0.1°
C11C32C30O31179.4°180.0°
C11C32C30C31177.6°179.6°
C32C11C10H10179.2°180.0°
C11C32C31H31178.7°179.7°
N12C13N14H13180.0°180.0°
N12C13N14C15179.9°180.0°
N12C13N14C300.4°0.1°
C13N14C15C30179.7°179.9°
C13N14C15C1698.1°89.9°
C13N14C15C2884.0°90.3°
C13N14C30O31179.8°180.0°
C13N14C30C322.6°0.1°
N14C15C16C28177.8°179.8°
N14C15C16C17179.4°180.0°
N14C15C28C27178.2°179.7°
N14C15C28C291.0°0.0°
C15N14C30O310.1°0.1°
C15N14C30C32177.6°180.0°
C15N14C13H130.0°0.0°
N14C15C16H160.6°0.1°
C30N14C15C1681.6°90.0°
C30N14C15C2896.3°89.8°
N14C30O31C32177.5°179.9°
N14C30C32C31175.7°179.8°
C30N14C13H13179.7°180.0°
C15C16C17H16180.0°179.9°
C15C16C17C19177.9°179.9°
C15C16C17C260.7°0.0°
C16C15C28C270.3°0.5°
C16C15C28C29178.9°179.8°
C28C15C16C171.6°0.2°
C15C28C27C262.0°0.5°
C15C28C27C29179.2°179.7°
C28C15C16H16178.4°179.8°
C15C28C27H27178.0°179.8°
C15C28C29H28189.6°90.0°
C15C28C29H282150.5°149.9°
C15C28C29H28330.5°30.0°
C16C17C19C26178.6°180.0°
C16C17C19N18164.8°180.0°
C16C17C19O2018.5°0.0°
C16C17C26C271.7°0.0°
C16C17C26H26178.3°180.0°
C17C19N18O20177.1°179.9°
C17C19N18C25177.9°180.0°
C19C17C26C27179.6°180.0°
C19C17C16H162.1°0.0°
C19C17C26H260.4°0.0°
C17C19N18H182.1°0.1°
C26C17C19N1816.7°0.0°
C26C17C19O20160.1°180.0°
C17C26C27H26180.0°180.0°
C17C26C27C283.1°0.3°
C26C17C16H16179.4°180.0°
C17C26C27H27176.9°180.0°
C19N18C25H18180.0°179.9°
C19N18C25C22150.0°0.0°
C19N18C25N2932.8°180.0°
C25N18C19O200.9°0.1°
N18C25C22C23178.3°180.0°
N18C25C22N29177.7°180.0°
N18C25N29O24177.9°180.0°
N18C25C22H221.8°0.3°
O20C19N18H18179.1°180.0°
C23C22C25H22180.0°179.7°
C22C23O24H23180.0°180.0°
C22C23O24N290.6°0.0°
C23C22C25N290.6°0.0°
C25C22C23O240.7°0.0°
C22C25N29O240.3°0.0°
C25C22C23H23179.3°180.0°
C22C25N18H1830.0°180.0°
C23O24N29C250.2°0.0°
O24C23C22H22179.3°179.7°
N29O24C23H23179.4°180.0°
N29C25C22H22179.4°179.8°
N29C25N18H18147.2°0.0°
C26C27C28H27180.0°179.7°
C26C27C28C29178.8°179.7°
C28C27C26H26176.9°179.7°
C27C28C29H28189.6°89.7°
C27C28C29H28230.4°30.3°
C27C28C29H283150.4°150.3°
C29C28C27H271.2°0.0°
C28C29H281H282120.0°120.0°
C28C29H281H283120.0°120.0°
C28C29H282H283120.0°119.9°
O31C30C32C311.9°0.3°
C30C32C31H311.2°0.1°
H1C1H1AH1B120.0°120.1°
H3C3C4H450.7°58.4°
H3C3C4H4A68.6°61.7°
H3AC3C4H4170.6°178.4°
H3AC3C4H4A51.4°58.4°
H6C6C7H7176.8°178.5°
H6C6C7H7A63.2°58.4°
H6AC6C7H762.4°58.4°
H6AC6C7H7A57.6°61.7°
H9C9C10H101.0°0.1°
H22C22C23H230.7°0.2°
H26C26C27H273.1°0.0°
H281C29H282H283120.0°120.1°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon