A9P
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C5 | C4 | sing | 1.51Å | 1.49Å | |
C4 | N | doub | 1.30Å | 1.30Å | Aromatic |
C4 | C6 | sing | 1.42Å | 1.41Å | Aromatic |
N | O | sing | 1.21Å | 1.42Å | Aromatic |
O | C3 | sing | 1.34Å | 1.34Å | Aromatic |
C6 | C3 | doub | 1.37Å | 1.37Å | Aromatic |
C6 | C7 | sing | 1.48Å | 1.49Å | |
C3 | C2 | sing | 1.51Å | 1.49Å | |
C7 | C12 | sing | 1.39Å | 1.40Å | Aromatic |
C7 | C8 | doub | 1.39Å | 1.40Å | Aromatic |
C12 | C11 | doub | 1.38Å | 1.39Å | Aromatic |
C11 | C10 | sing | 1.38Å | 1.39Å | Aromatic |
C10 | C9 | doub | 1.38Å | 1.38Å | Aromatic |
C9 | C8 | sing | 1.38Å | 1.39Å | Aromatic |
C5 | H51C | sing | 1.09Å | 1.10Å | |
C5 | H52C | sing | 1.09Å | 1.10Å | |
C5 | H53C | sing | 1.09Å | 1.10Å | |
C2 | H21C | sing | 1.09Å | 1.10Å | |
C2 | H22C | sing | 1.09Å | 1.10Å | |
C2 | H23C | sing | 1.09Å | 1.10Å | |
C12 | H12 | sing | 1.08Å | 1.08Å | |
C8 | H8 | sing | 1.08Å | 1.08Å | |
C11 | H11 | sing | 1.08Å | 1.08Å | |
C10 | H10 | sing | 1.08Å | 1.08Å | |
C9 | H9 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C5 | C4 | N | 118.7° | 126.9° |
C5 | C4 | C6 | 129.8° | 126.9° |
C4 | C5 | H51C | 109.5° | 109.5° |
C4 | C5 | H52C | 109.5° | 109.5° |
C4 | C5 | H53C | 109.5° | 109.5° |
N | C4 | C6 | 111.4° | 106.2° |
C4 | N | O | 106.3° | 112.0° |
C4 | C6 | C3 | 104.7° | 103.7° |
C4 | C6 | C7 | 128.4° | 128.1° |
N | O | C3 | 107.9° | 111.9° |
O | C3 | C6 | 109.7° | 106.2° |
O | C3 | C2 | 116.0° | 126.9° |
C3 | C6 | C7 | 126.8° | 128.2° |
C6 | C3 | C2 | 134.3° | 126.8° |
C6 | C7 | C12 | 120.6° | 120.2° |
C6 | C7 | C8 | 120.5° | 120.1° |
C3 | C2 | H21C | 109.5° | 109.4° |
C3 | C2 | H22C | 109.4° | 109.5° |
C3 | C2 | H23C | 109.5° | 109.5° |
C12 | C7 | C8 | 118.9° | 119.7° |
C7 | C12 | C11 | 120.2° | 119.9° |
C7 | C12 | H12 | 119.9° | 120.0° |
C7 | C8 | C9 | 120.7° | 119.9° |
C7 | C8 | H8 | 119.6° | 120.1° |
C12 | C11 | C10 | 120.2° | 120.1° |
C11 | C12 | H12 | 119.9° | 120.0° |
C12 | C11 | H11 | 119.9° | 119.9° |
C11 | C10 | C9 | 119.8° | 120.2° |
C10 | C11 | H11 | 119.9° | 120.0° |
C11 | C10 | H10 | 120.1° | 119.9° |
C10 | C9 | C8 | 120.2° | 120.1° |
C9 | C10 | H10 | 120.1° | 119.9° |
C10 | C9 | H9 | 119.9° | 119.9° |
C9 | C8 | H8 | 119.7° | 120.1° |
C8 | C9 | H9 | 119.9° | 120.0° |
H51C | C5 | H52C | 109.5° | 109.4° |
H51C | C5 | H53C | 109.5° | 109.4° |
H52C | C5 | H53C | 109.4° | 109.5° |
H21C | C2 | H22C | 109.5° | 109.5° |
H21C | C2 | H23C | 109.4° | 109.5° |
H22C | C2 | H23C | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C5 | C4 | N | C6 | 180.0° | 179.7° |
C5 | C4 | N | O | 179.8° | 179.9° |
