Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

A4A

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
H2C2sing1.09Å1.10Å
O1C2sing1.44Å1.43Å
C2O2sing1.44Å1.43Å
C2H2Asing1.09Å1.10Å
C31C4doub1.39Å1.43ÅAromatic
H4C4sing1.08Å1.08Å
C4C53sing1.39Å1.42ÅAromatic
C53C6sing1.47Å1.41Å
O6C6doub1.22Å1.23Å
C6N6sing1.36Å1.40Å
C51N6sing1.39Å1.39Å
N6HN6sing0.97Å1.00Å
C51C7doub1.36Å1.44ÅAromatic
C12C7sing1.42Å1.42ÅAromatic
C7H7sing1.08Å1.08Å
C12C8sing1.41Å1.42ÅAromatic
C9C8doub1.36Å1.40ÅAromatic
C8H8sing1.08Å1.08Å
C10C9sing1.39Å1.40ÅAromatic
C9H9sing1.08Å1.08Å
C11C10doub1.37Å1.40ÅAromatic
H10C10sing1.08Å1.08Å
H11C11sing1.08Å1.08Å
C11C13sing1.39Å1.42ÅAromatic
C13C12doub1.42Å1.44ÅAromatic
C33C13sing1.46Å1.42ÅAromatic
O1C31sing1.37Å1.38Å
C31C32sing1.40Å1.43ÅAromatic
O2C32sing1.36Å1.37Å
C32C33doub1.40Å1.45ÅAromatic
C33C52sing1.39Å1.43ÅAromatic
C52C51sing1.40Å1.39ÅAromatic
C53C52doub1.40Å1.40ÅAromatic
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
H2C2O1109.7°110.7°
H2C2O2109.7°110.6°
H2C2H2A109.3°110.5°
O1C2O2108.9°103.6°
O1C2H2A109.7°110.6°
C2O1C31104.4°105.6°
O2C2H2A109.7°110.6°
C2O2C32104.9°105.6°
C31C4H4120.7°120.1°
C31C4C53118.6°119.9°
C4C31O1129.4°129.8°
C4C31C32120.7°122.1°
H4C4C53120.7°120.0°
C4C53C6134.1°138.4°
C4C53C52119.0°117.2°
C53C6O6129.0°125.9°
C53C6N6107.3°108.2°
C6C53C52107.0°104.4°
O6C6N6123.6°125.9°
C6N6C51109.2°110.3°
C6N6HN6125.4°124.8°
C51N6HN6125.4°124.9°
N6C51C7133.7°135.6°
N6C51C52106.8°106.6°
C51C7C12117.9°121.0°
C51C7H7121.0°119.5°
C7C51C52119.5°117.8°
C12C7H7121.1°119.5°
C7C12C8119.7°120.0°
C7C12C13121.3°121.5°
C12C8C9120.8°120.0°
C12C8H8119.6°119.9°
C8C12C13118.9°118.5°
C9C8H8119.6°120.0°
C8C9C10120.2°121.0°
C8C9H9119.9°119.4°
C10C9H9119.9°119.5°
C9C10C11120.4°120.6°
C9C10H10119.8°119.7°
C11C10H10119.8°119.7°
C10C11H11119.6°120.1°
C10C11C13120.7°119.8°
H11C11C13119.7°120.1°
C11C13C12118.9°120.0°
C11C13C33120.4°122.1°
C12C13C33120.7°117.8°
C13C33C32129.9°125.8°
C13C33C52116.1°116.4°
O1C31C32109.5°108.2°
C31C32O2108.7°108.9°
C31C32C33121.9°119.0°
O2C32C33129.1°132.1°
C32C33C52114.0°117.7°
C33C52C51124.4°125.5°
C33C52C53125.8°124.1°
C51C52C53109.8°110.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
H2C2O1O2120.0°118.6°
H2C2O1H2A120.0°122.9°
H2C2O2H2A120.0°122.8°
H2C2O1C31101.3°91.2°
H2C2O2C32101.4°91.3°
O1C2O2H2A120.0°118.6°
C2O1C31C4175.9°162.5°
C2O1C31C3211.7°17.4°
O1C2O2C3218.6°27.4°
O2C2O1C3118.8°27.4°
C2O2C32C3111.1°17.5°
C2O2C32C33176.0°162.6°
H2AC2O1C31138.8°145.9°
H2AC2O2C32138.6°145.9°
C31C4H4C53180.0°179.9°
C31C4C53C6179.3°179.9°
C4C31O1C32172.4°179.9°
C4C31C32O2173.6°179.9°
C4C31C32C330.0°0.1°
C31C4C53C520.3°0.1°
H4C4C53C60.7°0.1°
H4C4C31O18.6°0.3°
H4C4C31C32179.8°179.9°
H4C4C53C52179.7°179.8°
C4C53C6C52179.6°180.0°
C4C53C6O62.6°0.0°
C4C53C6N6179.4°179.9°
C53C4C31O1171.4°179.8°
C53C4C31C320.2°0.0°
C4C53C52C330.0°0.0°
C4C53C52C51179.7°180.0°
C53C6O6N6176.3°179.9°
C53C6N6C510.3°0.2°
C53C6N6HN6179.7°179.8°
C6C53C52C33179.6°180.0°
C6C53C52C510.0°0.0°
O6C6N6C51177.3°179.9°
O6C6N6HN62.6°0.1°
O6C6C53C52177.0°179.9°
C6N6C51HN6180.0°180.0°
C6N6C51C7179.8°179.9°
C6N6C51C520.3°0.1°
N6C6C53C520.2°0.1°
N6C51C7C52179.4°179.9°
N6C51C7C12179.1°180.0°
N6C51C7H70.9°0.0°
N6C51C52C33179.5°179.9°
N6C51C52C530.2°0.1°
HN6N6C51C70.2°0.1°
HN6N6C51C52179.7°179.8°
C51C7C12H7180.0°180.0°
C51C7C12C8179.5°180.0°
C51C7C12C130.5°0.0°
C7C51C52C330.1°0.0°
C7C51C52C53179.7°180.0°
C7C12C8C13179.0°179.9°
C7C12C8C9179.8°179.9°
C7C12C8H80.2°0.2°
C7C12C13C11179.7°179.9°
C7C12C13C330.5°0.2°
C12C7C51C520.3°0.1°
H7C7C12C80.5°0.0°
H7C7C12C13179.5°180.0°
H7C7C51C52179.7°179.9°
C12C8C9H8180.0°180.0°
C12C8C9C100.6°0.1°
C12C8C9H9179.3°179.9°
C8C12C13C110.7°0.2°
C8C12C13C33179.5°179.8°
C8C9C10H9180.0°180.0°
C8C9C10C110.5°0.1°
C8C9C10H10179.5°179.9°
C9C8C12C130.7°0.2°
H8C8C9C10179.4°179.9°
H8C8C9H90.7°0.1°
H8C8C12C13179.3°179.8°
C9C10C11H10180.0°180.0°
C9C10C11H11179.5°180.0°
C9C10C11C130.5°0.0°
H9C9C10C11179.5°179.9°
H9C9C10H100.5°0.1°
C10C11H11C13180.0°180.0°
C10C11C13C120.6°0.1°
C10C11C13C33179.6°179.9°
H10C10C11H110.5°0.1°
H10C10C11C13179.5°179.9°
H11C11C13C12179.4°179.9°
H11C11C13C330.4°0.1°
C11C13C12C33179.7°180.0°
C11C13C33C320.7°0.2°
C11C13C33C52179.9°179.7°
C12C13C33C32179.1°179.8°
C12C13C33C520.3°0.3°
C13C33C32C31179.6°179.8°
C13C33C32O27.5°0.2°
C13C33C32C52179.4°179.9°
C13C33C52C510.1°0.2°
C13C33C52C53179.7°179.8°
O1C31C32O20.4°0.0°
O1C31C32C33173.2°180.0°
C31C32O2C33173.0°180.0°
C31C32C33C520.2°0.2°
O2C32C33C52172.0°179.9°
C32C33C52C51179.4°179.8°
C32C33C52C530.2°0.1°
C33C52C51C53179.6°179.9°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon