A6P
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | C2 | sing | 1.53Å | 1.55Å | |
C1 | O1 | sing | 1.43Å | 1.42Å | |
C1 | O5 | sing | 1.43Å | 1.44Å | |
C2 | C3 | sing | 1.53Å | 1.53Å | |
C2 | O2 | sing | 1.43Å | 1.45Å | |
C3 | C4 | sing | 1.53Å | 1.53Å | |
C3 | O3 | sing | 1.43Å | 1.46Å | |
C4 | C5 | sing | 1.53Å | 1.53Å | |
C4 | O4 | sing | 1.43Å | 1.43Å | |
C5 | C6 | sing | 1.53Å | 1.52Å | |
C5 | O5 | sing | 1.43Å | 1.43Å | |
C6 | O6 | sing | 1.43Å | 1.44Å | |
O6 | P | sing | 1.61Å | 1.62Å | |
P | O1P | sing | 1.61Å | 1.51Å | |
P | O2P | doub | 1.48Å | 1.47Å | |
P | O3P | sing | 1.61Å | 1.51Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C2 | H2 | sing | 1.09Å | 1.10Å | |
O1 | HO1 | sing | 0.97Å | 0.95Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å | |
C4 | H4 | sing | 1.09Å | 1.10Å | |
O3 | HO3 | sing | 0.97Å | 0.95Å | |
C5 | H5 | sing | 1.09Å | 1.10Å | |
O4 | HO4 | sing | 0.97Å | 0.95Å | |
C6 | H61 | sing | 1.09Å | 1.10Å | |
C6 | H62 | sing | 1.09Å | 1.10Å | |
O1P | H1P | sing | 0.97Å | 0.95Å | |
O3P | H3P | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | C1 | O1 | 111.9° | 109.5° |
C2 | C1 | O5 | 111.4° | 109.4° |
C1 | C2 | C3 | 112.4° | 109.2° |
C1 | C2 | O2 | 113.3° | 109.6° |
C2 | C1 | H1 | 106.1° | 109.4° |
C1 | C2 | H2 | 104.1° | 109.5° |
O1 | C1 | O5 | 108.4° | 109.5° |
O1 | C1 | H1 | 109.2° | 109.4° |
C1 | O1 | HO1 | 109.5° | 114.1° |
C1 | O5 | C5 | 116.0° | 114.1° |
O5 | C1 | H1 | 109.8° | 109.5° |
C3 | C2 | O2 | 107.7° | 109.5° |
C2 | C3 | C4 | 113.5° | 109.0° |
C2 | C3 | O3 | 110.5° | 109.5° |
C3 | C2 | H2 | 110.1° | 109.5° |
C2 | C3 | H3 | 106.4° | 109.6° |
O2 | C2 | H2 | 109.1° | 109.6° |
C2 | O2 | HO2 | 109.5° | 114.0° |
C4 | C3 | O3 | 111.1° | 109.5° |
C3 | C4 | C5 | 111.9° | 109.2° |
C3 | C4 | O4 | 109.1° | 109.5° |
C4 | C3 | H3 | 105.8° | 109.6° |
C3 | C4 | H4 | 107.8° | 109.5° |
O3 | C3 | H3 | 109.2° | 109.6° |
C3 | O3 | HO3 | 109.5° | 114.0° |
C5 | C4 | O4 | 108.6° | 109.5° |
C4 | C5 | C6 | 111.2° | 109.5° |
C4 | C5 | O5 | 109.8° | 109.4° |
C5 | C4 | H4 | 108.3° | 109.5° |
C4 | C5 | H5 | 107.8° | 109.5° |
O4 | C4 | H4 | 111.1° | 109.5° |
C4 | O4 | HO4 | 109.5° | 114.0° |
C6 | C5 | O5 | 108.6° | 109.5° |
C5 | C6 | O6 | 108.6° | 109.5° |
C6 | C5 | H5 | 109.1° | 109.4° |
C5 | C6 | H61 | 109.7° | 109.5° |
C5 | C6 | H62 | 109.9° | 109.4° |
O5 | C5 | H5 | 110.4° | 109.5° |
C6 | O6 | P | 121.8° | 122.9° |
O6 | C6 | H61 | 109.8° | 109.5° |
O6 | C6 | H62 | 109.9° | 109.5° |
O6 | P | O1P | 105.4° | 109.5° |
O6 | P | O2P | 105.0° | 109.5° |
O6 | P | O3P | 105.9° | 109.4° |
O1P | P | O2P | 112.3° | 109.5° |
O1P | P | O3P | 112.8° | 109.4° |
P | O1P | H1P | 109.5° | 114.0° |
O2P | P | O3P | 114.5° | 109.5° |
P | O3P | H3P | 109.5° | 114.0° |
H61 | C6 | H62 | 108.8° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | C1 | O1 | O5 | 123.2° | 120.0° |
C2 | C1 | O1 | H1 | 117.1° | 119.9° |
C2 | C1 | O5 | H1 | 117.2° | 120.0° |
C1 | C2 | C3 | O2 | 125.6° | 120.0° |
C1 | C2 | C3 | H2 | 115.6° | 119.9° |
C1 | C2 | O2 | H2 | 115.5° | 120.1° |
C1 | C2 | C3 | C4 | 43.2° | 56.9° |
C1 | C2 | C3 | O3 | 82.4° | 62.9° |
C2 | C1 | O5 | C5 | 57.0° | 61.1° |
C2 | C1 | O1 | HO1 | 46.1° | 180.0° |
C1 | C2 | C3 | H3 | 159.2° | 176.8° |
C1 | C2 | O2 | HO2 | 28.1° | 60.0° |
O1 | C1 | O5 | H1 | 119.2° | 120.0° |
O1 | C1 | C2 | C3 | 75.3° | 62.4° |
O1 | C1 | C2 | O2 | 47.2° | 57.5° |
O1 | C1 | O5 | C5 | 66.6° | 58.9° |
O1 | C1 | C2 | H2 | 165.6° | 177.7° |
O5 | C1 | C2 | C3 | 46.2° | 57.6° |
O5 | C1 | C2 | O2 | 168.7° | 177.5° |
C1 | O5 | C5 | C4 | 60.5° | 61.1° |
C1 | O5 | C5 | C6 | 177.7° | 178.8° |
O5 | C1 | C2 | H2 | 72.9° | 62.3° |
O5 | C1 | O1 | HO1 | 77.2° | 60.0° |
C1 | O5 | C5 | H5 | 58.2° | 58.9° |
C3 | C2 | O2 | H2 | 119.5° | 120.1° |
C2 | C3 | C4 | O3 | 125.3° | 119.8° |
C2 | C3 | C4 | H3 | 116.4° | 119.9° |
C2 | C3 | O3 | H3 | 116.7° | 120.2° |
C2 | C3 | C4 | C5 | 47.0° | 56.9° |
C2 | C3 | C4 | O4 | 167.3° | 176.9° |
C3 | C2 | C1 | H1 | 165.7° | 177.6° |
C3 | C2 | O2 | HO2 | 153.1° | 179.7° |
C2 | C3 | C4 | H4 | 72.0° | 63.0° |
C2 | C3 | O3 | HO3 | 157.9° | 60.0° |
O2 | C2 | C3 | C4 | 168.7° | 176.9° |
O2 | C2 | C3 | O3 | 43.1° | 57.1° |
O2 | C2 | C1 | H1 | 71.9° | 62.4° |
O2 | C2 | C3 | H3 | 75.2° | 63.2° |
C4 | C3 | O3 | H3 | 116.3° | 120.3° |
C3 | C4 | C5 | O4 | 120.6° | 119.9° |
C3 | C4 | C5 | H4 | 118.7° | 119.9° |
C3 | C4 | O4 | H4 | 118.7° | 120.1° |
C3 | C4 | C5 | C6 | 173.5° | 177.6° |
C3 | C4 | C5 | O5 | 53.4° | 57.6° |
