Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

A5V

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C13C14sing1.53Å1.53Å
C13C12sing1.53Å1.52Å
C14C9sing1.53Å1.52Å
C12C11sing1.53Å1.52Å
CNsing1.47Å1.49Å
CC1sing1.53Å1.53Å
C9C8sing1.53Å1.52Å
C9C10sing1.53Å1.53Å
C11C10sing1.53Å1.53Å
C8O1sing1.43Å1.43Å
C1C2sing1.53Å1.52Å
C2Osing1.43Å1.42Å
C2C3sing1.51Å1.52Å
C15C3doub1.38Å1.40ÅAromatic
C15C7sing1.39Å1.40ÅAromatic
O1C7sing1.36Å1.38Å
C3C4sing1.38Å1.39ÅAromatic
C7C6doub1.39Å1.38ÅAromatic
C4C5doub1.38Å1.38ÅAromatic
C6C5sing1.38Å1.38ÅAromatic
OH1sing0.97Å0.95Å
C2H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C1H4sing1.09Å1.10Å
CH5sing1.09Å1.10Å
CH6sing1.09Å1.10Å
NH7sing1.01Å1.00Å
NH8sing1.01Å1.00Å
C15H10sing1.08Å1.08Å
C6H11sing1.08Å1.08Å
C5H12sing1.08Å1.08Å
C4H13sing1.08Å1.08Å
C8H14sing1.09Å1.10Å
C8H15sing1.09Å1.10Å
C9H16sing1.09Å1.10Å
C14H17sing1.09Å1.10Å
C14H18sing1.09Å1.10Å
C13H19sing1.09Å1.10Å
C13H20sing1.09Å1.10Å
C12H21sing1.09Å1.10Å
C12H22sing1.09Å1.10Å
C11H23sing1.09Å1.10Å
C11H24sing1.09Å1.10Å
C10H25sing1.09Å1.10Å
C10H26sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C14C13C12111.8°109.5°
C13C14C9112.6°109.5°
C13C14H17108.7°109.5°
C13C14H18108.7°109.5°
C14C13H19108.9°109.4°
C14C13H20108.9°109.4°
C13C12C11110.7°109.5°
C12C13H19108.9°109.5°
C12C13H20108.9°109.5°
C13C12H21109.2°109.5°
C13C12H22109.1°109.5°
C14C9C8111.6°109.5°
C14C9C10108.7°109.5°
C14C9H16108.3°109.4°
C9C14H17108.7°109.4°
C9C14H18108.7°109.5°
C12C11C10111.5°109.4°
C11C12H21109.2°109.5°
C11C12H22109.2°109.4°
C12C11H23109.0°109.5°
C12C11H24109.0°109.5°
NCC1118.3°109.4°
NCH5107.2°109.4°
NCH6107.2°109.5°
CNH7109.5°110.9°
CNH8109.5°111.0°
CC1C2114.2°109.4°
CC1H3108.3°109.5°
CC1H4108.3°109.5°
C1CH5107.2°109.4°
C1CH6107.2°109.5°
C8C9C10111.3°109.5°
C9C8O1107.3°109.5°
C9C8H14110.0°109.5°
C9C8H15110.0°109.5°
C8C9H16108.5°109.5°
C9C10C11113.2°109.5°
C10C9H16108.3°109.5°
C9C10H25108.5°109.4°
C9C10H26108.5°109.5°
C10C11H23109.0°109.5°
C10C11H24109.0°109.5°
C11C10H25108.5°109.4°
C11C10H26108.5°109.5°
C8O1C7121.8°117.0°
O1C8H14110.0°109.4°
O1C8H15110.0°109.4°
C1C2O103.1°109.5°
C1C2C3115.3°109.5°
C1C2H2108.1°109.5°
C2C1H3108.2°109.4°
C2C1H4108.2°109.5°
OC2C3112.7°109.5°
C2OH1109.5°114.0°
OC2H2109.4°109.5°
C2C3C15120.5°120.0°
C2C3C4120.9°119.9°
C3C2H2108.1°109.5°
C3C15C7120.4°119.9°
C15C3C4118.6°120.1°
C3C15H10119.8°120.1°
C15C7O1121.0°120.0°
C15C7C6120.1°119.9°
C7C15H10119.8°120.0°
O1C7C6118.6°120.1°
C3C4C5120.7°120.1°
C3C4H13119.7°120.0°
C7C6C5119.4°120.0°
C7C6H11120.3°120.0°
C4C5C6120.7°120.0°
C4C5H12119.6°120.0°
C5C4H13119.6°119.9°
C5C6H11120.3°120.0°
C6C5H12119.7°119.9°
H3C1H4109.5°109.5°
H5CH6109.5°109.5°
H7NH8109.5°111.0°
H14C8H15109.5°109.5°
H17C14H18109.5°109.5°
H19C13H20109.5°109.4°
H21C12H22109.4°109.4°
H23C11H24109.5°109.6°
H25C10H26109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C14C13C12H19120.3°120.0°
C14C13C12H20120.3°120.0°
C13C14C9H17120.4°120.0°
C13C14C9H18120.5°120.0°
C14C13C12C1154.3°60.1°
C13C14C9C8177.9°180.0°
C13C14C9C1054.8°60.0°
C13C14C9H1662.7°60.0°
C13C14H17H18118.6°120.1°
C14C13H19H20119.0°119.9°
C14C13C12H2165.9°60.0°
C14C13C12H22174.5°180.0°
C12C13C14C956.1°60.0°
C13C12C11H21120.2°120.1°
C13C12C11H22120.2°120.0°
C13C12C11C1053.9°60.0°
C12C13C14H17176.5°59.9°
C12C13C14H1864.4°180.0°
C12C13H19H20118.9°120.1°
C13C12H21H22119.4°120.0°
C13C12C11H23174.2°180.0°
C13C12C11H2466.5°59.9°
C14C9C8C10121.6°120.0°
C14C9C8H16119.3°120.0°
C14C9C10H16117.5°120.0°
C14C9C10C1154.9°60.0°
C14C9C8O1166.3°65.0°
C14C9C8H1446.7°175.0°
C14C9C8H1574.0°55.0°
C9C14H17H18118.6°120.0°
C9C14C13H19176.4°180.0°
C9C14C13H2064.3°60.1°
C14C9C10H25175.4°180.0°
C14C9C10H2665.7°60.0°
C12C11C10C955.7°60.0°
C12C11C10H23120.3°119.9°
C12C11C10H24120.3°120.0°
C11C12C13H19174.6°180.0°
C11C12C13H2066.0°60.0°
C11C12H21H22119.4°119.9°
C12C11H23H24119.1°120.1°
C12C11C10H25176.2°180.0°
C12C11C10H2664.9°60.0°
NCC1H5121.3°119.9°
NCC1H6121.3°120.0°
NCC1C243.5°180.0°
NCC1H3164.2°60.1°
NCC1H477.1°60.0°
NCH5H6116.0°120.1°
CNH7H8120.0°123.9°
CC1C2H3120.7°120.0°
CC1C2H4120.7°120.0°
CC1C2O65.3°65.0°
CC1C2C3171.5°175.0°
CC1C2H250.5°55.0°
CC1H3H4117.9°120.0°
C1CH5H6116.0°120.1°
C1CNH7180.0°180.0°
C1CNH860.0°56.1°
C8C9C10H16119.2°120.0°
C8C9C10C11178.2°180.0°
C9C8O1H14119.7°120.1°
C9C8O1H15119.7°120.0°
C9C8O1C7171.1°180.0°
C9C8H14H15121.0°120.0°
C8C9C14H1761.6°60.0°
C8C9C14H1857.5°60.0°
C8C9C10H2561.3°60.0°
C8C9C10H2657.6°60.0°
C9C10C11H25120.5°119.9°
C9C10C11H26120.5°120.0°
C10C9C8O172.0°175.0°
C10C9C8H14168.3°55.0°
C10C9C8H1547.6°65.0°
C10C9C14H17175.2°60.0°
C10C9C14H1865.7°180.0°
C9C10C11H23176.0°180.0°
C9C10C11H2464.6°59.9°
C9C10H25H26118.3°120.0°
C11C10C9H1662.6°59.9°
C10C11C12H2166.4°60.1°
C10C11C12H22174.0°180.0°
C10C11H23H24119.1°120.0°
C11C10H25H26118.3°120.0°
C8O1C7C150.9°180.0°
C8O1C7C6173.7°0.1°
O1C8H14H15121.0°119.9°
O1C8C9H1647.1°55.0°
C1C2OC3124.9°120.0°
C1C2OH2114.8°120.0°
C1C2C3H2121.1°120.0°
C1C2C3C1576.5°94.7°
C1C2C3C4104.2°85.0°
C1C2OH1180.0°59.9°
C2C1H3H4117.8°120.0°
C2C1CH577.7°60.1°
C2C1CH6164.8°60.0°
OC2C3H2121.0°120.0°
OC2C3C15165.6°145.3°
OC2C3C413.7°35.0°
OC2C1H3174.0°55.0°
OC2C1H455.4°175.0°
C2C3C15C4179.3°179.7°
C2C3C15C7175.2°180.0°
C2C3C4C5176.5°179.8°
C3C2OH155.1°60.1°
C3C2C1H350.8°65.0°
C3C2C1H467.8°55.0°
C2C3C15H104.9°0.1°
C2C3C4H133.5°0.0°
C3C15C7H10180.0°179.9°
C3C15C7O1170.8°179.9°
C3C15C7C63.7°0.0°
C15C3C4C52.8°0.6°
C15C3C2H244.6°25.3°
C15C3C4H13177.2°179.7°
C15C7O1C6174.5°180.0°
C7C15C3C44.1°0.3°
C15C7C6C51.7°0.0°
C15C7C6H11178.3°180.0°
O1C7C6C5172.9°180.0°
O1C7C15H109.2°0.1°
O1C7C6H117.1°0.1°
C7O1C8H1469.2°60.0°
C7O1C8H1551.4°60.0°
C3C4C5H13180.0°179.8°
C3C4C5C60.9°0.5°
C4C3C2H2134.7°155.0°
C4C3C15H10175.8°179.8°
C3C4C5H12179.1°179.8°
C7C6C5C40.3°0.2°
C7C6C5H11180.0°180.0°
C6C7C15H10176.3°179.9°
C7C6C5H12179.7°180.0°
C4C5C6H12180.0°179.7°
C4C5C6H11179.7°179.7°
C6C5C4H13179.1°179.7°
H1OC2H265.1°180.0°
H2C2C1H370.3°175.0°
H2C2C1H4171.2°64.9°
H3C1CH543.0°180.0°
H3C1CH674.5°59.9°
H4C1CH5161.6°59.9°
H4C1CH644.1°180.0°
H5CNH758.8°60.1°
H5CNH861.3°176.0°
H6CNH758.7°60.0°
H6CNH8178.7°63.9°
H11C6C5H120.3°0.0°
H12C5C4H130.9°0.0°
H14C8C9H1672.6°65.0°
H15C8C9H16166.7°175.0°
H16C9C14H1757.7°180.0°
H16C9C14H18176.8°60.0°
H16C9C10H2557.9°60.0°
H16C9C10H26176.8°180.0°
H17C14C13H1963.2°60.1°
H17C14C13H2056.2°180.0°
H18C14C13H1955.9°60.0°
H18C14C13H20175.3°59.9°
H19C13C12H2154.4°60.0°
H19C13C12H2265.2°60.0°
H20C13C12H21173.7°180.0°
H20C13C12H2254.2°60.0°
H21C12C11H2353.9°59.9°
H21C12C11H24173.3°180.0°
H22C12C11H2365.7°60.0°
H22C12C11H2453.7°60.1°
H23C11C10H2563.5°60.1°
H23C11C10H2655.4°59.9°
H24C11C10H2555.9°60.0°
H24C11C10H26174.8°180.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon