A5N
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O2 | C1 | doub | 1.21Å | 1.25Å | |
C1 | O3 | sing | 1.34Å | 1.28Å | |
C1 | OD1 | sing | 1.35Å | 1.38Å | |
OD1 | CG | sing | 1.35Å | 1.39Å | |
CG | ND2 | doub | 1.29Å | 1.34Å | |
CG | CB | sing | 1.51Å | 1.52Å | |
CB | CA | sing | 1.53Å | 1.54Å | |
CA | C | sing | 1.51Å | 1.54Å | |
CA | N | sing | 1.47Å | 1.46Å | |
C | O | doub | 1.21Å | 1.23Å | |
C | OXT | sing | 1.34Å | 1.46Å | |
O3 | H3 | sing | 0.97Å | 0.95Å | |
ND2 | HD2 | sing | 0.97Å | 1.00Å | |
CB | HB1C | sing | 1.09Å | 1.10Å | |
CB | HB2C | sing | 1.09Å | 1.10Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O2 | C1 | O3 | 124.5° | 120.0° |
O2 | C1 | OD1 | 115.3° | 120.0° |
O3 | C1 | OD1 | 120.1° | 120.0° |
C1 | O3 | H3 | 109.5° | 117.0° |
C1 | OD1 | CG | 117.3° | 117.0° |
OD1 | CG | ND2 | 123.2° | 120.0° |
OD1 | CG | CB | 122.6° | 120.1° |
ND2 | CG | CB | 114.2° | 120.0° |
CG | ND2 | HD2 | 110.2° | 120.0° |
CG | CB | CA | 109.8° | 109.5° |
CG | CB | HB1C | 109.4° | 109.5° |
CG | CB | HB2C | 109.3° | 109.4° |
CB | CA | C | 112.1° | 109.5° |
CB | CA | N | 109.2° | 109.5° |
CA | CB | HB1C | 109.3° | 109.5° |
CA | CB | HB2C | 109.3° | 109.5° |
CB | CA | HA | 106.7° | 109.4° |
C | CA | N | 105.9° | 109.5° |
CA | C | O | 124.5° | 119.9° |
CA | C | OXT | 118.2° | 120.1° |
C | CA | HA | 110.0° | 109.5° |
N | CA | HA | 112.9° | 109.4° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
O | C | OXT | 115.8° | 120.0° |
C | OXT | HXT | 109.5° | 117.0° |
HB1C | CB | HB2C | 109.8° | 109.4° |
H | N | H2 | 109.4° | 111.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O2 | C1 | O3 | OD1 | 177.7° | 179.8° |
O2 | C1 | OD1 | CG | 100.0° | 0.1° |
O2 | C1 | O3 | H3 | 0.0° | 0.0° |
O3 | C1 | OD1 | CG | 82.1° | 179.7° |
C1 | OD1 | CG | ND2 | 13.8° | 0.1° |
C1 | OD1 | CG | CB | 166.0° | 180.0° |
OD1 | C1 | O3 | H3 | 177.7° | 179.8° |
OD1 | CG | ND2 | CB | 179.8° | 179.9° |
OD1 | CG | CB | CA | 46.7° | 180.0° |
OD1 | CG | ND2 | HD2 | 180.0° | 180.0° |
OD1 | CG | CB | HB1C | 166.7° | 59.9° |
OD1 | CG | CB | HB2C | 73.1° | 60.0° |
ND2 | CG | CB | CA | 133.1° | 0.0° |
ND2 | CG | CB | HB1C | 13.1° | 120.0° |
ND2 | CG | CB | HB2C | 107.1° | 120.0° |
CG | CB | CA | HB1C | 120.0° | 120.0° |
CG | CB | CA | HB2C | 119.9° | 120.0° |
CG | CB | CA | C | 70.0° | 175.0° |
CG | CB | CA | N | 172.9° | 64.9° |
CB | CG | ND2 | HD2 | 0.2° | 0.0° |
CG | CB | HB1C | HB2C | 119.9° | 120.0° |
CG | CB | CA | HA | 50.5° | 55.0° |
CB | CA | C | N | 119.1° | 120.1° |
CB | CA | C | HA | 118.6° | 120.0° |
CB | CA | N | HA | 118.6° | 119.9° |
CB | CA | C | O | 111.6° | 100.0° |
CB | CA | C | OXT | 83.1° | 80.0° |
CA | CB | HB1C | HB2C | 119.9° | 120.0° |
CB | CA | N | H | 65.0° | 176.0° |
CB | CA | N | H2 | 175.0° | 60.1° |
C | CA | N | HA | 120.5° | 120.0° |
CA | C | O | OXT | 165.6° | 180.0° |
C | CA | CB | HB1C | 50.0° | 54.9° |
C | CA | CB | HB2C | 170.1° | 65.0° |
C | CA | N | H | 174.1° | 63.9° |
C | CA | N | H2 | 54.1° | 60.0° |
CA | C | OXT | HXT | 166.5° | 180.0° |
N | CA | C | O | 7.4° | 20.0° |
N | CA | C | OXT | 157.9° | 160.0° |
N | CA | CB | HB1C | 67.1° | 175.0° |
N | CA | CB | HB2C | 53.0° | 55.1° |
CA | N | H | H2 | 120.0° | 123.9° |
O | C | CA | HA | 129.7° | 140.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
OXT | C | CA | HA | 35.6° | 40.0° |
HB1C | CB | CA | HA | 170.5° | 65.1° |
HB2C | CB | CA | HA | 69.3° | 175.0° |
HA | CA | N | H | 53.6° | 56.1° |
HA | CA | N | H2 | 66.4° | 180.0° |