C4 | C3 | C2 | H2 | 72.4° | 62.9° |
C4 | C3 | O3 | HO3 | 75.1° | 179.5° |
C3 | C4 | C5 | H5 | 67.0° | 62.4° |
C3 | C4 | O4 | HO4 | 111.3° | 60.0° |
O3 | C3 | C4 | C5 | 78.2° | 62.9° |
O3 | C3 | C4 | O4 | 42.0° | 57.1° |
O3 | C3 | C2 | H2 | 162.0° | 177.2° |
O3 | C3 | C4 | H4 | 162.8° | 177.2° |
C5 | C4 | O4 | H4 | 119.0° | 120.2° |
C4 | C5 | C6 | O5 | 120.9° | 120.0° |
C4 | C5 | C6 | H5 | 118.7° | 120.0° |
C4 | C5 | O5 | H5 | 118.7° | 120.0° |
C4 | C5 | C6 | O6 | 179.7° | 175.0° |
C5 | C4 | C3 | H3 | 163.4° | 176.8° |
C5 | C4 | O4 | HO4 | 126.4° | 179.7° |
C4 | C5 | C6 | H61 | 59.7° | 55.0° |
C4 | C5 | C6 | H62 | 60.0° | 65.0° |
O4 | C4 | C5 | C6 | 65.9° | 62.5° |
O4 | C4 | C5 | O5 | 173.9° | 177.5° |
O4 | C4 | C3 | H3 | 76.3° | 63.2° |
O4 | C4 | C5 | H5 | 53.6° | 57.5° |
C6 | C5 | O5 | H5 | 119.5° | 120.0° |
C5 | C6 | O6 | H61 | 120.0° | 120.0° |
C5 | C6 | O6 | H62 | 120.3° | 120.0° |
C5 | C6 | O6 | P | 173.6° | 180.0° |
C6 | C5 | C4 | H4 | 54.9° | 57.7° |
C5 | C6 | H61 | H62 | 120.4° | 120.0° |
O5 | C5 | C6 | O6 | 59.4° | 65.0° |
C5 | O5 | C1 | H1 | 174.2° | 178.9° |
O5 | C5 | C4 | H4 | 65.3° | 62.3° |
O5 | C5 | C6 | H61 | 179.4° | 175.0° |
O5 | C5 | C6 | H62 | 61.0° | 55.0° |
C6 | O6 | P | O1P | 58.3° | 65.0° |
C6 | O6 | P | O2P | 60.5° | 55.1° |
C6 | O6 | P | O3P | 178.0° | 175.0° |
O6 | C6 | C5 | H5 | 61.0° | 55.0° |
O6 | C6 | H61 | H62 | 120.3° | 120.0° |
O6 | P | O1P | O2P | 113.7° | 120.1° |
O6 | P | O1P | O3P | 115.1° | 120.0° |
O6 | P | O2P | O3P | 115.7° | 120.0° |
P | O6 | C6 | H61 | 53.6° | 60.0° |
P | O6 | C6 | H62 | 66.1° | 60.0° |
O6 | P | O1P | H1P | 100.4° | 60.0° |
O6 | P | O3P | H3P | 79.5° | 180.0° |
O1P | P | O2P | O3P | 130.3° | 120.0° |
O1P | P | O3P | H3P | 35.2° | 60.1° |
O2P | P | O1P | H1P | 13.4° | 180.0° |
O2P | P | O3P | H3P | 165.4° | 60.0° |
O3P | P | O1P | H1P | 144.6° | 60.0° |
H1 | C1 | C2 | H2 | 46.6° | 57.8° |
H1 | C1 | O1 | HO1 | 163.2° | 60.1° |
H2 | C2 | C3 | H3 | 43.6° | 57.0° |
H2 | C2 | O2 | HO2 | 87.4° | 60.2° |
H3 | C3 | C4 | H4 | 44.4° | 56.9° |
H3 | C3 | O3 | HO3 | 41.2° | 60.2° |
H4 | C4 | C5 | H5 | 174.4° | 177.7° |
H4 | C4 | O4 | HO4 | 7.4° | 60.2° |
H5 | C5 | C6 | H61 | 59.0° | 65.0° |
H5 | C5 | C6 | H62 | 178.7° | 175.0° |