A5P
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C1 | O1 | sing | 1.43Å | 1.22Å | |
| C1 | C2 | sing | 1.53Å | 1.52Å | |
| C1 | H11 | sing | 1.09Å | 1.12Å | |
| C1 | H12 | sing | 1.09Å | 1.11Å | |
| O1 | HO1 | sing | 0.97Å | 0.95Å | |
| C2 | O2 | sing | 1.43Å | 1.43Å | |
| C2 | C3 | sing | 1.53Å | 1.53Å | |
| C2 | HC2 | sing | 1.09Å | 1.12Å | |
| O2 | HO2 | sing | 0.97Å | 0.95Å | |
| C3 | O3 | sing | 1.43Å | 1.43Å | |
| C3 | C4 | sing | 1.53Å | 1.53Å | |
| C3 | HC3 | sing | 1.09Å | 1.11Å | |
| O3 | HO3 | sing | 0.97Å | 0.95Å | |
| C4 | O4 | sing | 1.43Å | 1.43Å | |
| C4 | C5 | sing | 1.53Å | 1.53Å | |
| C4 | HC4 | sing | 1.09Å | 1.12Å | |
| O4 | HO4 | sing | 0.97Å | 0.95Å | |
| C5 | O5 | sing | 1.43Å | 1.43Å | |
| C5 | H51 | sing | 1.09Å | 1.11Å | |
| C5 | H52 | sing | 1.09Å | 1.11Å | |
| O5 | P | sing | 1.61Å | 1.60Å | |
| P | O1P | doub | 1.48Å | 1.48Å | |
| P | O2P | sing | 1.61Å | 1.48Å | |
| P | O3P | sing | 1.61Å | 1.49Å | |
| O2P | HOP2 | sing | 0.97Å | 0.95Å | |
| O3P | HOP3 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1 | C1 | C2 | 119.2° | 109.5° |
| O1 | C1 | H11 | 108.7° | 109.4° |
| O1 | C1 | H12 | 108.7° | 109.5° |
| C1 | O1 | HO1 | 119.2° | 106.8° |
| C2 | C1 | H11 | 108.7° | 109.5° |
| C2 | C1 | H12 | 108.8° | 109.5° |
| C1 | C2 | O2 | 108.8° | 109.5° |
| C1 | C2 | C3 | 103.1° | 109.5° |
| C1 | C2 | HC2 | 120.9° | 109.5° |
| H11 | C1 | H12 | 101.3° | 109.5° |
| O2 | C2 | C3 | 124.4° | 109.5° |
| O2 | C2 | HC2 | 97.4° | 109.5° |
| C2 | O2 | HO2 | 108.8° | 106.8° |
| C3 | C2 | HC2 | 103.8° | 109.4° |
| C2 | C3 | O3 | 108.2° | 109.5° |
| C2 | C3 | C4 | 109.1° | 109.5° |
| C2 | C3 | HC3 | 113.5° | 109.5° |
| O3 | C3 | C4 | 116.8° | 109.4° |
| O3 | C3 | HC3 | 105.3° | 109.4° |
| C3 | O3 | HO3 | 108.1° | 106.7° |
| C4 | C3 | HC3 | 104.2° | 109.5° |
| C3 | C4 | O4 | 121.7° | 109.4° |
| C3 | C4 | C5 | 101.7° | 109.5° |
| C3 | C4 | HC4 | 106.0° | 109.5° |
| O4 | C4 | C5 | 106.4° | 109.5° |
| O4 | C4 | HC4 | 101.2° | 109.4° |
| C4 | O4 | HO4 | 121.7° | 106.8° |
| C5 | C4 | HC4 | 121.3° | 109.5° |
| C4 | C5 | O5 | 124.6° | 109.5° |
| C4 | C5 | H51 | 106.8° | 109.5° |
| C4 | C5 | H52 | 106.8° | 109.5° |
| O5 | C5 | H51 | 106.9° | 109.4° |
| O5 | C5 | H52 | 106.8° | 109.4° |
| C5 | O5 | P | 140.2° | 106.9° |
| H51 | C5 | H52 | 102.8° | 109.4° |
| O5 | P | O1P | 106.7° | 109.5° |
| O5 | P | O2P | 104.6° | 109.6° |
| O5 | P | O3P | 107.1° | 109.5° |
| O1P | P | O2P | 113.5° | 109.4° |
| O1P | P | O3P | 112.4° | 109.4° |
| O2P | P | O3P | 111.9° | 109.5° |
| P | O2P | HOP2 | 104.6° | 106.8° |
| P | O3P | HOP3 | 107.1° | 106.8° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1 | C1 | C2 | H11 | 125.2° | 119.9° |
| O1 | C1 | C2 | H12 | 125.2° | 120.0° |
| O1 | C1 | H11 | H12 | 114.4° | 120.0° |
| O1 | C1 | C2 | O2 | 126.5° | 60.0° |
| O1 | C1 | C2 | C3 | 99.8° | 180.0° |
| O1 | C1 | C2 | HC2 | 15.3° | 60.1° |
| C2 | C1 | H11 | H12 | 114.5° | 120.0° |
| C2 | C1 | O1 | HO1 | 180.0° | 180.0° |
| C1 | C2 | O2 | C3 | 121.4° | 120.0° |
| C1 | C2 | O2 | HC2 | 126.2° | 120.0° |
| C1 | C2 | C3 | HC2 | 126.8° | 120.0° |
| C1 | C2 | O2 | HO2 | 180.0° | 60.0° |
| C1 | C2 | C3 | O3 | 133.1° | 60.0° |
| C1 | C2 | C3 | C4 | 99.0° | 180.0° |
| C1 | C2 | C3 | HC3 | 16.7° | 60.0° |
| H11 | C1 | O1 | HO1 | 54.7° | 60.0° |
| H11 | C1 | C2 | O2 | 1.3° | 60.0° |
| H11 | C1 | C2 | C3 | 135.0° | 60.0° |
| H11 | C1 | C2 | HC2 | 109.9° | 180.0° |
| H12 | C1 | O1 | HO1 | 54.8° | 59.9° |
| H12 | C1 | C2 | O2 | 108.3° | 180.0° |
| H12 | C1 | C2 | C3 | 25.4° | 60.0° |
| H12 | C1 | C2 | HC2 | 140.5° | 60.0° |
| O2 | C2 | C3 | HC2 | 109.2° | 120.0° |
| O2 | C2 | C3 | O3 | 9.1° | 60.0° |
| O2 | C2 | C3 | C4 | 137.1° | 60.0° |
| O2 | C2 | C3 | HC3 | 107.3° | 180.0° |
| C3 | C2 | O2 | HO2 | 58.6° | 60.0° |
| C2 | C3 | O3 | C4 | 123.4° | 120.1° |
| C2 | C3 | O3 | HC3 | 121.6° | 120.0° |
| C2 | C3 | C4 | HC3 | 121.5° | 120.1° |
| C2 | C3 | O3 | HO3 | 180.0° | 60.0° |
| C2 | C3 | C4 | O4 | 40.8° | 60.0° |
| C2 | C3 | C4 | C5 | 158.7° | 180.0° |
| C2 | C3 | C4 | HC4 | 73.6° | 59.9° |
| HC2 | C2 | O2 | HO2 | 53.8° | 180.0° |
| HC2 | C2 | C3 | O3 | 100.1° | 180.0° |
| HC2 | C2 | C3 | C4 | 27.9° | 60.0° |
| HC2 | C2 | C3 | HC3 | 143.5° | 60.0° |
| O3 | C3 | C4 | HC3 | 115.6° | 119.9° |
| O3 | C3 | C4 | O4 | 163.7° | 180.0° |
| O3 | C3 | C4 | C5 | 78.4° | 59.9° |
| O3 | C3 | C4 | HC4 | 49.3° | 60.1° |
| C4 | C3 | O3 | HO3 | 56.6° | 60.0° |
| C3 | C4 | O4 | C5 | 115.5° | 120.1° |
| C3 | C4 | O4 | HC4 | 116.8° | 119.9° |
| C3 | C4 | C5 | HC4 | 117.1° | 120.0° |
| C3 | C4 | O4 | HO4 | 180.0° | 60.0° |
| C3 | C4 | C5 | O5 | 143.5° | 180.0° |
| C3 | C4 | C5 | H51 | 91.2° | 60.0° |
| C3 | C4 | C5 | H52 | 18.3° | 60.0° |
| HC3 | C3 | O3 | HO3 | 58.4° | 180.0° |
| HC3 | C3 | C4 | O4 | 80.7° | 60.1° |
| HC3 | C3 | C4 | C5 | 37.2° | 60.0° |
| HC3 | C3 | C4 | HC4 | 164.9° | 180.0° |
| O4 | C4 | C5 | HC4 | 114.6° | 120.0° |
| O4 | C4 | C5 | O5 | 15.2° | 60.0° |
| O4 | C4 | C5 | H51 | 140.5° | 180.0° |
| O4 | C4 | C5 | H52 | 110.0° | 60.0° |
| C5 | C4 | O4 | HO4 | 64.5° | 60.0° |
| C4 | C5 | O5 | H51 | 125.3° | 120.1° |
| C4 | C5 | O5 | H52 | 125.2° | 120.0° |
| C4 | C5 | H51 | H52 | 112.3° | 120.0° |
| C4 | C5 | O5 | P | 150.1° | 180.0° |
| HC4 | C4 | O4 | HO4 | 63.2° | 180.0° |
| HC4 | C4 | C5 | O5 | 99.4° | 60.0° |
| HC4 | C4 | C5 | H51 | 25.9° | 60.0° |
| HC4 | C4 | C5 | H52 | 135.4° | 180.0° |
| O5 | C5 | H51 | H52 | 112.3° | 119.9° |
| C5 | O5 | P | O1P | 78.9° | 60.0° |
| C5 | O5 | P | O2P | 160.5° | 180.0° |
| C5 | O5 | P | O3P | 41.7° | 60.0° |
| H51 | C5 | O5 | P | 24.9° | 60.0° |
| H52 | C5 | O5 | P | 84.7° | 59.9° |
| O5 | P | O1P | O2P | 114.6° | 120.1° |
| O5 | P | O1P | O3P | 117.1° | 120.0° |
| O5 | P | O2P | O3P | 115.6° | 120.0° |
| O5 | P | O2P | HOP2 | 180.0° | 179.9° |
| O5 | P | O3P | HOP3 | 180.0° | 60.0° |
| O1P | P | O2P | O3P | 128.5° | 119.9° |
| O1P | P | O2P | HOP2 | 64.1° | 60.0° |
| O1P | P | O3P | HOP3 | 63.1° | 180.0° |
| O2P | P | O3P | HOP3 | 65.9° | 60.1° |
| O3P | P | O2P | HOP2 | 64.4° | 59.9° |
