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A52

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
BO1sing1.37Å1.48Å
BC12sing1.55Å1.51Å
BO2'sing1.37Å1.44Å
BO3'sing1.37Å1.43Å
PO1Psing1.57Å1.50Å
PO2Pdoub1.57Å1.50Å
PO3Psing1.57Å1.51Å
PO5'sing1.61Å1.60Å
N1C2doub1.32Å1.35ÅAromatic
N1C6sing1.33Å1.35ÅAromatic
O1C10sing1.44Å1.44Å
C2N3sing1.32Å1.34ÅAromatic
N3C4doub1.33Å1.36ÅAromatic
C4C5sing1.40Å1.39ÅAromatic
C4N9sing1.37Å1.33ÅAromatic
C5C6doub1.41Å1.39ÅAromatic
C5N7sing1.36Å1.35ÅAromatic
C6N6sing1.38Å1.36Å
N7C8doub1.30Å1.35ÅAromatic
C8N9sing1.36Å1.35ÅAromatic
N9C1'sing1.47Å1.50Å
C1'C2'sing1.54Å1.52Å
C1'O4'sing1.44Å1.42Å
C10C11sing1.51Å1.48Å
C10C33sing1.53Å1.53Å
C11C12doub1.39Å1.38ÅAromatic
C11C13sing1.38Å1.40ÅAromatic
C12C16sing1.38Å1.40ÅAromatic
C13C14doub1.38Å1.39ÅAromatic
C14C15sing1.38Å1.39ÅAromatic
C15C16doub1.39Å1.40ÅAromatic
C16O35sing1.36Å1.36Å
C2'O2'sing1.44Å1.43Å
C2'C3'sing1.56Å1.51Å
C3'O3'sing1.45Å1.43Å
C3'C4'sing1.54Å1.53Å
C33N34sing1.47Å1.47Å
O35C36sing1.43Å1.43Å
C36C37sing1.53Å1.51Å
C4'O4'sing1.44Å1.43Å
C4'C5'sing1.53Å1.51Å
C5'O5'sing1.43Å1.43Å
C2H2sing1.08Å1.08Å
N6HN6sing0.97Å1.00Å
N6HN6Asing0.97Å1.00Å
C8H8sing1.08Å1.08Å
C1'H1'sing1.09Å1.10Å
C10H10sing1.09Å1.10Å
C13H13sing1.08Å1.08Å
C14H14sing1.08Å1.08Å
C15H15sing1.08Å1.08Å
C2'H2'sing1.09Å1.10Å
C3'H3'sing1.09Å1.10Å
C33H33sing1.09Å1.10Å
C33H33Asing1.09Å1.10Å
N34HN34sing1.01Å1.00Å
N34HN3Asing1.01Å1.00Å
C36H36sing1.09Å1.10Å
C36H36Asing1.09Å1.10Å
C37H37sing1.09Å1.10Å
C37H37Asing1.09Å1.10Å
C37H37Bsing1.09Å1.10Å
C4'H4'sing1.09Å1.10Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1BC1298.7°106.6°
O1BO2'107.2°110.6°
O1BO3'107.3°110.6°
BO1C10114.1°106.0°
C12BO2'117.3°110.8°
C12BO3'121.0°110.8°
BC12C11112.0°106.0°
BC12C16129.0°133.9°
O2'BO3'104.1°107.4°
BO2'C2'110.7°105.0°
BO3'C3'110.6°105.0°
O1PPO2P116.3°109.5°
O1PPO3P112.5°109.5°
O1PPO5'104.0°109.5°
O2PPO3P113.5°109.5°
O2PPO5'104.4°109.5°
O3PPO5'104.5°109.5°
PO5'C5'120.7°123.0°
C2N1C6121.3°121.2°
N1C2N3121.9°122.5°
N1C2H2119.0°118.8°
N1C6C5118.4°118.4°
N1C6N6120.8°120.8°
O1C10C11102.3°106.5°
O1C10C33108.8°110.0°
O1C10H10112.3°110.0°
C2N3C4118.4°120.6°
N3C2H2119.0°118.7°
N3C4C5120.9°119.1°
N3C4N9131.6°134.9°
C5C4N9107.5°106.0°
C4C5C6119.1°118.2°
C4C5N7107.7°107.1°
C4N9C8108.0°107.4°
C4N9C1'123.9°126.3°
C6C5N7133.2°134.7°
C5C6N6120.8°120.8°
C5N7C8107.2°109.4°
C6N6HN6109.5°120.0°
C6N6HN6A109.5°120.0°
N7C8N9109.5°110.0°
N7C8H8125.2°125.0°
C8N9C1'128.0°126.3°
N9C8H8125.2°125.0°
N9C1'C2'110.3°110.3°
N9C1'O4'113.4°110.4°
N9C1'H1'108.9°110.3°
C2'C1'O4'105.4°105.0°
C1'C2'O2'109.9°108.6°
C1'C2'C3'105.1°103.8°
C2'C1'H1'108.6°110.3°
C1'C2'H2'112.4°113.1°
C1'O4'C4'110.5°105.3°
O4'C1'H1'110.0°110.4°
C11C10C33110.7°110.1°
C10C11C12110.2°106.4°
C10C11C13126.5°133.5°
C11C10H10111.6°110.1°
C10C33N34111.5°109.5°
C33C10H10110.9°110.1°
C10C33H33109.0°109.5°
C10C33H33A109.0°109.5°
C12C11C13123.3°120.1°
C11C12C16119.0°120.0°
C11C13C14117.6°120.0°
C11C13H13121.2°120.0°
C12C16C15118.6°119.7°
C12C16O35120.6°120.1°
C13C14C15119.7°120.1°
C14C13H13121.2°120.0°
C13C14H14120.1°119.9°
C14C15C16121.7°120.0°
C15C14H14120.1°120.0°
C14C15H15119.1°120.0°
C15C16O35120.7°120.1°
C16C15H15119.2°120.0°
C16O35C36120.5°117.0°
O2'C2'C3'102.1°103.1°
O2'C2'H2'114.0°113.2°
C2'C3'O3'104.2°103.1°
C2'C3'C4'103.4°103.8°
C3'C2'H2'112.6°114.1°
C2'C3'H3'111.4°113.4°
O3'C3'C4'113.3°108.6°
O3'C3'H3'112.7°113.2°
C3'C4'O4'107.8°104.9°
C3'C4'C5'111.8°110.3°
C4'C3'H3'111.2°113.8°
C3'C4'H4'109.2°110.3°
N34C33H33109.0°109.5°
N34C33H33A109.0°109.5°
C33N34HN34109.5°111.0°
C33N34HN3A109.5°111.0°
O35C36C37109.5°109.5°
O35C36H36109.5°109.4°
O35C36H36A109.5°109.5°
C37C36H36109.5°109.5°
C37C36H36A109.5°109.5°
C36C37H37109.5°109.5°
C36C37H37A109.5°109.5°
C36C37H37B109.5°109.5°
O4'C4'C5'108.0°110.4°
O4'C4'H4'110.5°110.3°
C4'C5'O5'107.9°109.5°
C5'C4'H4'109.5°110.4°
C4'C5'H5'109.8°109.5°
C4'C5'H5'A109.9°109.4°
O5'C5'H5'109.8°109.5°
O5'C5'H5'A109.8°109.5°
HN6N6HN6A109.5°120.0°
H33C33H33A109.5°109.4°
HN34N34HN3A109.5°111.0°
H36C36H36A109.5°109.5°
H37C37H37A109.4°109.5°
H37C37H37B109.5°109.5°
H37AC37H37B109.5°109.4°
H5'C5'H5'A109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1BC12O2'114.6°120.4°
O1BC12O3'116.3°120.4°
O1BO2'O3'113.5°120.7°
BO1C10C1116.6°28.7°
BO1C10C33100.5°148.0°
O1BC12C119.8°17.5°
O1BC12C16171.9°162.4°
O1BO2'C2'98.2°80.3°
O1BO3'C3'117.5°80.3°
BO1C10H10136.3°90.6°
C12BO2'O3'136.7°121.2°
C12BO1C1016.4°28.2°
BC12C11C100.6°0.3°
BC12C11C16178.5°179.9°
BC12C11C13179.6°179.6°
BC12C16C15179.0°179.7°
BC12C16O351.3°0.3°
C12BO2'C2'152.0°161.7°
C12BO3'C3'130.6°161.7°
O2'BO1C10105.8°148.8°
BO2'C2'C1'138.1°132.9°
O2'BC12C11104.8°138.0°
O2'BC12C1673.5°42.0°
BO2'C2'C3'27.0°23.2°
O2'BO3'C3'4.0°40.5°
BO2'C2'H2'94.7°100.5°
O3'BO1C10142.9°92.4°
O3'BC12C11126.1°102.9°
O3'BC12C1655.5°77.2°
O3'BO2'C2'15.3°40.5°
BO3'C3'C2'20.2°23.3°
BO3'C3'C4'91.5°133.0°
BO3'C3'H3'141.1°99.7°
O1PPO2PO3P132.9°120.0°
O1PPO2PO5'113.9°120.0°
O1PPO3PO5'112.2°120.0°
O1PPO5'C5'53.2°65.0°
O2PPO3PO5'113.1°120.0°
O2PPO5'C5'175.5°55.0°
O3PPO5'C5'65.0°175.0°
PO5'C5'C4'159.4°180.0°
PO5'C5'H5'39.6°60.0°
PO5'C5'H5'A80.9°60.0°
N1C2N3H2180.0°180.0°
N1C2N3C40.5°0.1°
C2N1C6C51.2°0.0°
C2N1C6N6179.3°180.0°
C6N1C2N31.2°0.1°
N1C6C5C40.8°0.0°
N1C6C5N6179.4°179.9°
N1C6C5N7179.8°180.0°
C6N1C2H2178.8°180.0°
N1C6N6HN60.0°0.1°
N1C6N6HN6A120.0°180.0°
O1C10C11C33115.7°119.3°
O1C10C11H10120.2°119.2°
O1C10C33H10124.0°121.4°
O1C10C11C129.3°17.2°
O1C10C11C13170.6°162.7°
O1C10C33N3454.6°66.5°
O1C10C33H3365.7°173.5°
O1C10C33H33A174.9°53.6°
C2N3C4C50.1°0.1°
C2N3C4N9179.7°180.0°
N3C4C5N9179.8°180.0°
N3C4C5C60.2°0.1°
N3C4C5N7179.4°180.0°
N3C4N9C8179.6°180.0°
N3C4N9C1'1.9°0.1°
C4N3C2H2179.4°180.0°
C4C5C6N7179.0°180.0°
C4C5C6N6179.8°180.0°
C4C5N7C80.5°0.0°
C5C4N9C80.2°0.0°
C5C4N9C1'177.9°180.0°
N9C4C5C6179.6°180.0°
N9C4C5N70.4°0.0°
C4N9C8N70.1°0.0°
C4N9C8C1'177.7°179.9°
C4N9C1'C2'145.0°85.0°
C4N9C1'O4'97.0°159.4°
C4N9C8H8179.9°180.0°
C4N9C1'H1'25.9°37.1°
C6C5N7C8179.5°179.9°
C5C6N6HN6179.4°180.0°
C5C6N6HN6A59.4°0.1°
N7C5C6N60.8°0.1°
C5N7C8N90.4°0.0°
C5N7C8H8179.6°180.0°
C6N6HN6HN6A120.0°179.9°
N7C8N9H8180.0°180.0°
N7C8N9C1'177.5°180.0°
C8N9C1'C2'32.3°95.1°
C8N9C1'O4'85.7°20.5°
C8N9C1'H1'151.4°142.8°
N9C1'C2'O4'122.8°118.9°
N9C1'C2'H1'119.3°122.1°
N9C1'O4'H1'122.3°122.2°
N9C1'C2'O2'156.5°107.7°
N9C1'C2'C3'94.4°143.0°
N9C1'O4'C4'99.1°159.7°
C1'N9C8H82.5°0.1°
N9C1'C2'H2'28.4°18.9°
C2'C1'O4'H1'116.9°118.9°
C1'C2'O2'C3'111.1°109.7°
C1'C2'O2'H2'127.2°126.6°
C1'C2'C3'H2'122.7°123.6°
C1'C2'C3'O3'142.6°113.3°
C1'C2'C3'C4'23.9°0.0°
C2'C1'O4'C4'21.7°40.8°
C1'C2'C3'H3'95.6°124.0°
O4'C1'C2'O2'80.7°133.3°
O4'C1'C2'C3'28.4°24.1°
C1'O4'C4'C3'6.4°40.8°
C1'O4'C4'C5'114.5°159.7°
O4'C1'C2'H2'151.2°100.0°
C1'O4'C4'H4'125.7°78.0°
C11C10C33H10124.4°121.5°
C10C11C12C13179.8°180.0°
C10C11C12C16179.1°179.7°
C10C11C13C14178.9°179.8°
C11C10C33N3457.0°176.5°
C10C11C13H131.1°0.2°
C11C10C33H33177.3°56.4°
C11C10C33H33A63.3°63.5°
C33C10C11C12106.5°136.5°
C33C10C11C1373.7°43.5°
C10C33N34H33120.3°120.0°
C10C33N34H33A120.3°120.0°
C10C33H33H33A119.1°119.9°
C10C33N34HN34180.0°56.0°
C10C33N34HN3A60.0°180.0°
C12C11C13C141.2°0.2°
C11C12C16C150.8°0.2°
C11C12C16O35179.6°179.8°
C12C11C10H10129.5°102.0°
C12C11C13H13178.8°179.8°
C13C11C12C161.0°0.3°
C11C13C14H13180.0°180.0°
C11C13C14C151.2°0.0°
C13C11C10H1050.3°78.0°
C11C13C14H14178.8°180.0°
C12C16C15C140.8°0.0°
C12C16C15O35179.6°180.0°
C12C16O35C36179.8°180.0°
C12C16C15H15179.2°180.0°
C13C14C15H14180.0°179.9°
C13C14C15C161.1°0.1°
C13C14C15H15178.9°179.9°
C14C15C16H15180.0°180.0°
C14C15C16O35179.5°180.0°
C15C14C13H13178.8°180.0°
C15C16O35C360.2°0.0°
C16C15C14H14178.9°180.0°
C16O35C36C37177.5°180.0°
O35C16C15H150.5°0.0°
C16O35C36H3657.5°60.0°
C16O35C36H36A62.5°60.0°
O2'C2'C3'H2'122.6°123.2°
O2'C2'C3'O3'27.9°0.0°
O2'C2'C3'C4'90.8°113.3°
O2'C2'C1'H1'37.1°14.4°
O2'C2'C3'H3'149.7°122.7°
C2'C3'O3'C4'111.7°109.7°
C2'C3'O3'H3'120.9°122.9°
C2'C3'C4'H3'119.7°123.8°
C2'C3'C4'O4'11.6°24.1°
C2'C3'C4'C5'130.1°143.0°
C3'C2'C1'H1'146.3°94.9°
C2'C3'C4'H4'108.6°94.7°
O3'C3'C4'H3'128.1°127.0°
O3'C3'C4'O4'123.7°133.3°
O3'C3'C4'C5'117.7°107.8°
O3'C3'C2'H2'94.7°123.2°
O3'C3'C4'H4'3.6°14.5°
C3'C4'O4'C5'120.9°118.9°
C3'C4'O4'H4'119.3°118.9°
C3'C4'C5'H4'121.1°122.2°
C3'C4'C5'O5'177.9°175.0°
C4'C3'C2'H2'146.6°123.6°
C3'C4'C5'H5'62.3°54.9°
C3'C4'C5'H5'A58.2°65.0°
N34C33C10H10178.5°55.0°
N34C33H33H33A119.1°120.0°
C33N34HN34HN3A120.0°124.0°
O35C36C37H36120.0°120.0°
O35C36C37H36A120.0°120.0°
O35C36H36H36A120.0°120.0°
O35C36C37H37180.0°180.0°
O35C36C37H37A60.0°60.0°
O35C36C37H37B60.0°60.0°
C37C36H36H36A120.0°120.0°
C36C37H37H37A120.0°120.0°
C36C37H37H37B120.0°120.0°
C36C37H37AH37B120.0°120.0°
O4'C4'C5'H4'120.4°122.3°
O4'C4'C5'O5'59.5°69.5°
C4'O4'C1'H1'138.6°78.0°
O4'C4'C3'H3'108.1°99.7°
O4'C4'C5'H5'179.2°170.5°
O4'C4'C5'H5'A60.2°50.5°
C4'C5'O5'H5'119.7°120.0°
C4'C5'O5'H5'A119.8°120.0°
C5'C4'C3'H3'10.5°19.2°
C4'C5'H5'H5'A120.7°119.9°
O5'C5'C4'H4'60.9°52.8°
O5'C5'H5'H5'A120.7°120.1°
H1'C1'C2'H2'90.9°141.0°
H10C10C33H3358.3°65.1°
H10C10C33H33A61.1°175.0°
H13C13C14H141.2°0.1°
H14C14C15H151.1°0.0°
H2'C2'C3'H3'27.1°0.4°
H3'C3'C4'H4'131.8°141.5°
H33C33N34HN3459.7°64.0°
H33C33N34HN3A179.7°59.9°
H33AC33N34HN3459.7°176.0°
H33AC33N34HN3A60.3°60.0°
H36C36C37H3760.0°60.0°
H36C36C37H37A180.0°179.9°
H36C36C37H37B60.0°60.0°
H36AC36C37H3760.0°60.0°
H36AC36C37H37A60.0°60.0°
H36AC36C37H37B180.0°180.0°
H37C37H37AH37B120.0°120.0°
H4'C4'C5'H5'58.8°67.3°
H4'C4'C5'H5'A179.3°172.8°

222624

PDB entries from 2024-07-17

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