Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

A5Z

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C4sing1.43Å1.43Å
CC1sing1.51Å1.48Å
C4C3sing1.51Å1.49Å
C1C3doub1.35Å1.34ÅAromatic
C1Osing1.34Å1.36ÅAromatic
C3C2sing1.42Å1.42ÅAromatic
CL1C10sing1.74Å1.73Å
ONsing1.21Å1.35ÅAromatic
C2Ndoub1.31Å1.32ÅAromatic
C2C5sing1.48Å1.48Å
C10C5doub1.39Å1.39ÅAromatic
C10C9sing1.38Å1.38ÅAromatic
C5C6sing1.39Å1.39ÅAromatic
C9C8doub1.38Å1.37ÅAromatic
C6CLsing1.74Å1.73Å
C6C7doub1.38Å1.38ÅAromatic
C8C7sing1.38Å1.37ÅAromatic
C9H1sing1.08Å1.08Å
C8H2sing1.08Å1.08Å
C7H3sing1.08Å1.08Å
C4H4sing1.09Å1.10Å
C4H5sing1.09Å1.10Å
O1H6sing0.97Å0.95Å
CH7sing1.09Å1.10Å
CH8sing1.09Å1.10Å
CH9sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C4C3109.9°109.5°
O1C4H4109.4°109.4°
O1C4H5109.4°109.5°
C4O1H6109.5°114.0°
CC1C3134.2°126.7°
CC1O116.2°126.6°
C1CH7109.5°109.5°
C1CH8109.5°109.5°
C1CH9109.5°109.4°
C4C3C1126.6°128.0°
C4C3C2129.5°128.0°
C3C4H4109.4°109.5°
C3C4H5109.4°109.5°
C3C1O109.6°106.7°
C1C3C2103.8°103.9°
C1ON109.0°111.8°
C3C2N110.8°106.1°
C3C2C5130.8°127.0°
CL1C10C5119.8°120.1°
CL1C10C9119.7°120.1°
ONC2106.7°111.4°
NC2C5118.4°126.9°
C2C5C10121.8°120.1°
C2C5C6119.8°120.1°
C5C10C9120.5°119.9°
C10C5C6118.4°119.7°
C10C9C8120.1°120.1°
C10C9H1120.0°119.9°
C5C6CL119.6°120.1°
C5C6C7120.9°119.9°
C9C8C7120.5°120.3°
C8C9H1120.0°119.9°
C9C8H2119.8°119.9°
CLC6C7119.5°120.0°
C6C7C8119.7°120.1°
C6C7H3120.2°119.9°
C7C8H2119.7°119.8°
C8C7H3120.2°120.0°
H4C4H5109.4°109.5°
H7CH8109.4°109.5°
H7CH9109.5°109.4°
H8CH9109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C4C3H4120.1°120.0°
O1C4C3H5120.1°120.0°
O1C4C3C189.2°84.3°
O1C4C3C288.5°96.0°
O1C4H4H5119.8°120.0°
CC1C3C41.6°0.1°
CC1C3O179.6°180.0°
CC1C3C2179.8°179.7°
CC1ON179.3°179.8°
C1CH7H8120.0°120.0°
C1CH7H9120.0°119.9°
C1CH8H9120.0°120.0°
C4C3C1C2178.2°179.8°
C4C3C1O178.8°180.0°
C4C3C2N178.1°180.0°
C4C3C2C51.2°0.0°
C3C4H4H5119.8°120.0°
C3C4O1H6180.0°180.0°
C3C1ON1.1°0.2°
C1C3C2N0.0°0.2°
C1C3C2C5179.3°179.8°
C1C3C4H4150.7°35.6°
C1C3C4H530.8°155.6°
C3C1CH7179.5°90.0°
C3C1CH859.5°149.9°
C3C1CH960.5°30.0°
OC1C3C20.6°0.2°
C1ONC21.1°0.0°
OC1CH70.0°90.1°
OC1CH8120.0°30.0°
OC1CH9120.0°150.0°
C3C2NO0.7°0.2°
C3C2NC5179.4°180.0°
C3C2C5C1053.2°58.5°
C3C2C5C6126.9°121.4°
C2C3C4H431.6°144.1°
C2C3C4H5151.4°24.1°
CL1C10C5C21.5°0.4°
CL1C10C5C9177.8°179.7°
CL1C10C5C6178.4°179.8°
CL1C10C9C8179.0°179.7°
CL1C10C9H11.0°0.3°
ONC2C5179.9°179.9°
NC2C5C10127.6°121.6°
NC2C5C652.3°58.6°
C2C5C10C6180.0°179.9°
C2C5C10C9179.4°180.0°
C2C5C6CL1.1°0.1°
C2C5C6C7179.3°180.0°
C5C10C9C81.2°0.1°
C10C5C6CL178.9°179.9°
C10C5C6C70.7°0.1°
C5C10C9H1178.8°180.0°
C9C10C5C60.6°0.1°
C10C9C8H1180.0°180.0°
C10C9C8C70.4°0.0°
C10C9C8H2179.6°179.9°
C5C6CLC7178.2°180.0°
C5C6C7C81.5°0.0°
C5C6C7H3178.5°179.9°
C9C8C7C60.9°0.0°
C9C8C7H2180.0°179.9°
C9C8C7H3179.1°180.0°
CLC6C7C8179.7°180.0°
CLC6C7H30.3°0.0°
C6C7C8H3180.0°180.0°
C6C7C8H2179.0°179.9°
C7C8C9H1179.6°180.0°
H1C9C8H20.4°0.0°
H2C8C7H31.0°0.1°
H4C4O1H659.9°60.0°
H5C4O1H660.0°60.0°
H7CH8H9119.9°120.0°

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon