AAM
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C8A | N9A | doub | 1.30Å | 1.35Å | Aromatic |
| C8A | N7A | sing | 1.35Å | 1.35Å | Aromatic |
| C8A | H8A | sing | 1.08Å | 1.10Å | |
| N9A | C4A | sing | 1.35Å | 1.38Å | Aromatic |
| C4A | C5A | doub | 1.40Å | 1.39Å | Aromatic |
| C4A | N3A | sing | 1.34Å | 1.35Å | Aromatic |
| C5A | N7A | sing | 1.38Å | 1.41Å | Aromatic |
| C5A | C6A | sing | 1.40Å | 1.44Å | Aromatic |
| N7A | C1' | sing | 1.46Å | 1.53Å | |
| N3A | C2A | doub | 1.32Å | 1.35Å | Aromatic |
| C2A | N1A | sing | 1.32Å | 1.37Å | Aromatic |
| C2A | H2A | sing | 1.08Å | 1.10Å | |
| N1A | C6A | doub | 1.33Å | 1.36Å | Aromatic |
| C6A | N6A | sing | 1.39Å | 1.43Å | |
| N6A | HN61 | sing | 0.97Å | 1.02Å | |
| N6A | HN62 | sing | 0.97Å | 1.02Å | |
| P | O1P | doub | 1.48Å | 1.50Å | |
| P | O2P | sing | 1.61Å | 1.49Å | |
| P | O3P | sing | 1.61Å | 1.48Å | |
| P | O6' | sing | 1.61Å | 1.60Å | |
| O2P | HOP2 | sing | 0.97Å | 0.95Å | |
| O3P | HOP3 | sing | 0.97Å | 0.95Å | |
| O6' | C5' | sing | 1.43Å | 1.43Å | |
| C5' | C4' | sing | 1.53Å | 1.50Å | |
| C5' | H5'1 | sing | 1.09Å | 1.12Å | |
| C5' | H5'2 | sing | 1.09Å | 1.11Å | |
| C4' | O5' | sing | 1.44Å | 1.45Å | |
| C4' | C3' | sing | 1.55Å | 1.50Å | |
| C4' | H4' | sing | 1.09Å | 1.11Å | |
| O5' | C1' | sing | 1.43Å | 1.45Å | |
| C3' | O3' | sing | 1.43Å | 1.43Å | |
| C3' | C2' | sing | 1.55Å | 1.51Å | |
| C3' | H3' | sing | 1.09Å | 1.12Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | O2' | sing | 1.43Å | 1.44Å | |
| C2' | C1' | sing | 1.54Å | 1.53Å | |
| C2' | H2' | sing | 1.09Å | 1.12Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C1' | H1' | sing | 1.09Å | 1.11Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| N9A | C8A | N7A | 115.0° | 110.1° |
| N9A | C8A | H8A | 122.6° | 125.0° |
| C8A | N9A | C4A | 106.0° | 109.8° |
| N7A | C8A | H8A | 122.4° | 124.9° |
| C8A | N7A | C5A | 102.1° | 107.1° |
| C8A | N7A | C1' | 125.4° | 126.4° |
| N9A | C4A | C5A | 106.4° | 106.8° |
| N9A | C4A | N3A | 126.0° | 134.5° |
| C5A | C4A | N3A | 127.6° | 118.7° |
| C4A | C5A | N7A | 110.4° | 106.1° |
| C4A | C5A | C6A | 116.9° | 118.6° |
| C4A | N3A | C2A | 111.0° | 120.6° |
| N7A | C5A | C6A | 132.6° | 135.3° |
| C5A | N7A | C1' | 132.5° | 126.5° |
| C5A | C6A | N1A | 116.9° | 118.6° |
| C5A | C6A | N6A | 127.0° | 120.7° |
| N7A | C1' | O5' | 119.2° | 109.8° |
| N7A | C1' | C2' | 116.2° | 109.8° |
| N7A | C1' | H1' | 94.8° | 109.8° |
| N3A | C2A | N1A | 127.9° | 122.5° |
| N3A | C2A | H2A | 115.0° | 118.8° |
| N1A | C2A | H2A | 117.2° | 118.8° |
| C2A | N1A | C6A | 119.7° | 121.1° |
| N1A | C6A | N6A | 116.1° | 120.7° |
| C6A | N6A | HN61 | 127.0° | 120.0° |
| C6A | N6A | HN62 | 106.1° | 120.0° |
| HN61 | N6A | HN62 | 106.1° | 120.0° |
| O1P | P | O2P | 109.2° | 109.4° |
| O1P | P | O3P | 109.8° | 109.5° |
| O1P | P | O6' | 111.5° | 109.4° |
| O2P | P | O3P | 109.4° | 109.5° |
| O2P | P | O6' | 109.8° | 109.5° |
| P | O2P | HOP2 | 109.2° | 106.8° |
| O3P | P | O6' | 107.0° | 109.5° |
| P | O3P | HOP3 | 109.8° | 106.8° |
| P | O6' | C5' | 122.1° | 106.8° |
| O6' | C5' | C4' | 107.4° | 109.5° |
| O6' | C5' | H5'1 | 113.0° | 109.5° |
| O6' | C5' | H5'2 | 113.0° | 109.4° |
| C4' | C5' | H5'1 | 113.0° | 109.5° |
| C4' | C5' | H5'2 | 113.0° | 109.5° |
| C5' | C4' | O5' | 111.5° | 110.4° |
| C5' | C4' | C3' | 116.7° | 110.3° |
| C5' | C4' | H4' | 101.4° | 110.3° |
| H5'1 | C5' | H5'2 | 97.4° | 109.4° |
| O5' | C4' | C3' | 104.8° | 105.1° |
| O5' | C4' | H4' | 114.1° | 110.3° |
| C4' | O5' | C1' | 110.5° | 110.0° |
| C3' | C4' | H4' | 108.6° | 110.3° |
| C4' | C3' | O3' | 111.6° | 111.1° |
| C4' | C3' | C2' | 100.1° | 100.9° |
| C4' | C3' | H3' | 113.7° | 111.2° |
| O5' | C1' | C2' | 102.0° | 107.6° |
| O5' | C1' | H1' | 110.9° | 109.9° |
| O3' | C3' | C2' | 108.1° | 111.1° |
| O3' | C3' | H3' | 106.4° | 111.0° |
| C3' | O3' | HO3' | 111.6° | 106.8° |
| C2' | C3' | H3' | 116.8° | 111.1° |
| C3' | C2' | O2' | 103.4° | 110.9° |
| C3' | C2' | C1' | 102.6° | 102.2° |
| C3' | C2' | H2' | 118.6° | 110.8° |
| O2' | C2' | C1' | 112.9° | 111.0° |
| O2' | C2' | H2' | 109.2° | 110.7° |
| C2' | O2' | HO2' | 103.4° | 106.8° |
| C1' | C2' | H2' | 110.0° | 111.0° |
| C2' | C1' | H1' | 114.2° | 109.9° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N9A | C8A | N7A | H8A | 180.0° | 180.0° |
| C8A | N9A | C4A | C5A | 1.1° | 0.3° |
| C8A | N9A | C4A | N3A | 178.7° | 180.0° |
| N9A | C8A | N7A | C5A | 2.6° | 0.3° |
| N9A | C8A | N7A | C1' | 174.7° | 180.0° |
| N7A | C8A | N9A | C4A | 1.0° | 0.0° |
| C8A | N7A | C5A | C4A | 3.3° | 0.4° |
| C8A | N7A | C5A | C1' | 177.0° | 179.7° |
| C8A | N7A | C5A | C6A | 179.9° | 179.5° |
| C8A | N7A | C1' | O5' | 163.8° | 23.7° |
| C8A | N7A | C1' | C2' | 41.0° | 94.5° |
| C8A | N7A | C1' | H1' | 79.0° | 144.6° |
| H8A | C8A | N9A | C4A | 178.9° | 180.0° |
| H8A | C8A | N7A | C5A | 177.3° | 179.8° |
| H8A | C8A | N7A | C1' | 5.4° | 0.1° |
| N9A | C4A | C5A | N3A | 177.6° | 179.8° |
| N9A | C4A | C5A | N7A | 2.8° | 0.4° |
| N9A | C4A | C5A | C6A | 179.8° | 179.6° |
| N9A | C4A | N3A | C2A | 179.0° | 180.0° |
| C4A | C5A | N7A | C6A | 176.9° | 179.0° |
| C4A | C5A | N7A | C1' | 173.8° | 179.9° |
| C5A | C4A | N3A | C2A | 1.9° | 0.3° |
| C4A | C5A | C6A | N1A | 0.2° | 0.6° |
| C4A | C5A | C6A | N6A | 178.6° | 179.8° |
| N3A | C4A | C5A | N7A | 179.6° | 179.8° |
| N3A | C4A | C5A | C6A | 2.2° | 0.6° |
| C4A | N3A | C2A | N1A | 0.4° | 0.0° |
| C4A | N3A | C2A | H2A | 179.6° | 180.0° |
| N7A | C5A | C6A | N1A | 176.9° | 179.5° |
| N7A | C5A | C6A | N6A | 1.9° | 0.8° |
| C5A | N7A | C1' | O5' | 19.8° | 156.6° |
| C5A | N7A | C1' | C2' | 142.5° | 85.2° |
| C5A | N7A | C1' | H1' | 97.4° | 35.7° |
| C6A | C5A | N7A | C1' | 3.1° | 0.8° |
| C5A | C6A | N1A | C2A | 1.7° | 0.3° |
| C5A | C6A | N1A | N6A | 178.9° | 179.7° |
| C5A | C6A | N6A | HN61 | 180.0° | 173.4° |
| C5A | C6A | N6A | HN62 | 54.7° | 6.2° |
| N7A | C1' | O5' | C4' | 117.6° | 117.8° |
| N7A | C1' | O5' | C2' | 129.5° | 119.5° |
| N7A | C1' | O5' | H1' | 108.4° | 120.9° |
| N7A | C1' | C2' | C3' | 96.3° | 140.9° |
| N7A | C1' | C2' | O2' | 14.3° | 22.6° |
| N7A | C1' | C2' | H1' | 108.9° | 120.9° |
| N7A | C1' | C2' | H2' | 136.6° | 100.9° |
| N3A | C2A | N1A | H2A | 180.0° | 180.0° |
| N3A | C2A | N1A | C6A | 2.2° | 0.0° |
| C2A | N1A | C6A | N6A | 179.3° | 180.0° |
| H2A | C2A | N1A | C6A | 177.8° | 179.9° |
| N1A | C6A | N6A | HN61 | 1.2° | 6.9° |
| N1A | C6A | N6A | HN62 | 124.1° | 173.4° |
| C6A | N6A | HN61 | HN62 | 125.3° | 179.7° |
| O1P | P | O2P | O3P | 120.2° | 120.0° |
| O1P | P | O2P | O6' | 122.6° | 119.9° |
| O1P | P | O3P | O6' | 121.2° | 120.0° |
| O1P | P | O2P | HOP2 | 180.0° | 60.1° |
| O1P | P | O3P | HOP3 | 180.0° | 180.0° |
| O1P | P | O6' | C5' | 43.4° | 60.1° |
| O2P | P | O3P | O6' | 119.0° | 120.1° |
| O2P | P | O3P | HOP3 | 60.1° | 60.0° |
| O2P | P | O6' | C5' | 164.6° | 180.0° |
| O3P | P | O2P | HOP2 | 59.8° | 59.9° |
| O3P | P | O6' | C5' | 76.8° | 60.0° |
| O6' | P | O2P | HOP2 | 57.4° | 180.0° |
| O6' | P | O3P | HOP3 | 58.8° | 60.1° |
| P | O6' | C5' | C4' | 115.9° | 180.0° |
| P | O6' | C5' | H5'1 | 118.8° | 59.9° |
| P | O6' | C5' | H5'2 | 9.4° | 60.0° |
| O6' | C5' | C4' | H5'1 | 125.3° | 120.0° |
| O6' | C5' | C4' | H5'2 | 125.3° | 120.0° |
| O6' | C5' | H5'1 | H5'2 | 118.9° | 119.9° |
| O6' | C5' | C4' | O5' | 46.9° | 61.4° |
| O6' | C5' | C4' | C3' | 167.2° | 177.2° |
| O6' | C5' | C4' | H4' | 75.0° | 60.7° |
| C4' | C5' | H5'1 | H5'2 | 118.9° | 120.0° |
| C5' | C4' | O5' | C3' | 127.1° | 119.0° |
| C5' | C4' | O5' | H4' | 114.2° | 122.1° |
| C5' | C4' | C3' | H4' | 113.8° | 122.1° |
| C5' | C4' | O5' | C1' | 111.2° | 143.4° |
| C5' | C4' | C3' | O3' | 159.0° | 86.7° |
| C5' | C4' | C3' | C2' | 86.8° | 155.4° |
| C5' | C4' | C3' | H3' | 38.6° | 37.5° |
| H5'1 | C5' | C4' | O5' | 78.4° | 178.5° |
| H5'1 | C5' | C4' | C3' | 42.0° | 62.8° |
| H5'1 | C5' | C4' | H4' | 159.7° | 59.4° |
| H5'2 | C5' | C4' | O5' | 172.1° | 58.5° |
| H5'2 | C5' | C4' | C3' | 67.5° | 57.2° |
| H5'2 | C5' | C4' | H4' | 50.2° | 179.4° |
| O5' | C4' | C3' | H4' | 122.4° | 118.9° |
| O5' | C4' | C3' | O3' | 77.2° | 154.3° |
| O5' | C4' | C3' | C2' | 37.1° | 36.4° |
| O5' | C4' | C3' | H3' | 162.5° | 81.5° |
| C4' | O5' | C1' | C2' | 12.0° | 1.7° |
| C4' | O5' | C1' | H1' | 134.0° | 121.3° |
| C3' | C4' | O5' | C1' | 15.9° | 24.4° |
| C4' | C3' | O3' | C2' | 109.1° | 111.6° |
| C4' | C3' | O3' | H3' | 124.6° | 124.3° |
| C4' | C3' | C2' | H3' | 123.2° | 118.0° |
| C4' | C3' | O3' | HO3' | 180.0° | 179.9° |
| C4' | C3' | C2' | O2' | 161.9° | 84.2° |
| C4' | C3' | C2' | C1' | 44.3° | 34.1° |
| C4' | C3' | C2' | H2' | 77.1° | 152.4° |
| H4' | C4' | O5' | C1' | 134.6° | 94.5° |
| H4' | C4' | C3' | O3' | 45.2° | 35.4° |
| H4' | C4' | C3' | C2' | 159.4° | 82.5° |
| H4' | C4' | C3' | H3' | 75.2° | 159.6° |
| O5' | C1' | C2' | C3' | 35.1° | 21.3° |
| O5' | C1' | C2' | O2' | 145.7° | 96.9° |
| O5' | C1' | C2' | H1' | 119.7° | 119.6° |
| O5' | C1' | C2' | H2' | 92.0° | 139.5° |
| O3' | C3' | C2' | H3' | 120.0° | 124.1° |
| O3' | C3' | C2' | O2' | 45.1° | 33.7° |
| O3' | C3' | C2' | C1' | 72.5° | 152.0° |
| O3' | C3' | C2' | H2' | 166.1° | 89.7° |
| C2' | C3' | O3' | HO3' | 70.9° | 68.4° |
| C3' | C2' | O2' | C1' | 110.1° | 112.9° |
| C3' | C2' | O2' | H2' | 127.2° | 123.4° |
| C3' | C2' | C1' | H2' | 127.1° | 118.2° |
| C3' | C2' | O2' | HO2' | 180.0° | 61.5° |
| C3' | C2' | C1' | H1' | 154.8° | 98.3° |
| H3' | C3' | O3' | HO3' | 55.4° | 55.8° |
| H3' | C3' | C2' | O2' | 74.9° | 157.8° |
| H3' | C3' | C2' | C1' | 167.5° | 83.9° |
| H3' | C3' | C2' | H2' | 46.1° | 34.4° |
| O2' | C2' | C1' | H2' | 122.3° | 123.5° |
| O2' | C2' | C1' | H1' | 94.6° | 143.5° |
| C1' | C2' | O2' | HO2' | 69.9° | 174.3° |
| H2' | C2' | O2' | HO2' | 52.8° | 62.0° |
| H2' | C2' | C1' | H1' | 27.7° | 19.9° |