C5 | C4 | C6 | C3 | 179.9° | 179.9° |
C5 | C4 | C6 | C7 | 0.1° | 0.1° |
C4 | C5 | H51C | H52C | 120.0° | 120.0° |
C4 | C5 | H51C | H53C | 120.0° | 120.0° |
C4 | C5 | H52C | H53C | 120.0° | 120.1° |
C4 | N | O | C3 | 0.2° | 0.0° |
N | C4 | C6 | C3 | 0.1° | 0.4° |
N | C4 | C6 | C7 | 179.9° | 179.7° |
N | C4 | C5 | H51C | 0.0° | 90.1° |
N | C4 | C5 | H52C | 120.0° | 150.0° |
N | C4 | C5 | H53C | 120.0° | 29.9° |
C6 | C4 | N | O | 0.2° | 0.3° |
C4 | C6 | C3 | O | 0.0° | 0.4° |
C4 | C6 | C3 | C7 | 179.8° | 179.9° |
C4 | C6 | C3 | C2 | 179.9° | 179.9° |
C4 | C6 | C7 | C12 | 55.1° | 115.0° |
C4 | C6 | C7 | C8 | 124.2° | 65.3° |
C6 | C4 | C5 | H51C | 179.9° | 90.3° |
C6 | C4 | C5 | H52C | 59.9° | 29.6° |
C6 | C4 | C5 | H53C | 60.0° | 149.7° |
N | O | C3 | C6 | 0.1° | 0.3° |
N | O | C3 | C2 | 179.8° | 180.0° |
O | C3 | C6 | C2 | 179.8° | 179.8° |
O | C3 | C6 | C7 | 179.8° | 179.8° |
O | C3 | C2 | H21C | 0.0° | 0.0° |
O | C3 | C2 | H22C | 120.0° | 120.0° |
O | C3 | C2 | H23C | 120.0° | 120.0° |
C3 | C6 | C7 | C12 | 124.6° | 64.8° |
C3 | C6 | C7 | C8 | 56.1° | 114.8° |
C6 | C3 | C2 | H21C | 179.8° | 179.7° |
C6 | C3 | C2 | H22C | 60.2° | 59.7° |
C6 | C3 | C2 | H23C | 59.8° | 60.3° |
C7 | C6 | C3 | C2 | 0.4° | 0.0° |
C6 | C7 | C12 | C8 | 179.3° | 179.7° |
C6 | C7 | C12 | C11 | 179.2° | 180.0° |
C6 | C7 | C8 | C9 | 179.0° | 179.7° |
C6 | C7 | C12 | H12 | 0.9° | 0.1° |
C6 | C7 | C8 | H8 | 1.0° | 0.0° |
C3 | C2 | H21C | H22C | 120.0° | 120.0° |
C3 | C2 | H21C | H23C | 120.0° | 120.0° |
C3 | C2 | H22C | H23C | 120.0° | 120.0° |
C7 | C12 | C11 | H12 | 180.0° | 180.0° |
C7 | C12 | C11 | C10 | 0.1° | 0.0° |
C12 | C7 | C8 | C9 | 0.3° | 0.6° |
C12 | C7 | C8 | H8 | 179.7° | 179.7° |
C7 | C12 | C11 | H11 | 179.9° | 180.0° |
C8 | C7 | C12 | C11 | 0.2° | 0.3° |
C7 | C8 | C9 | C10 | 0.2° | 0.6° |
C7 | C8 | C9 | H8 | 180.0° | 179.7° |
C8 | C7 | C12 | H12 | 179.8° | 179.8° |
C7 | C8 | C9 | H9 | 179.8° | 179.7° |
C12 | C11 | C10 | H11 | 180.0° | 179.9° |
C12 | C11 | C10 | C9 | 0.2° | 0.1° |
C12 | C11 | C10 | H10 | 179.8° | 179.9° |
C11 | C10 | C9 | H10 | 180.0° | 180.0° |
C11 | C10 | C9 | C8 | 0.0° | 0.3° |
C10 | C11 | C12 | H12 | 179.9° | 179.9° |
C11 | C10 | C9 | H9 | 180.0° | 180.0° |
C10 | C9 | C8 | H9 | 180.0° | 179.7° |
C10 | C9 | C8 | H8 | 179.8° | 179.7° |
C9 | C10 | C11 | H11 | 179.8° | 180.0° |
C8 | C9 | C10 | H10 | 180.0° | 179.7° |
H51C | C5 | H52C | H53C | 120.0° | 119.9° |
H21C | C2 | H22C | H23C | 120.0° | 120.0° |
H12 | C12 | C11 | H11 | 0.1° | 0.0° |
H8 | C8 | C9 | H9 | 0.2° | 0.0° |
H11 | C11 | C10 | H10 | 0.2° | 0.0° |
H10 | C10 | C9 | H9 | 0.0° | 0.0° |