Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

A54

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.38Å1.38ÅAromatic
C1C6doub1.38Å1.38ÅAromatic
C2C3doub1.38Å1.37ÅAromatic
C3C4sing1.38Å1.38ÅAromatic
C4C5doub1.38Å1.38ÅAromatic
C4C7sing1.51Å1.50Å
C5C6sing1.38Å1.38ÅAromatic
C7C8sing1.53Å1.52Å
C7O11sing1.43Å1.44Å
C8C9sing1.53Å1.52Å
C9N10sing1.47Å1.46Å
O11C12sing1.36Å1.41Å
C12C13sing1.38Å1.39ÅAromatic
C12C17doub1.40Å1.38ÅAromatic
C13C14doub1.38Å1.38ÅAromatic
C14C15sing1.39Å1.38ÅAromatic
C14CL2sing1.74Å1.71Å
C15C16doub1.38Å1.38ÅAromatic
C16C17sing1.40Å1.38ÅAromatic
C17C18sing1.43Å1.43Å
C18N19trip1.14Å1.16Å
C1H1sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C3H3sing1.08Å1.08Å
C5H5sing1.08Å1.08Å
C7H7sing1.09Å1.10Å
C8H81Csing1.09Å1.10Å
C8H82Csing1.09Å1.10Å
C9H91Csing1.09Å1.10Å
C9H92Csing1.09Å1.10Å
N10H101sing1.01Å1.00Å
N10H102sing1.01Å1.00Å
C13H13sing1.08Å1.08Å
C15H15sing1.08Å1.08Å
C16H16sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C6121.2°120.0°
C1C2C3119.6°120.0°
C2C1H1119.4°120.0°
C1C2H2120.2°120.0°
C1C6C5118.7°120.0°
C6C1H1119.4°120.0°
C1C6H6120.6°120.0°
C2C3C4119.8°120.0°
C3C2H2120.2°120.0°
C2C3H3120.1°120.0°
C3C4C5119.9°120.0°
C3C4C7121.6°120.0°
C4C3H3120.1°120.0°
C5C4C7118.5°120.0°
C4C5C6120.6°120.0°
C4C5H5119.7°120.0°
C4C7C8110.4°109.4°
C4C7O11115.5°109.5°
C4C7H7104.0°109.5°
C5C6H6120.6°120.0°
C6C5H5119.7°120.0°
C8C7O11107.9°109.5°
C7C8C9112.6°109.5°
C8C7H7112.2°109.5°
C7C8H81C108.5°109.5°
C7C8H82C107.7°109.5°
C7O11C12117.9°117.0°
O11C7H7106.8°109.5°
C8C9N10110.0°109.5°
C9C8H81C108.4°109.4°
C9C8H82C107.7°109.5°
C8C9H91C109.3°109.5°
C8C9H92C109.2°109.4°
N10C9H91C109.3°109.5°
N10C9H92C109.2°109.5°
C9N10H101109.5°111.0°
C9N10H102109.5°111.0°
O11C12C13126.4°120.2°
O11C12C17114.4°120.1°
C13C12C17119.2°119.7°
C12C13C14119.2°120.1°
C12C13H13120.4°120.0°
C12C17C16121.1°119.6°
C12C17C18119.2°120.2°
C13C14C15121.8°120.3°
C13C14CL2120.1°119.9°
C14C13H13120.4°119.9°
C15C14CL2118.1°119.8°
C14C15C16118.8°120.3°
C14C15H15120.6°119.9°
C15C16C17119.9°119.9°
C16C15H15120.6°119.9°
C15C16H16120.1°120.0°
C16C17C18119.6°120.1°
C17C16H16120.0°120.1°
C17C18N19178.5°179.9°
H81CC8H82C112.0°109.5°
H91CC9H92C109.9°109.4°
H101N10H102109.4°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C6H1180.0°179.7°
C1C2C3H2180.0°180.0°
C1C2C3C41.1°0.0°
C2C1C6C50.2°0.0°
C2C1C6H6179.8°180.0°
C1C2C3H3178.9°180.0°
C6C1C2C30.8°0.0°
C1C6C5C40.9°0.0°
C1C6C5H6180.0°180.0°
C6C1C2H2179.2°180.0°
C1C6C5H5179.1°180.0°
C2C3C4H3180.0°180.0°
C2C3C4C50.4°0.0°
C2C3C4C7179.9°179.9°
C3C2C1H1179.2°179.7°
C3C4C5C7179.8°179.9°
C3C4C5C60.7°0.0°
C3C4C7C865.2°100.0°
C3C4C7O1157.4°140.0°
C4C3C2H2178.9°180.0°
C3C4C5H5179.3°180.0°
C3C4C7H7174.1°19.9°
C4C5C6H5180.0°180.0°
C5C4C7C8115.0°80.1°
C5C4C7O11122.3°39.9°
C4C5C6H6179.1°180.0°
C5C4C3H3179.6°180.0°
C5C4C7H75.6°160.0°
C7C4C5C6179.1°179.9°
C4C7C8O11127.0°120.0°
C4C7C8H7115.6°120.0°
C4C7O11H7115.1°120.1°
C4C7C8C968.8°175.0°
C4C7O11C1256.8°140.6°
C7C4C3H30.1°0.1°
C7C4C5H50.9°0.1°
C4C7C8H81C51.2°55.0°
C4C7C8H82C172.6°65.0°
C5C6C1H1179.8°179.7°
C8C7O11H7120.9°120.0°
C7C8C9H81C120.0°120.0°
C7C8C9H82C118.6°120.0°
C7C8C9N10148.5°180.0°
C8C7O11C12179.1°99.4°
C7C8H81CH82C118.7°120.1°
C7C8C9H91C91.5°60.0°
C7C8C9H92C28.7°60.0°
O11C7C8C9164.2°65.0°
C7O11C12C1322.0°5.7°
C7O11C12C17158.0°174.6°
O11C7C8H81C75.8°175.1°
O11C7C8H82C45.5°55.0°
C8C9N10H91C120.0°120.0°
C8C9N10H92C119.8°120.0°
C9C8C7H746.8°55.0°
C9C8H81CH82C118.7°120.0°
C8C9H91CH92C119.8°119.9°
C8C9N10H101175.5°56.0°
C8C9N10H10255.5°180.0°
N10C9C8H81C28.5°60.0°
N10C9C8H82C92.9°60.0°
N10C9H91CH92C119.8°120.0°
C9N10H101H102120.0°123.9°
O11C12C13C17179.9°179.7°
O11C12C13C14176.8°180.0°
O11C12C17C16177.3°179.8°
O11C12C17C180.1°0.0°
C12O11C7H758.3°20.6°
O11C12C13H133.2°0.1°
C12C13C14H13180.0°179.9°
C12C13C14C152.0°0.0°
C12C13C14CL2179.8°179.9°
C13C12C17C162.8°0.6°
C13C12C17C18180.0°179.7°
C17C12C13C143.3°0.3°
C12C17C16C150.8°0.5°
C12C17C16C18177.2°179.7°
C12C17C18N1917.7°10.5°
C17C12C13H13176.7°179.8°
C12C17C16H16179.2°179.7°
C13C14C15CL2178.3°180.0°
C13C14C15C160.0°0.0°
C13C14C15H15180.0°180.0°
C14C15C16H15180.0°180.0°
C14C15C16C170.6°0.3°
C15C14C13H13178.1°179.9°
C14C15C16H16179.3°180.0°
CL2C14C15C16178.3°180.0°
CL2C14C13H130.2°0.0°
CL2C14C15H151.8°0.1°
C15C16C17H16180.0°179.8°
C15C16C17C18178.0°179.7°
C16C17C18N19159.6°169.7°
C17C16C15H15179.4°179.7°
C18C17C16H162.0°0.0°
H1C1C2H20.8°0.3°
H1C1C6H60.2°0.3°
H2C2C3H31.1°0.0°
H6C6C5H50.9°0.0°
H7C7C8H81C166.8°65.0°
H7C7C8H82C71.9°175.0°
H81CC8C9H91C148.4°179.9°
H81CC8C9H92C91.4°60.0°
H82CC8C9H91C27.1°60.1°
H82CC8C9H92C147.3°180.0°
H91CC9N10H10164.5°64.0°
H91CC9N10H102175.5°60.0°
H92CC9N10H10155.7°176.0°
H92CC9N10H10264.3°60.0°
H15C15C16H160.7°0.1°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon